Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.ru/npidb/pdb/pdb_new/stride/4r55.std.txt Дата изменения: Wed Sep 23 13:17:43 2015 Дата индексирования: Sun Apr 10 17:55:26 2016 Кодировка:

REM -------------------------------------------------------------------- 4R55
REM 4R55
REM STRIDE: Knowledge-based secondary structure assignment 4R55
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 4R55
REM 4R55
REM Residue accessible surface area calculation 4R55
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 4R55
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 4R55
REM 4R55
REM ------------------------ General information ----------------------- 4R55
REM 4R55
HDR DNA BINDING PROTEIN/DNA 20-AUG-14 4R55 4R55
CMP MOL_ID: 1; 4R55
CMP MOLECULE: CHROMATIN PROTEIN CREN7; 4R55
CMP CHAIN: A; 4R55
CMP ENGINEERED: YES; 4R55
CMP MUTATION: YES; 4R55
CMP MOL_ID: 2; 4R55
CMP MOLECULE: DNA (5'-D(*GP*TP*GP*AP*TP*CP*AP*C)-3'); 4R55
CMP CHAIN: B, C; 4R55
CMP ENGINEERED: YES 4R55
SRC MOL_ID: 1; 4R55
SRC ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS P2; 4R55
SRC ORGANISM_TAXID: 273057; 4R55
SRC GENE: CREN7, SSO6901; 4R55
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 4R55
SRC EXPRESSION_SYSTEM_TAXID: 562; 4R55
SRC EXPRESSION_SYSTEM_STRAIN: ROSETTA 2 (DE3) PLYSS; 4R55
SRC EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; 4R55
SRC EXPRESSION_SYSTEM_PLASMID: PET30A; 4R55
SRC MOL_ID: 2; 4R55
SRC SYNTHETIC: YES; 4R55
SRC ORGANISM_SCIENTIFIC: SYNTHETIC; 4R55
SRC ORGANISM_TAXID: 32630 4R55
AUT Z.F.ZHANG,Y.GONG,Y.Y.CHEN,H.B.LI,L.HUANG 4R55
REM 4R55
REM -------------------- Secondary structure summary ------------------- 4R55
REM 4R55
CHN /data/npidb/pdb/pdb_new/all/pdb4r55.pdb A 4R55
REM 4R55
REM . . . . . 4R55
SEQ 1 SGKKPVKVKTPAGKEAELVPEKVWALGRVKIGLFKDPETGKYFRHKLPDD 50 4R55
STR EEEETTTT EEEE TTEEEEETTEEEEEEETTTTT EEEEE TTT 4R55
REM 4R55
REM 4R55
SEQ 51 YPI 53 4R55
STR T 4R55
REM 4R55
REM 4R55
REM 4R55
LOC Strand VAL 8 A LYS 11 A 4R55
LOC Strand GLU 17 A LEU 20 A 4R55
LOC Strand LYS 24 A LEU 28 A 4R55
LOC Strand VAL 31 A LYS 37 A 4R55
LOC Strand TYR 44 A LYS 48 A 4R55
LOC TurnI THR 12 A GLY 15 A 4R55
LOC TurnVIII PRO 22 A VAL 25 A 4R55
LOC TurnIV ALA 27 A ARG 30 A 4R55
LOC TurnII' LEU 28 A VAL 31 A 4R55
LOC TurnIV ASP 38 A THR 41 A 4R55
LOC TurnI PRO 39 A GLY 42 A 4R55
LOC TurnI PRO 50 A TYR 53 A 4R55
REM 4R55
REM --------------- Detailed secondary structure assignment------------- 4R55
REM 4R55
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 4R55
