Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/x3dna/4fy9.pdb1.pdb.txt Дата изменения: Fri Feb 15 17:35:13 2013 Дата индексирования: Mon Feb 25 20:42:05 2013 Кодировка: Поисковые слова: m 43

/pdb/4fy9.pdb1.pdb
4fy9.pdb1.out
2 # duplex
60 # number of base-pairs
1 0 # explicit bp numbering/hetero atoms
593 606 0 # 1 | ...1>D:...2_:[..U]U-*---U[..U]:..15_:D<...1 1.32 1.24 19.16 8.71 4.75
594 605 0 # 2 | ...1>D:...3_:[..A]A-----U[..U]:..14_:D<...1 0.91 0.83 4.97 9.19 -0.17
595 604 0 # 3 | ...1>D:...4_:[..A]A-----U[..U]:..13_:D<...1 1.16 1.09 9.03 8.77 -1.21
596 603 0 # 4 | ...1>D:...5_:[..U]U-----A[..A]:..12_:D<...1 0.93 0.68 0.58 9.44 0.32
597 602 9 # 5 x ...1>D:...6_:[..A]A-----U[..U]:..11_:D<...1 1.21 0.85 21.18 9.19 0.97
1201 1214 0 # 6 | ...1>I:...2_:[..U]U-*---U[..U]:..15_:I<...1 1.38 1.30 19.00 8.70 4.92
1202 1213 0 # 7 | ...1>I:...3_:[..A]A-----U[..U]:..14_:I<...1 0.90 0.83 4.76 9.18 -0.20
1203 1212 0 # 8 | ...1>I:...4_:[..A]A-----U[..U]:..13_:I<...1 1.15 1.07 8.20 8.77 -1.29
1204 1211 0 # 9 | ...1>I:...5_:[..U]U-----A[..A]:..12_:I<...1 0.90 0.63 1.17 9.44 0.22
1205 1210 9 # 10 x ...1>I:...6_:[..A]A-----U[..U]:..11_:I<...1 1.24 0.87 21.31 9.19 1.05
1809 1822 0 # 11 | ...1>N:...2_:[..U]U-*---U[..U]:..15_:N<...1 1.35 1.27 19.07 8.71 4.84
1810 1821 0 # 12 | ...1>N:...3_:[..A]A-----U[..U]:..14_:N<...1 0.91 0.83 4.66 9.18 -0.20
1811 1820 0 # 13 | ...1>N:...4_:[..A]A-----U[..U]:..13_:N<...1 1.12 1.05 8.13 8.76 -1.37
1812 1819 0 # 14 | ...1>N:...5_:[..U]U-----A[..A]:..12_:N<...1 0.93 0.67 0.65 9.45 0.31
1813 1818 9 # 15 x ...1>N:...6_:[..A]A-----U[..U]:..11_:N<...1 1.21 0.84 21.47 9.19 0.98
2417 2430 0 # 16 | ...1>S:...2_:[..U]U-*---U[..U]:..15_:S<...1 1.34 1.26 19.03 8.71 4.81
2418 2429 0 # 17 | ...1>S:...3_:[..A]A-----U[..U]:..14_:S<...1 0.87 0.80 4.69 9.18 -0.30
2419 2428 0 # 18 | ...1>S:...4_:[..A]A-----U[..U]:..13_:S<...1 1.19 1.12 8.77 8.78 -1.12
2420 2427 0 # 19 | ...1>S:...5_:[..U]U-----A[..A]:..12_:S<...1 0.89 0.63 0.92 9.44 0.20
2421 2426 9 # 20 x ...1>S:...6_:[..A]A-----U[..U]:..11_:S<...1 1.22 0.83 21.26 9.19 0.94
3025 3038 0 # 21 | ...1>X:...2_:[..U]U-*---U[..U]:..15_:X<...1 1.36 1.27 19.62 8.71 4.89
3026 3037 0 # 22 | ...1>X:...3_:[..A]A-----U[..U]:..14_:X<...1 0.88 0.81 4.80 9.18 -0.25
3027 3036 0 # 23 | ...1>X:...4_:[..A]A-----U[..U]:..13_:X<...1 1.17 1.10 8.82 8.77 -1.19
3028 3035 0 # 24 | ...1>X:...5_:[..U]U-----A[..A]:..12_:X<...1 0.91 0.66 0.82 9.43 0.27
3029 3034 9 # 25 x ...1>X:...6_:[..A]A-----U[..U]:..11_:X<...1 1.21 0.86 20.91 9.19 0.98
3633 3646 0 # 26 | ...1>C:...2_:[..U]U-*---U[..U]:..15_:C<...1 1.33 1.24 19.09 8.70 4.76
3634 3645 0 # 27 | ...1>C:...3_:[..A]A-----U[..U]:..14_:C<...1 0.91 0.84 5.08 9.18 -0.17
3635 3644 0 # 28 | ...1>C:...4_:[..A]A-----U[..U]:..13_:C<...1 1.16 1.09 8.61 8.77 -1.23
3636 3643 0 # 29 | ...1>C:...5_:[..U]U-----A[..A]:..12_:C<...1 0.91 0.64 1.59 9.44 0.27
3637 3642 9 # 30 x ...1>C:...6_:[..A]A-----U[..U]:..11_:C<...1 1.22 0.84 21.24 9.18 0.96
4241 4254 0 # 31 | ...1>H:...2_:[..U]U-*---U[..U]:..15_:H<...1 1.37 1.28 19.30 8.71 4.90
