JWST Pipeline routines in IDL

Index

.     _     A     C     D     F     G     I     L     M     N     O     P     R     S     T     X     Y    

.

./ directory

_

_extra keyword in routine density in file density.pro

A

a parameter in routine cephes_igam in file GLSFit.pro

a parameter in routine cephes_igamc in file GLSFit.pro

a parameter in routine cephes_igami in file GLSFit.pro

a parameter in routine cephes_igamc in file covar2ellipse.pro

a parameter in routine cephes_igam in file covar2ellipse.pro

a parameter in routine cephes_igami in file covar2ellipse.pro

add_cosmic_rays routine in generate_ramp.pro

analysis routine in generate_ramp.pro

analyze_dark routine in analyze_dark_ramp.pro

analyze_dark_ramp routine in analyze_dark_ramp.pro

Wrapper to correct NIRCam dark ramps for 1/f noise and derive dark map and RON

analyze_dark_ramp.pro .pro file in ./ directory

Wrapper to correct NIRCam dark ramps for 1/f noise and derive dark map and RON

C

cephes_igam routine in GLSFit.pro

Incomplete gamma integral

cephes_igam routine in covar2ellipse.pro

Incomplete gamma integral

cephes_igamc routine in covar2ellipse.pro

Complemented incomplete gamma integral

cephes_igamc routine in GLSFit.pro

Complemented incomplete gamma integral

cephes_igami routine in covar2ellipse.pro

Inverse of complemented imcomplete gamma integral

cephes_igami routine in GLSFit.pro

Inverse of complemented imcomplete gamma integral

cephes_ndtri routine in GLSFit.pro

cephes_ndtri routine in covar2ellipse.pro

cephes_polevl routine in GLSFit.pro

function

cephes_polevl routine in covar2ellipse.pro

function

cephes_setmachar routine in covar2ellipse.pro

cephes_setmachar routine in GLSFit.pro

channel parameter in routine temp_convert in file temp_convert.pro

NIRCAM channel, either 'SW' or 'LW'

clevel keyword in routine mpchilim in file GLSFit.pro

clevel keyword in routine mpchilim in file covar2ellipse.pro

closeps routine in analyze_dark_ramp.pro

closeps routine in opencloseps.pro

closeps

closeps routine in GLSFit.pro

GLS routines to calculate linear fit

coef parameter in routine cephes_polevl in file covar2ellipse.pro

coef parameter in routine cephes_polevl in file GLSFit.pro

contour keyword in routine density in file density.pro

correct_evenodd_ramp.pro .pro file in ./ directory

This function corrects for the even-odd effect in full frame NIRCam files

corrector routine in corrector.pro

Performs referene pixel correction of NIRCam data

corrector.pro .pro file in ./ directory

This file contains the procedures to perform the reference pixel correction of NIRCam data according to the report by M.

covar parameter in routine covar2ellipse in file covar2ellipse.pro

covar parameter in routine covar2ellipse in file GLSFit.pro

covar2ellipse routine in covar2ellipse.pro

NAME: COVAR2ELLIPSE()

covar2ellipse routine in GLSFit.pro

NAME: COVAR2ELLIPSE()

covar2ellipse.pro .pro file in ./ directory

NAME: MPCHILIM

CR_found parameter in routine FIND_CR in file generate_ramp.pro

CR_found parameter in routine analysis in file generate_ramp.pro

CRMAP parameter in routine add_cosmic_rays in file generate_ramp.pro

CRPATH keyword in routine add_cosmic_rays in file generate_ramp.pro

cryo parameter in routine temp_convert in file temp_convert.pro

cryo cycle at LMAT, either 1, 2, or 3

ct keyword in routine density in file density.pro

D

dark_averages parameter in routine PRINT_RESULTS in file analyze_dark_ramp.pro

darkcube parameter in routine PRINT_RESULTS in file analyze_dark_ramp.pro

Dat parameter in routine optimal_smooth_fft in file optimal_smooth_fft.pro

signal to be filtered

data0 parameter in routine ramp_OPTIMAL_FILTER in file ramp_optimal_filter.pro

ramp datacube to be corrected and after correction, overwritten!

