11. allpy: 527b713affaa
... t', 'd', 'M', None), 1.32 -"5NC": ('c', 'd', 'M', None), 1.33 -"CSF": ('c', 'r', 'M', None), 1.34 -"0CS": ('a', 'p', 'M', None), 1.35 -"B2V": ('v', 'p', 'M', None), 1.36 -"TAL": ('n', 'r', None, None), 1.37 -"SCY": ('c', 'p', 'M', None), 1.38 -"KYQ": ('k ...
12. allpy: lib/monomer.py diff
... type, is_modified, none, name = data 1.33 if m_type == 'p': 1.34 AminoAcidType(name, code1, code3, is_modified) 1.35 - 1.36 + if m_type == 'd': 1.37 + DNAType(name, code1, code3, is_modified) 1.38 del code3, data, code1, m_type, is_modified, none, name 1 ...
13. allpy: 516a8059950f
... 2.35 - edge = Graph.edge(m1, m2) 2.36 - edges[edge] = 1.0 2.37 + for part in core_block.continuous_blocks(min_width): 2.38 ... CSF": ('c', 'r', 'M', None), 3.34 -"0CS": ('a', 'p', 'M', None), 3.35 -"B2V": ('v', 'p', 'M', None), 3.36 -"TAL": ('n', 'r ...
14. allpy: fc6418e32e3c
... self, sequence, pdb_chain, gap='-'): 2.33 """ Returns string representing secondary structure """ 2.34 return ''.join([ 2.35 (sequence.pdb_secstr[pdb_chain][m] if sequence.secstr_has(pdb_chain, m) else gap) 2.36 for m in self.body[sequence]]) 2.37 2.38 ...
15. allpy: 90f0fa47eaf5
... FILE',type=w) 2.33 + p.add_argument('-p',help='Output PyMol file',metavar='FILE',type=w) 2.34 args = p.parse_args() 2.35 homology_from_3d(markup_file=args.m, homology_file=args.y, max_delta=args.d, ignore_one_ss=args.e, 2.36 alignment_file=args.i, out ...
16. allpy: e2590c5179f6
... d', 'p', 'M', None), 1.32 -"S4G": ('g', 'd', 'M', None), 1.33 -"MA7": ('a', 'd', 'M', None), 1.34 -"S4C": ('c', 'r', 'M', None), 1.35 -"UAR": ('u', 'r', 'M', None), 1.36 -"SPT": ('t', 'd', 'M', None), 1.37 -"S4U": ('u', 'r', 'M', None), 1.38 -"TAF": ('t ...
17. py2010-mercurial: log
... Big M . test . Sat, 06 Nov 2010 13:35:15 +0300 . Big M . test . ... Sat, 06 Nov 2010 13:35:15 +0300 . Big M . test . Sat, 06 Nov 2010 13:24:51 +0300 . ... Sun, 03 Oct 2010 22:35:58 +0400 . Big M . expectations . ...
18. py2010-mercurial: README history
... Big M . test . Sat, 06 Nov 2010 13:35:15 +0300 . Big M . test . ... Sat, 06 Nov 2010 13:35:15 +0300 . Big M . test . Sat, 06 Nov 2010 13:24:51 +0300 . ... Sun, 03 Oct 2010 22:35:58 +0400 . Big M . expectations . ...
19. py2010-mercurial: README history
... age . author . description . Sat, 06 Nov 2010 13:35:15 +0300 . Big M . test . ... Sat, 06 Nov 2010 13:35:15 +0300 . Big M . test . Sat, 06 Nov 2010 13:24:51 +0300 . ... Sun, 03 Oct 2010 22:35:58 +0400 . Big M . expectations . ...
20. py2010-mercurial: README history
... Big M . test . Sat, 06 Nov 2010 13:35:15 +0300 . Big M . test . ... Sat, 06 Nov 2010 13:35:15 +0300 . Big M . test . Sat, 06 Nov 2010 13:24:51 +0300 . ... Sun, 03 Oct 2010 22:35:58 +0400 . Big M . expectations . ...