ASG SER A 3 1 C Coil 360.00 159.19 174.5 4R55
ASG GLY A 4 2 C Coil -74.01 147.96 63.0 4R55
ASG LYS A 5 3 C Coil -65.70 160.14 61.7 4R55
ASG LYS A 6 4 C Coil -56.50 129.90 110.0 4R55
ASG PRO A 7 5 C Coil -61.27 151.45 63.7 4R55
ASG VAL A 8 6 E Strand -142.93 142.14 13.2 4R55
ASG LYS A 9 7 E Strand -78.61 115.72 100.9 4R55
ASG VAL A 10 8 E Strand -125.60 160.70 2.0 4R55
ASG LYS A 11 9 E Strand -90.65 129.15 104.0 4R55
ASG THR A 12 10 T Turn -80.47 162.79 11.0 4R55
ASG PRO A 13 11 T Turn -61.41 -23.68 98.9 4R55
ASG ALA A 14 12 T Turn -68.06 -18.06 67.7 4R55
ASG GLY A 15 13 T Turn 98.35 10.48 41.9 4R55
ASG LYS A 16 14 C Coil -97.95 151.06 130.7 4R55
ASG GLU A 17 15 E Strand -84.24 134.58 116.9 4R55
ASG ALA A 18 16 E Strand -136.01 146.50 23.5 4R55
ASG GLU A 19 17 E Strand -93.86 108.05 132.0 4R55
ASG LEU A 20 18 E Strand -127.95 156.82 18.4 4R55
ASG VAL A 21 19 C Coil -103.52 113.26 73.1 4R55
ASG PRO A 22 20 T Turn -64.03 148.20 2.3 4R55
ASG GLU A 23 21 T Turn -77.39 -29.29 107.8 4R55
ASG LYS A 24 22 E Strand -159.47 140.52 129.9 4R55
ASG VAL A 25 23 E Strand -138.29 151.89 11.0 4R55
ASG TRP A 26 24 E Strand -160.22 163.54 72.6 4R55
ASG ALA A 27 25 E Strand -88.80 114.84 61.7 4R55
ASG LEU A 28 26 E Strand -95.35 89.84 107.7 4R55
ASG GLY A 29 27 T Turn 48.76 -122.79 61.7 4R55
ASG ARG A 30 28 T Turn -78.58 -25.04 231.2 4R55
ASG VAL A 31 29 E Strand -85.38 128.03 59.2 4R55
ASG LYS A 32 30 E Strand -86.48 131.26 43.5 4R55
ASG ILE A 33 31 E Strand -125.98 138.24 23.1 4R55
ASG GLY A 34 32 E Strand -118.38 148.40 0.0 4R55
ASG LEU A 35 33 E Strand -100.79 120.88 28.9 4R55
ASG PHE A 36 34 E Strand -122.94 153.96 0.4 4R55
ASG LYS A 37 35 E Strand -116.28 124.60 95.5 4R55
ASG ASP A 38 36 T Turn -71.69 118.79 8.0 4R55
ASG PRO A 39 37 T Turn -62.24 -37.59 95.2 4R55
ASG GLU A 40 38 T Turn -66.86 -46.51 159.9 4R55
ASG THR A 41 39 T Turn -96.04 -21.48 71.6 4R55
ASG GLY A 42 40 T Turn 80.40 1.87 38.3 4R55
ASG LYS A 43 41 C Coil -95.79 140.93 154.2 4R55
ASG TYR A 44 42 E Strand -79.44 145.69 119.5 4R55
ASG PHE A 45 43 E Strand -153.64 155.18 18.5 4R55
ASG ARG A 46 44 E Strand -104.91 154.19 155.3 4R55
ASG HIS A 47 45 E Strand -158.60 143.27 54.8 4R55
ASG LYS A 48 46 E Strand -58.26 141.27 100.4 4R55
ASG LEU A 49 47 C Coil -106.57 161.14 2.5 4R55
ASG PRO A 50 48 T Turn -58.45 149.26 53.7 4R55
ASG ASP A 51 49 T Turn -64.98 -23.78 116.0 4R55
ASG ASP A 52 50 T Turn -91.49 3.92 122.1 4R55
ASG TYR A 53 51 T Turn -70.14 144.02 3.4 4R55
ASG PRO A 54 52 C Coil -75.23 127.51 59.9 4R55
ASG ILE A 55 53 C Coil -103.41 360.00 111.2 4R55