data0 parameter in routine RAMP_GETRON in file ramp_getron.pro

ramp datacube to be analyzed

data0 parameter in routine RAMP_FIXSECTORS in file ramp_fixsectors.pro

ramp datacube to be corrected and after correction, overwritten!

data0 parameter in routine RAMP_COMMON_LEVEL in file ramp_common_level.pro

ramp datacube before and after correction: it gets overwritten!

data0 parameter in routine RAMP_BasicLinFit in file ramp_basiclinfit.pro

ramp datacube to be fit

data0 parameter in routine ramp_correct_evenodd in file correct_evenodd_ramp.pro

ramp datacube to be corrected and after correction, overwritten!

data0 parameter in routine READ_ONE_RAMP in file read_one_ramp.pro

ramp datacube to be extracted

DATA_PATH parameter in routine FIND_FILES in file find_files.pro

e.g.

Delt parameter in routine optimal_smooth_fft in file optimal_smooth_fft.pro

Delta time between samples

density routine in density.pro

This procedure shows the density of points in an x-y plot.

density.pro .pro file in ./ directory

DETECTOR parameter in routine FIND_FILES in file find_files.pro

e.g.

dlog keyword in routine density in file density.pro

dof parameter in routine mpchilim in file GLSFit.pro

dof parameter in routine mpchilim in file covar2ellipse.pro

drange keyword in routine density in file density.pro

dsize keyword in routine density in file density.pro

F

file parameter in routine get_telemetry in file get_telemetry.pro

fileinfo parameter in routine PRINT_RESULTS in file analyze_dark_ramp.pro

fileinfo parameter in routine RAMP_PLOT_4HISTO in file ramp_plot_4histo.pro

String array containing the PATH name [0], the directory name [1] and the filebasename [2] for postcript output

fileinfo parameter in routine RAMP_PlotBasicLinFit in file ramp_plotbasiclinfit.pro

String array containing the PATH name [0], the directory name [1] and the filebasename [2] for postcript output

FILES parameter in routine FIND_FILES in file find_files.pro

string array of fits files with names matching the obs_id and detector strings

FILTER keyword in routine corrector in file corrector.pro

FIND_CR routine in generate_ramp.pro

FIND_FILES routine in find_files.pro

Used to select the list of fits files to be processed; all must be in the same directory

find_files.pro .pro file in ./ directory

This function finds the list of fits files to be processed, according to specified keys; all must be in a given directory

fit_params parameter in routine RAMP_GETRON in file ramp_getron.pro

Two arrays with the intercept and slope derived from the linear fit

fit_params parameter in routine RAMP_BasicLinFit in file ramp_basiclinfit.pro

intercept => [2048,2048,0] slope => [2048,2048,1] sigma_intercept => [2048,2048,2] sigma_slope => [2048,2048,3]

fit_params parameter in routine RAMP_PlotBasicLinFit in file ramp_plotbasiclinfit.pro

Two arrays with the intercept and slope derived from the linear fit

flevels keyword in routine density in file density.pro

FOURIER routine in analyze_dark_ramp.pro

fpa_temp parameter in routine temp_convert in file temp_convert.pro

temperature in output

frame parameter in routine RAMP_PLOT_4HISTO in file ramp_plot_4histo.pro

frame to be plotted

frame_4AVERAGES parameter in routine RAMP_PLOT_4HISTO in file ramp_plot_4histo.pro

the results of the gaussian fit

G

gaussfit_results parameter in routine RAMP_PlotBasicLinFit in file ramp_plotbasiclinfit.pro

GENERATE_DATACUBE routine in generate_ramp.pro

GENERATE_RAMP routine in generate_ramp.pro

generate_ramp.pro .pro file in ./ directory

get_telemetry routine in get_telemetry.pro

A little script to read the temperatures from the telemetry file, use as an example

get_telemetry.pro .pro file in ./ directory

GLSFit.pro .pro file in ./ directory

GLS routines to calculate linear fit

I

Itmc parameter in routine temp_convert in file temp_convert.pro

telemetry value in input to be converted

L

linearize_mr routine in GLSFit.pro

GLS routines to calculate linear fit

linearize_mr routine in linearize_mr.pro

linearize_mr.pro .pro file in ./ directory

M

MASK parameter in routine RAMP_PLOT_4HISTO in file ramp_plot_4histo.pro

the map of the bad pixels (>4sigma)

