Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/stride/1biv.std.txt Дата изменения: Mon Oct 1 22:36:22 2012 Дата индексирования: Tue Oct 2 11:44:54 2012 Кодировка:

REM -------------------------------------------------------------------- 1BIV
REM 1BIV
REM STRIDE: Knowledge-based secondary structure assignment 1BIV
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 1BIV
REM 1BIV
REM Residue accessible surface area calculation 1BIV
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 1BIV
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 1BIV
REM 1BIV
REM ------------------------ General information ----------------------- 1BIV
REM 1BIV
HDR VIRAL PROTEIN/RNA 12-JUN-96 1BIV 1BIV
CMP MOL_ID: 1; 1BIV
CMP MOLECULE: BOVINE IMMUNODEFICIENCY VIRUS TAR RNA; 1BIV
CMP CHAIN: A; 1BIV
CMP ENGINEERED: YES; 1BIV
CMP MOL_ID: 2; 1BIV
CMP MOLECULE: BOVINE IMMUNODEFICIENCY VIRUS TAT PEPTIDE; 1BIV
CMP CHAIN: B; 1BIV
CMP FRAGMENT: RESIDUES 65 - 81 OF THE TAT PROTEIN; 1BIV
CMP ENGINEERED: YES 1BIV
SRC MOL_ID: 1; 1BIV
SRC SYNTHETIC: YES; 1BIV
SRC MOL_ID: 2; 1BIV
SRC ORGANISM_SCIENTIFIC: BOVINE IMMUNODEFICIENCY VIRUS; 1BIV
SRC ORGANISM_TAXID: 11657 1BIV
AUT X.YE,R.A.KUMAR,D.J.PATEL 1BIV
REM 1BIV
REM -------------------- Secondary structure summary ------------------- 1BIV
REM 1BIV
CHN /data/npidb/pdb/pdb_new/all/pdb1biv.pdb B 1BIV
REM 1BIV
REM . 1BIV
SEQ 1 SGPRPRGTRGKGRRIRR 17 1BIV
STR TTTTT BTTTTTB 1BIV
REM 1BIV
REM 1BIV
REM 1BIV
LOC TurnIV SER 65 B ARG 68 B 1BIV
LOC TurnIV GLY 66 B PRO 69 B 1BIV
LOC TurnIV ARG 73 B GLY 76 B 1BIV
LOC TurnIV GLY 74 B ARG 77 B 1BIV
REM 1BIV
REM --------------- Detailed secondary structure assignment------------- 1BIV
REM 1BIV
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 1BIV
ASG SER B 65 1 T Turn 360.00 152.16 108.1 1BIV
ASG GLY B 66 2 T Turn -124.48 -125.25 53.6 1BIV
ASG PRO B 67 3 T Turn -94.05 -20.67 149.8 1BIV
ASG ARG B 68 4 T Turn -98.14 -160.09 198.3 1BIV
ASG PRO B 69 5 T Turn -64.94 -149.52 68.0 1BIV
ASG ARG B 70 6 C Coil -82.28 143.04 135.8 1BIV
ASG GLY B 71 7 C Coil -80.73 -41.07 38.5 1BIV
ASG THR B 72 8 B Bridge -161.18 167.61 55.1 1BIV
ASG ARG B 73 9 T Turn -101.32 42.61 127.7 1BIV
ASG GLY B 74 10 T Turn 75.30 -10.10 63.7 1BIV
ASG LYS B 75 11 T Turn -133.55 63.40 183.2 1BIV
ASG GLY B 76 12 T Turn 64.59 -11.65 60.0 1BIV
ASG ARG B 77 13 T Turn -63.04 57.09 130.8 1BIV
ASG ARG B 78 14 B Bridge -56.47 133.98 188.7 1BIV
ASG ILE B 79 15 C Coil -99.07 155.19 38.5 1BIV
ASG ARG B 80 16 C Coil 86.13 71.24 160.1 1BIV
ASG ARG B 81 17 C Coil -88.83 360.00 218.6 1BIV