Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.ru/npidb/pdb/pdb_new/stride/1aay.std.txt Дата изменения: Wed Jan 19 03:28:40 2011 Дата индексирования: Fri Feb 11 17:45:18 2011 Кодировка:

REM -------------------------------------------------------------------- 1AAY
REM 1AAY
REM STRIDE: Knowledge-based secondary structure assignment 1AAY
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 1AAY
REM 1AAY
REM Residue accessible surface area calculation 1AAY
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 1AAY
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 1AAY
REM 1AAY
REM ------------------------ General information ----------------------- 1AAY
REM 1AAY
HDR TRANSCRIPTION/DNA 18-JAN-97 1AAY 1AAY
CMP MOL_ID: 1; 1AAY
CMP MOLECULE: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3'); 1AAY
CMP CHAIN: B; 1AAY
CMP ENGINEERED: YES; 1AAY
CMP MOL_ID: 2; 1AAY
CMP MOLECULE: DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3'); 1AAY
CMP CHAIN: C; 1AAY
CMP ENGINEERED: YES; 1AAY
CMP MOL_ID: 3; 1AAY
CMP MOLECULE: PROTEIN (ZIF268 ZINC FINGER PEPTIDE); 1AAY
CMP CHAIN: A; 1AAY
CMP ENGINEERED: YES 1AAY
SRC MOL_ID: 1; 1AAY
SRC SYNTHETIC: YES; 1AAY
SRC MOL_ID: 2; 1AAY
SRC SYNTHETIC: YES; 1AAY
SRC MOL_ID: 3; 1AAY
SRC ORGANISM_SCIENTIFIC: MUS MUSCULUS; 1AAY
SRC ORGANISM_COMMON: HOUSE MOUSE; 1AAY
SRC ORGANISM_TAXID: 10090; 1AAY
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); 1AAY
SRC EXPRESSION_SYSTEM_TAXID: 469008; 1AAY
SRC EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); 1AAY
SRC EXPRESSION_SYSTEM_PLASMID: PZIF89 1AAY
AUT M.ELROD-ERICKSON,M.A.ROULD,C.O.PABO 1AAY
REM 1AAY
REM -------------------- Secondary structure summary ------------------- 1AAY
REM 1AAY
CHN /data/npidb/pdb/pdb_new/all/pdb1aay.pdb A 1AAY
REM 1AAY
REM . . . . . 1AAY
SEQ 1 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 50 1AAY
STR EE TTTT EE HHHHHHHHHHHH EETTTTT EE HHHHHH 1AAY
REM 1AAY
REM . . . 1AAY
SEQ 51 HIRTHTGEKPFACDICGRKFARSDERKRHTKIHLR 85 1AAY
STR HHHHHH EETTTTT EE HHHHHHHHGGG 1AAY
REM 1AAY
REM 1AAY
REM 1AAY
LOC AlphaHelix SER 119 A THR 130 A 1AAY
LOC AlphaHelix SER 147 A THR 158 A 1AAY
LOC AlphaHelix SER 175 A THR 182 A 1AAY
LOC 310Helix LYS 183 A HIS 185 A 1AAY
LOC Strand TYR 105 A ALA 106 A 1AAY
LOC Strand ARG 115 A PHE 116 A 1AAY
LOC Strand PHE 135 A GLN 136 A 1AAY
LOC Strand ASN 143 A PHE 144 A 1AAY