MODE keyword in routine add_cosmic_rays in file generate_ramp.pro

module parameter in routine temp_convert in file temp_convert.pro

NIRCAM module, either 'A" or 'B'

mpchilim routine in GLSFit.pro

GLS routines to calculate linear fit

mpchilim routine in covar2ellipse.pro

GLS routines to calculate linear fit

N

Ngroups keyword in routine GENERATE_DATACUBE in file generate_ramp.pro

nomefile parameter in routine openeps in file GLSFit.pro

nomefile parameter in routine openeps in file analyze_dark_ramp.pro

nomefile parameter in routine openeps in file opencloseps.pro

nsigma keyword in routine covar2ellipse in file GLSFit.pro

nsigma keyword in routine covar2ellipse in file covar2ellipse.pro

O

OBS_ID parameter in routine FIND_FILES in file find_files.pro

e.g.

opencloseps.pro .pro file in ./ directory

openeps routine in analyze_dark_ramp.pro

openeps routine in GLSFit.pro

GLS routines to calculate linear fit

openeps routine in opencloseps.pro

open ps

optimal_smooth_fft routine in optimal_smooth_fft.pro

Performs an optimal filtering of the vertical reference pixel to reduce 1/f noise (horizontal stripes)

optimal_smooth_fft.pro .pro file in ./ directory

This file contains the procedures to perform optimal filtering of the vertical reference pixel to reduce 1/f noise (horizontal stripes), based on the Kosarev & Pantos algorithm

P

p parameter in routine mpchilim in file GLSFit.pro

p parameter in routine mpchilim in file covar2ellipse.pro

PRINT_RESULTS routine in analyze_dark_ramp.pro

ps_white keyword in routine density in file density.pro

R

ramp parameter in routine corrector in file corrector.pro

datacube of 2048,2048,N to be filtered

ramp parameter in routine linearize_mr in file linearize_mr.pro

ramp parameter in routine linearize_mr in file GLSFit.pro

ramp parameter in routine GENERATE_DATACUBE in file generate_ramp.pro

ramp parameter in routine GENERATE_RAMP in file generate_ramp.pro

RAMP_BasicLinFit routine in ramp_basiclinfit.pro

Basic linear fit, returns intercept and slope for each pixel

ramp_basiclinfit.pro .pro file in ./ directory

This function performs a basic linear fit, returns intercept and slope for each pixel

RAMP_COMMON_LEVEL routine in ramp_common_level.pro

Matches the four sectors of the detector to a common level.

ramp_common_level.pro .pro file in ./ directory

This function matches the four sectors of each frame to a common level.

ramp_correct_evenodd routine in correct_evenodd_ramp.pro

Correction of the even-odd pixels in NIRCam data

RAMP_FIXSECTORS routine in ramp_fixsectors.pro

Correct for the amplifier reset of NIRCam ASICs by matching the top/bottom reference pixes of adjacent groups

ramp_fixsectors.pro .pro file in ./ directory

This function corrects for the amplifier reset of NIRCam ASICs by matching the top/bottom reference pixes of adjacent groups

RAMP_GETRON routine in ramp_getron.pro

Creates a RON map subtracting from a dark current ramp the linear fit and estimating the residuals stdev for each pixel

ramp_getron.pro .pro file in ./ directory

This procedure creates a 2-D RON map by subtracting from a dark current ramp the linear fit, and estimating the residuals stdev for each pixel

ramp_OPTIMAL_FILTER routine in ramp_optimal_filter.pro

Performs an optimal filtering of the vertical reference pixel to reduce 1/f noise (horizontal stripes)

ramp_optimal_filter.pro .pro file in ./ directory

This function performs an optimal filtering of the vertical reference pixel to reduce 1/f noise (horizontal stripes)

