Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.ru/npidb/pdb/pdb_new/stride/4hp1.std.txt Дата изменения: Wed Dec 19 12:43:07 2012 Дата индексирования: Mon Feb 4 00:43:19 2013 Кодировка:

REM -------------------------------------------------------------------- 4HP1
REM 4HP1
REM STRIDE: Knowledge-based secondary structure assignment 4HP1
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 4HP1
REM 4HP1
REM Residue accessible surface area calculation 4HP1
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 4HP1
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 4HP1
REM 4HP1
REM ------------------------ General information ----------------------- 4HP1
REM 4HP1
HDR DNA BINDING PROTEIN/DNA 23-OCT-12 4HP1 4HP1
CMP MOL_ID: 1; 4HP1
CMP MOLECULE: DNA (5'-D(*GP*CP*CP*AP*CP*(5CM)P*GP*GP*TP*GP*GP*C) 4HP1
CMP CHAIN: A, B; 4HP1
CMP ENGINEERED: YES; 4HP1
CMP MOL_ID: 2; 4HP1
CMP MOLECULE: LOC100036628 PROTEIN; 4HP1
CMP CHAIN: C; 4HP1
CMP ENGINEERED: YES 4HP1
SRC MOL_ID: 1; 4HP1
SRC SYNTHETIC: YES; 4HP1
SRC MOL_ID: 2; 4HP1
SRC ORGANISM_SCIENTIFIC: XENOPUS (SILURANA) TROPICALIS; 4HP1
SRC ORGANISM_COMMON: WESTERN CLAWED FROG; 4HP1
SRC ORGANISM_TAXID: 8364; 4HP1
SRC GENE: TET3, LOC100036628; 4HP1
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 4HP1
SRC EXPRESSION_SYSTEM_TAXID: 511693; 4HP1
SRC EXPRESSION_SYSTEM_STRAIN: BL21-V2R-PRARE2; 4HP1
SRC EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; 4HP1
SRC EXPRESSION_SYSTEM_PLASMID: PET28-MHL 4HP1
AUT X.CHAO,W.TEMPEL,C.BIAN,C.BOUNTRA,C.H.ARROWSMITH,A.M.EDWARDS,J 4HP1
AUT STRUCTURAL GENOMICS CONSORTIUM (SGC) 4HP1
REM 4HP1
REM -------------------- Secondary structure summary ------------------- 4HP1
REM 4HP1
CHN /data/npidb/pdb/pdb_new/all/pdb4hp1.pdb C 4HP1
REM 4HP1
REM . . . . . 4HP1
SEQ 1 NKKRKRCGVCVPCLRKEPCGACYNCVNRSTSHQICKMRKCEQLKKKRVVP 50 4HP1
STR TTTT GGG TTTTHHHHHGGG TTTTTTTTTTT TTTT 4HP1
REM 4HP1
REM 4HP1
SEQ 51 M 51 4HP1
STR 4HP1
REM 4HP1
REM 4HP1
REM 4HP1
LOC AlphaHelix TYR 81 C ASN 85 C 4HP1
LOC 310Helix PRO 70 C LEU 72 C 4HP1
LOC 310Helix ARG 86 C THR 88 C 4HP1
LOC TurnIV CYS 65 C CYS 68 C 4HP1
LOC TurnIV CYS 77 C CYS 80 C 4HP1
LOC TurnI CYS 93 C ARG 96 C 4HP1
LOC TurnI LYS 94 C LYS 97 C 4HP1
LOC TurnI CYS 98 C LEU 101 C 4HP1
LOC TurnI GLU 99 C LYS 102 C 4HP1
LOC TurnI GLN 100 C LYS 103 C 4HP1
LOC TurnVIII ARG 105 C PRO 108 C 4HP1
REM 4HP1
REM --------------- Detailed secondary structure assignment------------- 4HP1
REM 4HP1
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 4HP1