LOC Strand PHE 163 A ALA 164 A 1AAY
LOC Strand LYS 171 A PHE 172 A 1AAY
LOC TurnI VAL 109 A CYS 112 A 1AAY
LOC TurnIV CYS 137 A CYS 140 A 1AAY
LOC TurnI ARG 138 A MET 141 A 1AAY
LOC TurnIV CYS 165 A CYS 168 A 1AAY
LOC TurnI ASP 166 A GLY 169 A 1AAY
REM 1AAY
REM --------------- Detailed secondary structure assignment------------- 1AAY
REM 1AAY
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 1AAY
ASG ARG A 103 1 C Coil 360.00 84.86 174.3 1AAY
ASG PRO A 104 2 C Coil -77.07 -1.35 93.9 1AAY
ASG TYR A 105 3 E Strand -116.82 100.50 90.7 1AAY
ASG ALA A 106 4 E Strand -94.95 147.20 41.4 1AAY
ASG CYS A 107 5 C Coil -74.65 129.37 10.8 1AAY
ASG PRO A 108 6 C Coil -72.17 -16.06 99.5 1AAY
ASG VAL A 109 7 T Turn -68.23 117.71 35.1 1AAY
ASG GLU A 110 8 T Turn -51.74 -34.72 173.7 1AAY
ASG SER A 111 9 T Turn -74.73 -18.29 102.1 1AAY
ASG CYS A 112 10 T Turn -109.62 148.66 18.7 1AAY
ASG ASP A 113 11 C Coil -134.09 45.23 148.8 1AAY
ASG ARG A 114 12 C Coil -89.27 140.57 131.7 1AAY
ASG ARG A 115 13 E Strand -126.72 147.39 127.0 1AAY
ASG PHE A 116 14 E Strand -133.37 156.91 20.2 1AAY
ASG SER A 117 15 C Coil -74.51 -41.08 69.2 1AAY
ASG ARG A 118 16 C Coil -116.46 154.61 147.2 1AAY
ASG SER A 119 17 H AlphaHelix -64.50 -34.31 63.1 1AAY
ASG ASP A 120 18 H AlphaHelix -66.24 -27.62 75.1 1AAY
ASG GLU A 121 19 H AlphaHelix -69.75 -34.33 52.7 1AAY
ASG LEU A 122 20 H AlphaHelix -70.20 -42.23 30.1 1AAY
ASG THR A 123 21 H AlphaHelix -63.52 -40.40 83.0 1AAY
ASG ARG A 124 22 H AlphaHelix -66.72 -44.31 107.5 1AAY
ASG HIS A 125 23 H AlphaHelix -62.53 -41.57 22.7 1AAY
ASG ILE A 126 24 H AlphaHelix -49.49 -32.05 42.3 1AAY
ASG ARG A 127 25 H AlphaHelix -58.01 -25.07 68.0 1AAY
ASG ILE A 128 26 H AlphaHelix -70.16 -27.63 118.1 1AAY
ASG HIS A 129 27 H AlphaHelix -85.29 -40.46 67.5 1AAY
ASG THR A 130 28 H AlphaHelix -80.96 -17.14 93.2 1AAY
ASG GLY A 131 29 C Coil 75.22 8.35 52.4 1AAY
ASG GLN A 132 30 C Coil -71.99 130.83 108.3 1AAY
ASG LYS A 133 31 C Coil -134.18 87.79 104.5 1AAY
ASG PRO A 134 32 C Coil -60.55 -25.23 58.9 1AAY
ASG PHE A 135 33 E Strand -105.52 130.39 70.7 1AAY
ASG GLN A 136 34 E Strand -117.65 138.10 95.5 1AAY
ASG CYS A 137 35 T Turn -75.35 122.24 0.0 1AAY
ASG ARG A 138 36 T Turn -60.22 -27.12 230.7 1AAY
ASG ILE A 139 37 T Turn -85.51 -60.79 97.1 1AAY
ASG CYS A 140 38 T Turn -97.39 -3.81 58.7 1AAY
ASG MET A 141 39 T Turn 72.54 3.17 108.4 1AAY
ASG ARG A 142 40 C Coil -70.73 143.76 155.7 1AAY
ASG ASN A 143 41 E Strand -98.72 151.19 69.4 1AAY
ASG PHE A 144 42 E Strand -134.73 151.55 28.5 1AAY
ASG SER A 145 43 C Coil -74.85 -24.76 44.8 1AAY
ASG ARG A 146 44 C Coil -134.27 151.75 64.6 1AAY
ASG SER A 147 45 H AlphaHelix -69.35 -42.87 64.3 1AAY
ASG ASP A 148 46 H AlphaHelix -64.74 -35.33 71.1 1AAY
ASG HIS A 149 47 H AlphaHelix -72.68 -27.88 82.5 1AAY
ASG LEU A 150 48 H AlphaHelix -70.66 -40.98 26.1 1AAY
ASG THR A 151 49 H AlphaHelix -58.58 -46.57 75.7 1AAY
ASG THR A 152 50 H AlphaHelix -74.02 -31.41 33.6 1AAY
ASG HIS A 153 51 H AlphaHelix -62.73 -41.53 31.9 1AAY
ASG ILE A 154 52 H AlphaHelix -57.66 -30.05 50.3 1AAY
ASG ARG A 155 53 H AlphaHelix -62.02 -22.56 41.4 1AAY
ASG THR A 156 54 H AlphaHelix -69.26 -22.37 100.4 1AAY
ASG HIS A 157 55 H AlphaHelix -89.70 -45.01 76.0 1AAY
ASG THR A 158 56 H AlphaHelix -80.08 -24.51 84.7 1AAY
ASG GLY A 159 57 C Coil 79.70 15.06 54.3 1AAY
ASG GLU A 160 58 C Coil -74.42 130.20 98.3 1AAY
ASG LYS A 161 59 C Coil -137.39 87.59 101.5 1AAY
ASG PRO A 162 60 C Coil -71.44 -13.72 69.3 1AAY
ASG PHE A 163 61 E Strand -111.67 117.49 56.2 1AAY
ASG ALA A 164 62 E Strand -110.59 146.72 41.4 1AAY
ASG CYS A 165 63 T Turn -70.48 130.55 4.3 1AAY
ASG ASP A 166 64 T Turn -64.94 -26.56 164.5 1AAY
ASG ILE A 167 65 T Turn -87.55 -46.18 114.1 1AAY
ASG CYS A 168 66 T Turn -116.70 -2.32 70.0 1AAY
ASG GLY A 169 67 T Turn 74.52 2.90 42.9 1AAY
ASG ARG A 170 68 C Coil -64.73 134.15 129.9 1AAY
ASG LYS A 171 69 E Strand -96.89 151.41 123.6 1AAY
ASG PHE A 172 70 E Strand -140.11 155.22 15.1 1AAY
ASG ALA A 173 71 C Coil -77.12 -29.94 17.7 1AAY
ASG ARG A 174 72 C Coil -127.45 149.24 106.5 1AAY
ASG SER A 175 73 H AlphaHelix -63.23 -34.81 56.6 1AAY
ASG ASP A 176 74 H AlphaHelix -70.26 -25.32 78.4 1AAY
ASG GLU A 177 75 H AlphaHelix -72.30 -42.54 58.9 1AAY
ASG ARG A 178 76 H AlphaHelix -64.19 -43.77 77.8 1AAY
ASG LYS A 179 77 H AlphaHelix -59.34 -43.24 138.9 1AAY
ASG ARG A 180 78 H AlphaHelix -64.56 -35.78 181.3 1AAY
ASG HIS A 181 79 H AlphaHelix -74.26 -44.42 24.2 1AAY
ASG THR A 182 80 H AlphaHelix -54.02 -30.71 47.0 1AAY
ASG LYS A 183 81 G 310Helix -57.56 -33.79 115.1 1AAY
ASG ILE A 184 82 G 310Helix -62.50 -19.05 95.5 1AAY
ASG HIS A 185 83 G 310Helix -75.61 -6.41 72.8 1AAY
ASG LEU A 186 84 C Coil -84.25 -45.67 155.3 1AAY
ASG ARG A 187 85 C Coil -178.63 360.00 232.1 1AAY