4242 4253 0 # 32 | ...1>H:...3_:[..A]A-----U[..U]:..14_:H<...1 0.92 0.84 4.29 9.19 -0.19
4243 4252 0 # 33 | ...1>H:...4_:[..A]A-----U[..U]:..13_:H<...1 1.18 1.10 9.06 8.76 -1.17
4244 4251 0 # 34 | ...1>H:...5_:[..U]U-----A[..A]:..12_:H<...1 0.90 0.64 1.17 9.43 0.23
4245 4250 9 # 35 x ...1>H:...6_:[..A]A-----U[..U]:..11_:H<...1 1.23 0.88 22.15 9.19 1.09
4849 4862 0 # 36 | ...1>M:...2_:[..U]U-*---U[..U]:..15_:M<...1 1.36 1.27 19.05 8.70 4.84
4850 4861 0 # 37 | ...1>M:...3_:[..A]A-----U[..U]:..14_:M<...1 0.90 0.83 4.82 9.18 -0.20
4851 4860 0 # 38 | ...1>M:...4_:[..A]A-----U[..U]:..13_:M<...1 1.18 1.10 8.79 8.78 -1.18
4852 4859 0 # 39 | ...1>M:...5_:[..U]U-----A[..A]:..12_:M<...1 0.88 0.61 1.50 9.43 0.19
4853 4858 9 # 40 x ...1>M:...6_:[..A]A-----U[..U]:..11_:M<...1 1.26 0.91 21.67 9.20 1.17
5457 5470 0 # 41 | ...1>R:...2_:[..U]U-*---U[..U]:..15_:R<...1 1.37 1.28 19.24 8.71 4.89
5458 5469 0 # 42 | ...1>R:...3_:[..A]A-----U[..U]:..14_:R<...1 0.91 0.84 4.70 9.18 -0.18
5459 5468 0 # 43 | ...1>R:...4_:[..A]A-----U[..U]:..13_:R<...1 1.21 1.12 8.93 8.78 -1.10
5460 5467 0 # 44 | ...1>R:...5_:[..U]U-----A[..A]:..12_:R<...1 0.88 0.62 1.32 9.44 0.19
5461 5466 9 # 45 x ...1>R:...6_:[..A]A-----U[..U]:..11_:R<...1 1.24 0.87 21.59 9.19 1.05
6065 6078 0 # 46 | ...1>W:...2_:[..U]U-*---U[..U]:..15_:W<...1 1.41 1.32 19.15 8.72 5.01
6066 6077 0 # 47 | ...1>W:...3_:[..A]A-----U[..U]:..14_:W<...1 0.87 0.80 4.40 9.17 -0.32
6067 6076 0 # 48 | ...1>W:...4_:[..A]A-----U[..U]:..13_:W<...1 1.16 1.08 8.40 8.79 -1.26
6068 6075 0 # 49 | ...1>W:...5_:[..U]U-----A[..A]:..12_:W<...1 0.91 0.65 1.54 9.45 0.28
6069 6074 9 # 50 x ...1>W:...6_:[..A]A-----U[..U]:..11_:W<...1 1.21 0.84 21.86 9.18 0.99
6673 6686 0 # 51 | ...1>2:...2_:[..U]U-*---U[..U]:..15_:2<...1 1.36 1.27 19.42 8.70 4.86
6674 6685 0 # 52 | ...1>2:...3_:[..A]A-----U[..U]:..14_:2<...1 0.90 0.81 4.39 9.19 -0.26
6675 6684 0 # 53 | ...1>2:...4_:[..A]A-----U[..U]:..13_:2<...1 1.17 1.09 8.52 8.78 -1.23
6676 6683 0 # 54 | ...1>2:...5_:[..U]U-----A[..A]:..12_:2<...1 0.90 0.63 0.92 9.44 0.21
6677 6682 9 # 55 x ...1>2:...6_:[..A]A-----U[..U]:..11_:2<...1 1.23 0.86 21.48 9.18 1.02
7281 7294 0 # 56 | ...1>7:...2_:[..U]U-*---U[..U]:..15_:7<...1 1.36 1.27 18.82 8.71 4.85
7282 7293 0 # 57 | ...1>7:...3_:[..A]A-----U[..U]:..14_:7<...1 0.89 0.81 4.51 9.18 -0.27
7283 7292 0 # 58 | ...1>7:...4_:[..A]A-----U[..U]:..13_:7<...1 1.17 1.09 8.80 8.78 -1.21
7284 7291 0 # 59 | ...1>7:...5_:[..U]U-----A[..A]:..12_:7<...1 0.90 0.64 1.27 9.43 0.23
7285 7290 0 # 60 | ...1>7:...6_:[..A]A-----U[..U]:..11_:7<...1 1.24 0.86 21.12 9.20 1.02
##### Base-pair criteria used: 4.00 0.00 15.00 2.50 65.00 4.50 7.50 [ O N]
##### 12 non-Watson-Crick base-pairs, and 12 helices (0 isolated bps)
##### Helix #1 (5): 1 - 5
##### Helix #2 (5): 6 - 10
##### Helix #3 (5): 11 - 15
##### Helix #4 (5): 16 - 20
##### Helix #5 (5): 21 - 25
##### Helix #6 (5): 26 - 30
##### Helix #7 (5): 31 - 35
##### Helix #8 (5): 36 - 40
##### Helix #9 (5): 41 - 45
##### Helix #10 (5): 46 - 50
##### Helix #11 (5): 51 - 55
##### Helix #12 (5): 56 - 60