ASG ASN C 59 1 C Coil 360.00 178.24 199.0 4HP1
ASG LYS C 60 2 C Coil -114.51 173.92 70.6 4HP1
ASG LYS C 61 3 C Coil -61.16 150.43 163.5 4HP1
ASG ARG C 62 4 C Coil -82.89 149.29 106.7 4HP1
ASG LYS C 63 5 C Coil -107.54 155.11 163.4 4HP1
ASG ARG C 64 6 C Coil -52.19 157.74 137.3 4HP1
ASG CYS C 65 7 T Turn -88.99 -32.88 43.1 4HP1
ASG GLY C 66 8 T Turn 91.81 -4.99 23.2 4HP1
ASG VAL C 67 9 T Turn -131.93 -7.20 116.1 4HP1
ASG CYS C 68 10 T Turn -84.39 164.72 18.3 4HP1
ASG VAL C 69 11 C Coil -58.76 -44.85 116.1 4HP1
ASG PRO C 70 12 G 310Helix -60.87 -41.40 12.5 4HP1
ASG CYS C 71 13 G 310Helix -60.61 -33.56 7.4 4HP1
ASG LEU C 72 14 G 310Helix -78.90 -12.74 114.1 4HP1
ASG ARG C 73 15 C Coil -61.91 127.44 80.7 4HP1
ASG LYS C 74 16 C Coil -74.28 -42.11 119.3 4HP1
ASG GLU C 75 17 C Coil -120.75 153.47 138.1 4HP1
ASG PRO C 76 18 C Coil -61.43 156.15 75.2 4HP1
ASG CYS C 77 19 T Turn -80.11 -25.59 36.3 4HP1
ASG GLY C 78 20 T Turn 82.43 -2.74 55.6 4HP1
ASG ALA C 79 21 T Turn -132.91 -12.14 80.1 4HP1
ASG CYS C 80 22 T Turn -72.74 172.29 21.2 4HP1
ASG TYR C 81 23 H AlphaHelix -60.22 -37.55 161.1 4HP1
ASG ASN C 82 24 H AlphaHelix -75.33 -33.82 19.7 4HP1
ASG CYS C 83 25 H AlphaHelix -67.28 -45.10 24.5 4HP1
ASG VAL C 84 26 H AlphaHelix -63.04 -32.92 101.4 4HP1
ASG ASN C 85 27 H AlphaHelix -102.25 34.63 46.3 4HP1
ASG ARG C 86 28 G 310Helix -46.28 -51.10 70.5 4HP1
ASG SER C 87 29 G 310Helix -54.63 -34.68 130.5 4HP1
ASG THR C 88 30 G 310Helix -95.69 -39.38 109.5 4HP1
ASG SER C 89 31 C Coil -72.26 141.79 32.1 4HP1
ASG HIS C 90 32 C Coil -106.65 23.73 193.0 4HP1
ASG GLN C 91 33 C Coil -118.09 140.79 123.6 4HP1
ASG ILE C 92 34 C Coil -70.44 149.31 63.4 4HP1
ASG CYS C 93 35 T Turn -41.88 133.59 8.4 4HP1
ASG LYS C 94 36 T Turn -61.88 -28.18 108.2 4HP1
ASG MET C 95 37 T Turn -83.39 -11.23 99.4 4HP1
ASG ARG C 96 38 T Turn -101.62 -12.02 76.4 4HP1
ASG LYS C 97 39 T Turn -55.25 125.32 65.9 4HP1
ASG CYS C 98 40 T Turn -66.88 133.33 4.2 4HP1
ASG GLU C 99 41 T Turn -58.14 -35.24 87.3 4HP1
ASG GLN C 100 42 T Turn -70.04 -30.88 91.1 4HP1
ASG LEU C 101 43 T Turn -84.15 -12.51 39.8 4HP1
ASG LYS C 102 44 T Turn -72.62 -11.27 110.0 4HP1
ASG LYS C 103 45 T Turn -87.90 129.24 121.5 4HP1
ASG LYS C 104 46 C Coil -53.11 146.01 118.9 4HP1
ASG ARG C 105 47 T Turn -57.89 136.16 63.3 4HP1
ASG VAL C 106 48 T Turn -58.72 -38.01 118.3 4HP1
ASG VAL C 107 49 T Turn -138.47 136.26 60.7 4HP1
ASG PRO C 108 50 T Turn -72.19 175.26 119.5 4HP1
ASG MET C 109 51 C Coil -99.05 360.00 156.2 4HP1