RAMP_PLOT_4HISTO routine in ramp_plot_4histo.pro

ramp_plot_4histo.pro .pro file in ./ directory

This function

RAMP_PlotBasicLinFit routine in ramp_plotbasiclinfit.pro

gaussfit_results is a datacube with gaussfit results [5,2]: intercept => [*,0] slope => [*,1] Let us remember the 5 values returned by gaussfit,array,aa: aa = coefficients of the Gaussian fit: Height, mean, sigma,...

ramp_plotbasiclinfit.pro .pro file in ./ directory

This procedure plots the histograms of the two linear fit parameters, returning also the results of the gaussian fit.

READ_ONE_RAMP routine in read_one_ramp.pro

Reads a single fits file in multiaccum format

read_one_ramp.pro .pro file in ./ directory

This procedure reads a single fits file in multiaccum format

RON parameter in routine RAMP_GETRON in file ramp_getron.pro

2-D array with thre RON map :File Comments: Given a ramp, this procedure removes, for each pixel, the intercept/slope value from the linear fit.

ron parameter in routine PRINT_RESULTS in file analyze_dark_ramp.pro

ron_averages parameter in routine PRINT_RESULTS in file analyze_dark_ramp.pro

rp_cleaned parameter in routine corrector in file corrector.pro

same datacube in input, after reference pixel correction /FILTER: in, optional, type=fltarr if set, the reference pixels are smoothed using the Kosarev and Pantos algorithm

run_GLSfit routine in GLSFit.pro

GLS routines to calculate linear fit

run_GLSfit routine in run_glsfit.pro

GLS routines to calculate linear fit

run_glsfit.pro .pro file in ./ directory

S

SEED keyword in routine GENERATE_RAMP in file generate_ramp.pro

SEED keyword in routine GENERATE_DATACUBE in file generate_ramp.pro

SEED keyword in routine add_cosmic_rays in file generate_ramp.pro

SET_DETECTOR_PARAMS routine in set_detector_params.pro

Specifies main detector parameters

set_detector_params.pro .pro file in ./ directory

This function sets the main detector parameters to be transmitted to other routines through common blocks

sigma keyword in routine mpchilim in file covar2ellipse.pro

sigma keyword in routine mpchilim in file GLSFit.pro

slevel keyword in routine mpchilim in file covar2ellipse.pro

slevel keyword in routine mpchilim in file GLSFit.pro

Smoothed_Data parameter in routine optimal_smooth_fft in file optimal_smooth_fft.pro

selfexplanatory

T

temp_convert routine in temp_convert.pro

Convert the temperature in the telemetry file (or fits headers) from ADUs to decrees

temp_convert.pro .pro file in ./ directory

time parameter in routine GENERATE_DATACUBE in file generate_ramp.pro

time parameter in routine linearize_mr in file GLSFit.pro

time parameter in routine linearize_mr in file linearize_mr.pro

time parameter in routine GENERATE_RAMP in file generate_ramp.pro

tmc parameter in routine temp_convert in file temp_convert.pro

flag, either 1 or 2, due to a change of set point/calibration; in the .csv file name

X

x parameter in routine cephes_polevl in file GLSFit.pro

x parameter in routine cephes_igam in file GLSFit.pro

x parameter in routine cephes_igamc in file GLSFit.pro

x parameter in routine cephes_polevl in file covar2ellipse.pro

x parameter in routine cephes_igam in file covar2ellipse.pro

x parameter in routine cephes_igamc in file covar2ellipse.pro

x0 parameter in routine density in file density.pro

xlog keyword in routine density in file density.pro

Y

y0 parameter in routine cephes_ndtri in file GLSFit.pro

y0 parameter in routine cephes_igami in file GLSFit.pro

y0 parameter in routine cephes_ndtri in file covar2ellipse.pro

y0 parameter in routine cephes_igami in file covar2ellipse.pro

y0 parameter in routine density in file density.pro

ylog keyword in routine density in file density.pro