Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.ru/npidb/pdb/pdb_new/stride/4hp3.std.txt Дата изменения: Wed Dec 19 12:43:17 2012 Дата индексирования: Mon Feb 4 00:43:23 2013 Кодировка: Поисковые слова: m 81

REM -------------------------------------------------------------------- 4HP3
REM 4HP3
REM STRIDE: Knowledge-based secondary structure assignment 4HP3
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 4HP3
REM 4HP3
REM Residue accessible surface area calculation 4HP3
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 4HP3
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 4HP3
REM 4HP3
REM ------------------------ General information ----------------------- 4HP3
REM 4HP3
HDR DNA BINDING PROTEIN/DNA 23-OCT-12 4HP3 4HP3
CMP MOL_ID: 1; 4HP3
CMP MOLECULE: DNA (5'-D(*GP*CP*CP*AP*AP*CP*GP*TP*TP*GP*GP*C)-3') 4HP3
CMP CHAIN: A, B; 4HP3
CMP ENGINEERED: YES; 4HP3
CMP MOL_ID: 2; 4HP3
CMP MOLECULE: LOC100036628 PROTEIN; 4HP3
CMP CHAIN: C; 4HP3
CMP ENGINEERED: YES 4HP3
SRC MOL_ID: 1; 4HP3
SRC SYNTHETIC: YES; 4HP3
SRC MOL_ID: 2; 4HP3
SRC ORGANISM_SCIENTIFIC: XENOPUS (SILURANA) TROPICALIS; 4HP3
SRC ORGANISM_COMMON: WESTERN CLAWED FROG; 4HP3
SRC ORGANISM_TAXID: 8364; 4HP3
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 4HP3
SRC EXPRESSION_SYSTEM_TAXID: 511693; 4HP3
SRC EXPRESSION_SYSTEM_STRAIN: BL21-V2R-PRARE2; 4HP3
SRC EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; 4HP3
SRC EXPRESSION_SYSTEM_PLASMID: PET28-MHL 4HP3
AUT X.CHAO,W.TEMPEL,C.BIAN,C.BOUNTRA,C.H.ARROWSMITH,A.M.EDWARDS,J 4HP3
AUT STRUCTURAL GENOMICS CONSORTIUM (SGC) 4HP3
REM 4HP3
REM -------------------- Secondary structure summary ------------------- 4HP3
REM 4HP3
CHN /data/npidb/pdb/pdb_new/all/pdb4hp3.pdb C 4HP3
REM 4HP3
REM . . . . . 4HP3
SEQ 1 NKKRKRCGVCVPCLRKEPCGACYNCVNRSTSHQICKMRKCEQLKKKRVVP 50 4HP3
STR TTTTHHHH TTTTHHHHHHHHH TTTTTTTTTTT TTTT 4HP3
REM 4HP3
REM 4HP3
SEQ 51 M 51 4HP3
STR 4HP3
REM 4HP3
REM 4HP3
REM 4HP3
LOC AlphaHelix VAL 69 C LEU 72 C 4HP3
LOC AlphaHelix TYR 81 C SER 89 C 4HP3
LOC TurnIV CYS 65 C CYS 68 C 4HP3
LOC TurnIV CYS 77 C CYS 80 C 4HP3
LOC TurnI CYS 93 C ARG 96 C 4HP3
LOC TurnI LYS 94 C LYS 97 C 4HP3
LOC TurnI CYS 98 C LEU 101 C 4HP3
LOC TurnI GLU 99 C LYS 102 C 4HP3
LOC TurnI GLN 100 C LYS 103 C 4HP3
LOC TurnVIII ARG 105 C PRO 108 C 4HP3
REM 4HP3
REM --------------- Detailed secondary structure assignment------------- 4HP3
REM 4HP3
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 4HP3
