allpy
changeset 515:f98cc0c91e06
blocks3d(): fix a bug
when cliques are expanded to rectangles, we need indexes
of first and last columns of clique
do not use columns.index(...) to do it
since different columns can be == and list.index uses ==
| author | boris (kodomo) <bnagaev@gmail.com> |
|---|---|
| date | Wed, 23 Feb 2011 23:10:47 +0300 |
| parents | 1208a7ec6e1b |
| children | 9089a005199e |
| files | allpy/structure.py |
| diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
line diff
1.1 --- a/allpy/structure.py Wed Feb 23 22:16:02 2011 +0300 1.2 +++ b/allpy/structure.py Wed Feb 23 23:10:47 2011 +0300 1.3 @@ -300,8 +300,8 @@ 1.4 sequences = set(monomer2sequence[m] for m in clique) 1.5 columns = set(monomer2column[m] for m in clique) 1.6 columns = sorted(columns, key=column2pos.get) 1.7 - first_column_i = self.columns.index(columns[0]) 1.8 - last_column_i = self.columns.index(columns[-1]) 1.9 + first_column_i = column2pos[columns[0]] 1.10 + last_column_i = column2pos[columns[-1]] 1.11 block = copy(self) 1.12 block.columns = self.columns[first_column_i:last_column_i+1] 1.13 block.sequences = sequences