Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.ru/npidb/pdb/pdb_new/stride/3gat.std.txt Дата изменения: Tue Jan 18 02:37:05 2011 Дата индексирования: Fri Feb 11 18:02:15 2011 Кодировка:

REM -------------------------------------------------------------------- 3GAT
REM 3GAT
REM STRIDE: Knowledge-based secondary structure assignment 3GAT
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 3GAT
REM 3GAT
REM Residue accessible surface area calculation 3GAT
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 3GAT
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 3GAT
REM 3GAT
REM ------------------------ General information ----------------------- 3GAT
REM 3GAT
HDR TRANSCRIPTION/DNA 07-NOV-97 3GAT 3GAT
CMP MOL_ID: 1; 3GAT
CMP MOLECULE: DNA (5'- 3GAT
CMP D(*GP*TP*TP*GP*CP*AP*GP*AP*TP*AP*AP*AP*CP*AP*TP*T)-3'); 3GAT
CMP CHAIN: B; 3GAT
CMP ENGINEERED: YES; 3GAT
CMP MOL_ID: 2; 3GAT
CMP MOLECULE: DNA (5'- 3GAT
CMP D(*AP*AP*TP*GP*TP*TP*TP*AP*TP*CP*TP*GP*CP*AP*AP*C)-3'); 3GAT
CMP CHAIN: C; 3GAT
CMP ENGINEERED: YES; 3GAT
CMP MOL_ID: 3; 3GAT
CMP MOLECULE: ERYTHROID TRANSCRIPTION FACTOR GATA-1; 3GAT
CMP CHAIN: A; 3GAT
CMP FRAGMENT: C-TERMINAL DOMAIN; 3GAT
CMP ENGINEERED: YES 3GAT
SRC MOL_ID: 1; 3GAT
SRC SYNTHETIC: YES; 3GAT
SRC MOL_ID: 2; 3GAT
SRC SYNTHETIC: YES; 3GAT
SRC MOL_ID: 3; 3GAT
SRC ORGANISM_SCIENTIFIC: GALLUS GALLUS; 3GAT
SRC ORGANISM_COMMON: CHICKEN; 3GAT
SRC ORGANISM_TAXID: 9031; 3GAT
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 3GAT
SRC EXPRESSION_SYSTEM_TAXID: 562 3GAT
AUT G.M.CLORE,N.TJANDRA,M.STARICH,J.G.OMICHINSKI,A.M.GRONENBORN 3GAT
REM 3GAT
REM -------------------- Secondary structure summary ------------------- 3GAT
REM 3GAT
CHN /data/npidb/pdb/pdb_new/all/pdb3gat.pdb A 3GAT
REM 3GAT
REM . . . . . 3GAT
SEQ 1 KRAGTVCSNCQTSTTTLWRRSPMGDPVCNACGLYYKLHQVNRPLTMRKDG 50 3GAT
STR TTTT TTTTTTTTTTTEEEETTTEEEEHHHHHHHHHH TTTTTTTT 3GAT
REM 3GAT
REM . 3GAT
SEQ 51 IQTRNRKVSSKGKKRR 66 3GAT
STR T 3GAT
REM 3GAT
REM 3GAT
REM 3GAT
LOC AlphaHelix ASN 29 A HIS 38 A 3GAT
LOC Strand TRP 18 A SER 21 A 3GAT
LOC Strand ASP 25 A CYS 28 A 3GAT
LOC TurnII ARG 2 A THR 5 A 3GAT
LOC TurnI CYS 7 A CYS 10 A 3GAT
LOC TurnI SER 8 A GLN 11 A 3GAT
LOC TurnIV THR 12 A THR 15 A 3GAT
LOC TurnVIII THR 15 A TRP 18 A 3GAT
LOC TurnI SER 21 A GLY 24 A 3GAT
LOC TurnI PRO 43 A MET 46 A 3GAT
LOC TurnI LEU 44 A ARG 47 A 3GAT
LOC TurnIV LYS 48 A ILE 51 A 3GAT
REM 3GAT
REM --------------- Detailed secondary structure assignment------------- 3GAT
REM 3GAT
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 3GAT
ASG LYS A 1 1 C Coil 360.00 66.65 223.5 3GAT
ASG ARG A 2 2 T Turn -67.40 -40.00 190.5 3GAT
ASG ALA A 3 3 T Turn -49.59 118.34 100.6 3GAT
ASG GLY A 4 4 T Turn 85.21 -11.44 69.5 3GAT
ASG THR A 5 5 T Turn -63.25 119.14 20.1 3GAT
ASG VAL A 6 6 C Coil -121.70 141.74 74.9 3GAT
ASG CYS A 7 7 T Turn -62.94 115.26 0.2 3GAT
