Документ взят из кэша поисковой машины. Адрес оригинального документа : http://kodomo.fbb.msu.ru/hg/allpy/raw-rev/71e60ae2cd1a Дата изменения: Unknown Дата индексирования: Tue Oct 2 07:50:00 2012 Кодировка:

# HG changeset patch
# User Boris Burkov
# Date 1338895363 -14400
# Node ID 71e60ae2cd1a1e77c9c0eb81de3c0fd5fde092c6
# Parent 6c7e74a75d1351794b01b86bdbe018428e501694
Check, whether alignment_index_markup was already created in blocks_finder.

diff -r 6c7e74a75d13 -r 71e60ae2cd1a sequence_based_blocks_search/blocks_finder.py
--- a/sequence_based_blocks_search/blocks_finder.py Tue Apr 03 12:25:56 2012 +0400
+++ b/sequence_based_blocks_search/blocks_finder.py Tue Jun 05 15:22:43 2012 +0400
@@ -464,7 +464,10 @@
blocks = main(input_file)
if blocks == []:
sys.exit()
- aim = blocks[0].alignment.add_markup('index') #create markup
+ if 'index' not in alignment.markups:
+ aim = blocks[0].alignment.add_markup('index') #create markup
+ else:
+ aim = blocks[0].alignment.markups['index']
file_content=""
for index, block in enumerate(blocks):
for sequence in block.sequences: