Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.ru/npidb/pdb/pdb_new/stride/1hdd.std.txt Дата изменения: Tue Jan 18 07:23:42 2011 Дата индексирования: Fri Feb 11 17:47:01 2011 Кодировка:

REM -------------------------------------------------------------------- 1HDD
REM 1HDD
REM STRIDE: Knowledge-based secondary structure assignment 1HDD
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 1HDD
REM 1HDD
REM Residue accessible surface area calculation 1HDD
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 1HDD
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 1HDD
REM 1HDD
REM ------------------------ General information ----------------------- 1HDD
REM 1HDD
HDR TRANSCRIPTION/DNA 16-SEP-91 1HDD 1HDD
CMP MOL_ID: 1; 1HDD
CMP MOLECULE: DNA (5'- 1HDD
CMP D(*TP*TP*TP*TP*GP*CP*CP*AP*TP*GP*TP*AP*AP*TP*TP*AP*C 1HDD
CMP P*CP*TP*AP*A)-3'); 1HDD
CMP CHAIN: A; 1HDD
CMP ENGINEERED: YES; 1HDD
CMP MOL_ID: 2; 1HDD
CMP MOLECULE: DNA (5'- 1HDD
CMP D(*AP*TP*TP*AP*GP*GP*TP*AP*AP*TP*TP*AP*CP*AP*TP*GP*G 1HDD
CMP P*CP*AP*AP*A)-3'); 1HDD
CMP CHAIN: B; 1HDD
CMP ENGINEERED: YES; 1HDD
CMP MOL_ID: 3; 1HDD
CMP MOLECULE: PROTEIN (ENGRAILED HOMEODOMAIN); 1HDD
CMP CHAIN: C, D; 1HDD
CMP ENGINEERED: YES 1HDD
SRC MOL_ID: 1; 1HDD
SRC SYNTHETIC: YES; 1HDD
SRC MOL_ID: 2; 1HDD
SRC SYNTHETIC: YES; 1HDD
SRC MOL_ID: 3; 1HDD
SRC ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; 1HDD
SRC ORGANISM_COMMON: FRUIT FLY; 1HDD
SRC ORGANISM_TAXID: 7227; 1HDD
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 1HDD
SRC EXPRESSION_SYSTEM_TAXID: 562 1HDD
AUT C.R.KISSINGER,B.LIU,E.MARTIN-BLANCO,T.B.KORNBERG C.O.PABO 1HDD
REM 1HDD
REM -------------------- Secondary structure summary ------------------- 1HDD
REM 1HDD
CHN /data/npidb/pdb/pdb_new/all/pdb1hdd.pdb C 1HDD
REM 1HDD
REM . . . . . 1HDD
SEQ 1 RPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNK 50 1HDD
STR HHHHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHHH 1HDD
REM 1HDD
REM 1HDD
SEQ 51 RAKIKKS 57 1HDD
STR HHHHHH 1HDD
REM 1HDD
CHN /data/npidb/pdb/pdb_new/all/pdb1hdd.pdb D 1HDD
REM 1HDD
REM . . . . . 1HDD
SEQ 1 RPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNK 50 1HDD
STR HHHHHHHHHHHTTTT HHHHHHHHHHH HHHHHHHHHHH 1HDD
REM 1HDD
REM 1HDD
SEQ 51 RAKIKKS 57 1HDD
STR HHHHHH 1HDD
REM 1HDD
REM 1HDD
REM 1HDD
LOC AlphaHelix SER 10 C GLU 22 C 1HDD
LOC AlphaHelix GLU 28 C LEU 38 C 1HDD
LOC AlphaHelix GLU 42 C LYS 58 C 1HDD
LOC AlphaHelix SER 10 D PHE 20 D 1HDD
LOC AlphaHelix GLU 28 D LEU 38 D 1HDD
LOC AlphaHelix GLU 42 D LYS 58 D 1HDD
LOC TurnIV PHE 20 D ASN 23 D 1HDD
LOC TurnIV ASN 21 D ARG 24 D 1HDD
REM 1HDD
REM --------------- Detailed secondary structure assignment------------- 1HDD
REM 1HDD
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 1HDD
ASG ARG C 3 1 C Coil 360.00 149.54 275.1 1HDD
ASG PRO C 4 2 C Coil -96.45 82.42 124.7 1HDD
ASG ARG C 5 3 C Coil -75.83 107.06 223.6 1HDD
ASG THR C 6 4 C Coil -57.19 146.10 62.9 1HDD
ASG ALA C 7 5 C Coil -111.77 125.56 87.5 1HDD
ASG PHE C 8 6 C Coil -95.95 143.84 56.5 1HDD
ASG SER C 9 7 C Coil -76.94 143.64 49.8 1HDD
ASG SER C 10 8 H AlphaHelix -49.55 -26.15 90.6 1HDD
ASG GLU C 11 9 H AlphaHelix -91.56 -7.83 159.2 1HDD
ASG GLN C 12 10 H AlphaHelix -91.90 -54.03 30.9 1HDD
ASG LEU C 13 11 H AlphaHelix -49.94 -24.36 61.9 1HDD
ASG ALA C 14 12 H AlphaHelix -76.10 -48.41 52.8 1HDD
ASG ARG C 15 13 H AlphaHelix -73.73 -24.22 108.8 1HDD
ASG LEU C 16 14 H AlphaHelix -65.90 -63.49 0.0 1HDD
ASG LYS C 17 15 H AlphaHelix -45.53 -55.57 108.6 1HDD
ASG ARG C 18 16 H AlphaHelix -52.85 -30.59 48.5 1HDD
ASG GLU C 19 17 H AlphaHelix -82.78 -25.03 5.5 1HDD
ASG PHE C 20 18 H AlphaHelix -80.31 -24.05 8.7 1HDD
ASG ASN C 21 19 H AlphaHelix -70.82 -51.95 125.5 1HDD
ASG GLU C 22 20 H AlphaHelix -66.72 -39.29 151.3 1HDD
ASG ASN C 23 21 C Coil -150.25 105.52 70.1 1HDD
ASG ARG C 24 22 C Coil -81.86 -1.04 103.8 1HDD
ASG TYR C 25 23 C Coil -124.16 114.36 118.0 1HDD
ASG LEU C 26 24 C Coil -75.27 137.36 40.2 1HDD
ASG THR C 27 25 C Coil -97.74 171.36 82.0 1HDD
ASG GLU C 28 26 H AlphaHelix -67.06 -51.27 117.2 1HDD
ASG ARG C 29 27 H AlphaHelix -44.72 -53.98 182.6 1HDD
ASG ARG C 30 28 H AlphaHelix -67.44 -34.80 85.5 1HDD
ASG ARG C 31 29 H AlphaHelix -68.53 -28.15 73.4 1HDD
ASG GLN C 32 30 H AlphaHelix -73.79 -62.47 81.4 1HDD
ASG GLN C 33 31 H AlphaHelix -41.00 -49.89 61.7 1HDD
ASG LEU C 34 32 H AlphaHelix -51.83 -39.61 0.6 1HDD
ASG SER C 35 33 H AlphaHelix -52.20 -62.86 17.5 1HDD
ASG SER C 36 34 H AlphaHelix -38.68 -74.64 100.7 1HDD
ASG GLU C 37 35 H AlphaHelix -45.85 -57.28 110.9 1HDD
ASG LEU C 38 36 H AlphaHelix -83.81 -10.62 26.4 1HDD
ASG GLY C 39 37 C Coil 59.25 52.17 60.1 1HDD
ASG LEU C 40 38 C Coil -132.31 156.98 14.4 1HDD
ASG ASN C 41 39 C Coil -84.83 140.13 108.7 1HDD
ASG GLU C 42 40 H AlphaHelix -51.25 -7.50 65.8 1HDD
ASG ALA C 43 41 H AlphaHelix -96.86 -22.92 61.5 1HDD
ASG GLN C 44 42 H AlphaHelix -84.41 -26.28 38.1 1HDD
ASG ILE C 45 43 H AlphaHelix -73.52 -29.28 0.4 1HDD
ASG LYS C 46 44 H AlphaHelix -62.78 -66.54 92.1 1HDD
ASG ILE C 47 45 H AlphaHelix -56.63 -29.92 73.0 1HDD
ASG TRP C 48 46 H AlphaHelix -58.68 -56.92 36.1 1HDD
ASG PHE C 49 47 H AlphaHelix -56.34 -39.73 2.8 1HDD
ASG GLN C 50 48 H AlphaHelix -58.98 -51.67 76.5 1HDD
ASG ASN C 51 49 H AlphaHelix -63.96 -33.60 104.8 1HDD
ASG LYS C 52 50 H AlphaHelix -61.33 -66.34 67.3 1HDD
ASG ARG C 53 51 H AlphaHelix -38.16 -30.15 51.2 1HDD
ASG ALA C 54 52 H AlphaHelix -70.01 -48.75 46.0 1HDD
ASG LYS C 55 53 H AlphaHelix -75.04 -20.07 136.0 1HDD
ASG ILE C 56 54 H AlphaHelix -69.01 -42.16 74.0 1HDD
ASG LYS C 57 55 H AlphaHelix -63.75 -53.75 159.5 1HDD
ASG LYS C 58 56 H AlphaHelix -75.64 8.36 163.1 1HDD
ASG SER C 59 57 C Coil -142.19 360.00 120.1 1HDD
ASG ARG D 3 1 C Coil 360.00 125.66 119.4 1HDD
ASG PRO D 4 2 C Coil -59.54 136.64 103.9 1HDD
ASG ARG D 5 3 C Coil -57.11 131.31 245.9 1HDD
ASG THR D 6 4 C Coil -125.60 -175.57 73.1 1HDD
ASG ALA D 7 5 C Coil -146.68 128.71 84.9 1HDD
ASG PHE D 8 6 C Coil -83.72 142.09 57.0 1HDD
ASG SER D 9 7 C Coil -76.96 163.35 43.7 1HDD
ASG SER D 10 8 H AlphaHelix -72.37 -13.64 104.6 1HDD
ASG GLU D 11 9 H AlphaHelix -77.87 -29.16 175.6 1HDD
ASG GLN D 12 10 H AlphaHelix -93.19 -48.10 34.1 1HDD
ASG LEU D 13 11 H AlphaHelix -55.93 -29.57 58.5 1HDD
ASG ALA D 14 12 H AlphaHelix -91.52 -1.21 61.6 1HDD
ASG ARG D 15 13 H AlphaHelix -99.00 -21.34 59.9 1HDD
ASG LEU D 16 14 H AlphaHelix -73.57 -45.52 0.0 1HDD
ASG LYS D 17 15 H AlphaHelix -69.65 -17.06 93.4 1HDD
ASG ARG D 18 16 H AlphaHelix -88.92 -20.80 52.2 1HDD
ASG GLU D 19 17 H AlphaHelix -85.26 -34.85 22.7 1HDD
ASG PHE D 20 18 H AlphaHelix -74.18 4.44 10.0 1HDD
ASG ASN D 21 19 T Turn -105.64 -24.07 115.2 1HDD
ASG GLU D 22 20 T Turn -83.63 -31.12 162.1 1HDD
ASG ASN D 23 21 T Turn -170.23 131.37 98.5 1HDD
ASG ARG D 24 22 T Turn -77.75 -11.68 91.6 1HDD
ASG TYR D 25 23 C Coil -106.12 123.90 129.4 1HDD
ASG LEU D 26 24 C Coil -82.24 162.20 35.6 1HDD
ASG THR D 27 25 C Coil -125.09 155.10 89.5 1HDD
ASG GLU D 28 26 H AlphaHelix -52.83 -55.16 130.5 1HDD
ASG ARG D 29 27 H AlphaHelix -64.46 -32.31 164.8 1HDD
ASG ARG D 30 28 H AlphaHelix -80.01 -21.88 76.8 1HDD
ASG ARG D 31 29 H AlphaHelix -70.91 -43.45 59.3 1HDD
ASG GLN D 32 30 H AlphaHelix -53.99 -75.38 81.2 1HDD
ASG GLN D 33 31 H AlphaHelix -28.54 -51.22 78.8 1HDD
ASG LEU D 34 32 H AlphaHelix -68.65 -29.08 0.2 1HDD
ASG SER D 35 33 H AlphaHelix -71.63 -39.84 16.0 1HDD
ASG SER D 36 34 H AlphaHelix -79.12 -16.24 103.2 1HDD
ASG GLU D 37 35 H AlphaHelix -84.55 -63.00 112.2 1HDD
ASG LEU D 38 36 H AlphaHelix -77.41 -5.48 23.5 1HDD
ASG GLY D 39 37 C Coil 68.01 19.32 61.9 1HDD
ASG LEU D 40 38 C Coil -91.53 176.81 21.8 1HDD
ASG ASN D 41 39 C Coil -103.10 129.97 100.5 1HDD
ASG GLU D 42 40 H AlphaHelix -37.34 -58.07 63.1 1HDD
ASG ALA D 43 41 H AlphaHelix -58.67 -15.08 48.6 1HDD
ASG GLN D 44 42 H AlphaHelix -84.83 -31.42 35.4 1HDD
ASG ILE D 45 43 H AlphaHelix -70.46 -47.21 0.0 1HDD
ASG LYS D 46 44 H AlphaHelix -53.89 -44.62 94.7 1HDD
ASG ILE D 47 45 H AlphaHelix -77.13 -28.16 70.7 1HDD
ASG TRP D 48 46 H AlphaHelix -62.98 -46.31 25.5 1HDD
ASG PHE D 49 47 H AlphaHelix -59.31 -50.63 4.2 1HDD
ASG GLN D 50 48 H AlphaHelix -49.54 -54.56 83.2 1HDD
ASG ASN D 51 49 H AlphaHelix -60.05 -43.74 99.0 1HDD
ASG LYS D 52 50 H AlphaHelix -65.32 -47.03 53.7 1HDD
ASG ARG D 53 51 H AlphaHelix -55.23 -48.93 41.7 1HDD
ASG ALA D 54 52 H AlphaHelix -58.09 -34.86 64.6 1HDD
ASG LYS D 55 53 H AlphaHelix -72.66 -58.43 148.2 1HDD
ASG ILE D 56 54 H AlphaHelix -45.06 -44.53 60.9 1HDD
ASG LYS D 57 55 H AlphaHelix -46.89 -67.65 117.7 1HDD
ASG LYS D 58 56 H AlphaHelix -23.54 -20.00 198.2 1HDD
ASG SER D 59 57 C Coil -72.32 360.00 148.7 1HDD