ASG SER A 8 8 T Turn -60.30 -39.98 56.8 3GAT
ASG ASN A 9 9 T Turn -74.99 -39.11 47.3 3GAT
ASG CYS A 10 10 T Turn -130.10 14.03 3.0 3GAT
ASG GLN A 11 11 T Turn 57.21 1.16 141.6 3GAT
ASG THR A 12 12 T Turn -61.20 156.86 9.8 3GAT
ASG SER A 13 13 T Turn -133.51 10.01 68.6 3GAT
ASG THR A 14 14 T Turn -112.47 47.52 55.5 3GAT
ASG THR A 15 15 T Turn -75.76 149.03 17.9 3GAT
ASG THR A 16 16 T Turn -75.68 -39.39 96.3 3GAT
ASG LEU A 17 17 T Turn -141.02 132.52 99.7 3GAT
ASG TRP A 18 18 E Strand -80.98 126.27 59.8 3GAT
ASG ARG A 19 19 E Strand -110.49 177.90 96.5 3GAT
ASG ARG A 20 20 E Strand -130.56 141.93 157.3 3GAT
ASG SER A 21 21 E Strand -90.90 160.08 13.0 3GAT
ASG PRO A 22 22 T Turn -55.51 -17.26 121.7 3GAT
ASG MET A 23 23 T Turn -93.85 -12.02 156.7 3GAT
ASG GLY A 24 24 T Turn 94.52 21.81 23.6 3GAT
ASG ASP A 25 25 E Strand -99.01 115.05 54.1 3GAT
ASG PRO A 26 26 E Strand -49.97 139.08 36.3 3GAT
ASG VAL A 27 27 E Strand -140.77 159.64 0.0 3GAT
ASG CYS A 28 28 E Strand -83.06 155.06 8.2 3GAT
ASG ASN A 29 29 H AlphaHelix -49.43 -31.34 33.0 3GAT
ASG ALA A 30 30 H AlphaHelix -71.62 -53.81 49.8 3GAT
ASG CYS A 31 31 H AlphaHelix -58.87 -41.74 7.1 3GAT
ASG GLY A 32 32 H AlphaHelix -56.85 -49.52 16.3 3GAT
ASG LEU A 33 33 H AlphaHelix -69.87 -49.71 74.0 3GAT
ASG TYR A 34 34 H AlphaHelix -60.00 -45.83 83.9 3GAT
ASG TYR A 35 35 H AlphaHelix -60.93 -47.59 63.1 3GAT
ASG LYS A 36 36 H AlphaHelix -60.00 -40.37 154.2 3GAT
ASG LEU A 37 37 H AlphaHelix -72.50 -39.98 117.8 3GAT
ASG HIS A 38 38 H AlphaHelix -113.34 -12.46 118.1 3GAT
ASG GLN A 39 39 C Coil 43.29 57.02 134.0 3GAT
ASG VAL A 40 40 C Coil -150.12 154.82 71.3 3GAT
ASG ASN A 41 41 C Coil -84.15 120.46 134.9 3GAT
ASG ARG A 42 42 C Coil -89.92 139.52 33.1 3GAT
ASG PRO A 43 43 T Turn -60.05 152.45 82.8 3GAT
ASG LEU A 44 44 T Turn -69.22 -1.16 85.0 3GAT
ASG THR A 45 45 T Turn -60.97 -14.88 129.7 3GAT
ASG MET A 46 46 T Turn -98.22 -0.57 124.4 3GAT
ASG ARG A 47 47 T Turn -77.01 136.91 90.5 3GAT
ASG LYS A 48 48 T Turn -123.44 133.27 128.7 3GAT
ASG ASP A 49 49 T Turn -46.27 -83.80 114.4 3GAT
ASG GLY A 50 50 T Turn -69.92 178.74 43.4 3GAT
ASG ILE A 51 51 T Turn -92.19 140.10 80.5 3GAT
ASG GLN A 52 52 C Coil -78.48 149.72 130.5 3GAT
ASG THR A 53 53 C Coil -138.16 159.96 122.6 3GAT
ASG ARG A 54 54 C Coil -152.36 169.84 213.2 3GAT
ASG ASN A 55 55 C Coil -54.79 138.91 147.5 3GAT
ASG ARG A 56 56 C Coil -62.17 130.46 234.7 3GAT
ASG LYS A 57 57 C Coil -52.29 148.99 173.9 3GAT
ASG VAL A 58 58 C Coil -42.11 150.18 114.1 3GAT
ASG SER A 59 59 C Coil -82.39 130.58 121.6 3GAT
ASG SER A 60 60 C Coil -145.61 148.80 88.9 3GAT
ASG LYS A 61 61 C Coil -90.02 -93.24 210.4 3GAT
ASG GLY A 62 62 C Coil -178.89 -175.16 54.3 3GAT
ASG LYS A 63 63 C Coil -126.65 154.08 180.2 3GAT
ASG LYS A 64 64 C Coil -63.86 140.02 212.9 3GAT
ASG ARG A 65 65 C Coil -118.57 149.29 200.9 3GAT
ASG ARG A 66 66 C Coil -65.81 360.00 296.6 3GAT