ASG ASN C 59 1 C Coil 360.00 168.98 176.5 4HP3
ASG LYS C 60 2 C Coil -109.25 -168.48 63.6 4HP3
ASG LYS C 61 3 C Coil -67.58 145.72 166.2 4HP3
ASG ARG C 62 4 C Coil -73.57 163.96 102.4 4HP3
ASG LYS C 63 5 C Coil -118.80 149.72 179.1 4HP3
ASG ARG C 64 6 C Coil -50.21 152.51 141.5 4HP3
ASG CYS C 65 7 T Turn -87.26 -28.98 44.5 4HP3
ASG GLY C 66 8 T Turn 82.92 -3.94 19.8 4HP3
ASG VAL C 67 9 T Turn -130.34 1.04 117.2 4HP3
ASG CYS C 68 10 T Turn -89.96 164.74 17.2 4HP3
ASG VAL C 69 11 H AlphaHelix -55.40 -50.15 117.5 4HP3
ASG PRO C 70 12 H AlphaHelix -54.43 -39.78 8.7 4HP3
ASG CYS C 71 13 H AlphaHelix -66.27 -38.20 8.9 4HP3
ASG LEU C 72 14 H AlphaHelix -75.46 -9.73 121.6 4HP3
ASG ARG C 73 15 C Coil -61.70 133.03 100.1 4HP3
ASG LYS C 74 16 C Coil -83.78 -36.51 101.1 4HP3
ASG GLU C 75 17 C Coil -126.28 154.90 77.1 4HP3
ASG PRO C 76 18 C Coil -62.32 154.52 69.8 4HP3
ASG CYS C 77 19 T Turn -79.56 -28.38 37.5 4HP3
ASG GLY C 78 20 T Turn 85.69 -3.41 53.6 4HP3
ASG ALA C 79 21 T Turn -131.84 -4.18 83.8 4HP3
ASG CYS C 80 22 T Turn -85.89 170.01 21.6 4HP3
ASG TYR C 81 23 H AlphaHelix -54.25 -36.40 146.5 4HP3
ASG ASN C 82 24 H AlphaHelix -80.51 -36.64 17.8 4HP3
ASG CYS C 83 25 H AlphaHelix -60.21 -53.79 18.1 4HP3
ASG VAL C 84 26 H AlphaHelix -62.75 -37.85 102.2 4HP3
ASG ASN C 85 27 H AlphaHelix -111.16 51.47 56.7 4HP3
ASG ARG C 86 28 H AlphaHelix -55.89 -37.21 111.1 4HP3
ASG SER C 87 29 H AlphaHelix -68.31 -45.74 111.8 4HP3
ASG THR C 88 30 H AlphaHelix -82.57 -30.51 85.8 4HP3
ASG SER C 89 31 H AlphaHelix -77.88 -40.82 23.3 4HP3
ASG HIS C 90 32 C Coil 60.56 25.85 160.4 4HP3
ASG GLN C 91 33 C Coil -116.35 149.36 99.3 4HP3
ASG ILE C 92 34 C Coil -69.49 151.07 58.3 4HP3
ASG CYS C 93 35 T Turn -41.44 136.12 0.0 4HP3
ASG LYS C 94 36 T Turn -67.64 -22.11 125.0 4HP3
ASG MET C 95 37 T Turn -84.89 -8.62 98.3 4HP3
ASG ARG C 96 38 T Turn -107.49 -9.96 76.3 4HP3
ASG LYS C 97 39 T Turn -66.49 130.46 65.4 4HP3
ASG CYS C 98 40 T Turn -67.17 128.94 3.0 4HP3
ASG GLU C 99 41 T Turn -56.60 -30.72 81.8 4HP3
ASG GLN C 100 42 T Turn -74.34 -30.50 90.9 4HP3
ASG LEU C 101 43 T Turn -85.52 -12.19 38.5 4HP3
ASG LYS C 102 44 T Turn -75.28 -15.70 113.4 4HP3
ASG LYS C 103 45 T Turn -84.78 139.68 123.7 4HP3
ASG LYS C 104 46 C Coil -73.10 152.34 97.4 4HP3
ASG ARG C 105 47 T Turn -62.19 141.06 70.3 4HP3
ASG VAL C 106 48 T Turn -64.39 -34.73 116.5 4HP3
ASG VAL C 107 49 T Turn -138.13 139.31 53.7 4HP3
ASG PRO C 108 50 T Turn -61.96 177.63 115.6 4HP3
ASG MET C 109 51 C Coil -74.18 360.00 149.5 4HP3