Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.ru/npidb/pdb/pdb_new/stride/1jk2.std.txt Дата изменения: Fri Jan 21 14:47:21 2011 Дата индексирования: Fri Feb 11 17:47:40 2011 Кодировка:

REM -------------------------------------------------------------------- 1JK2
REM 1JK2
REM STRIDE: Knowledge-based secondary structure assignment 1JK2
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 1JK2
REM 1JK2
REM Residue accessible surface area calculation 1JK2
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 1JK2
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 1JK2
REM 1JK2
REM ------------------------ General information ----------------------- 1JK2
REM 1JK2
HDR TRANSCRIPTION/DNA 11-JUL-01 1JK2 1JK2
CMP MOL_ID: 1; 1JK2
CMP MOLECULE: 5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*TP*G)-3'; 1JK2
CMP CHAIN: B; 1JK2
CMP ENGINEERED: YES; 1JK2
CMP MOL_ID: 2; 1JK2
CMP MOLECULE: 5'-D(*TP*CP*AP*GP*CP*CP*CP*AP*CP*GP*C)-3'; 1JK2
CMP CHAIN: C; 1JK2
CMP ENGINEERED: YES; 1JK2
CMP MOL_ID: 3; 1JK2
CMP MOLECULE: ZIF268; 1JK2
CMP CHAIN: A; 1JK2
CMP FRAGMENT: ZINC FINGERS (RESIDUES 333-421); 1JK2
CMP SYNONYM: EARLY GROWTH RESPONSE PROTEIN 1; 1JK2
CMP ENGINEERED: YES; 1JK2
CMP MUTATION: YES 1JK2
SRC MOL_ID: 1; 1JK2
SRC SYNTHETIC: YES; 1JK2
SRC MOL_ID: 2; 1JK2
SRC SYNTHETIC: YES; 1JK2
SRC MOL_ID: 3; 1JK2
SRC ORGANISM_SCIENTIFIC: MUS MUSCULUS; 1JK2
SRC ORGANISM_COMMON: HOUSE MOUSE; 1JK2
SRC ORGANISM_TAXID: 10090; 1JK2
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); 1JK2
SRC EXPRESSION_SYSTEM_TAXID: 469008; 1JK2
SRC EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); 1JK2
SRC EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; 1JK2
SRC EXPRESSION_SYSTEM_PLASMID: PZIFD20A 1JK2
AUT J.C.MILLER,C.O.PABO 1JK2
REM 1JK2
REM -------------------- Secondary structure summary ------------------- 1JK2
REM 1JK2
CHN /data/npidb/pdb/pdb_new/all/pdb1jk2.pdb A 1JK2
REM 1JK2
REM . . . . . 1JK2
SEQ 1 RPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 50 1JK2
STR EE TTTT EE HHHHHHHHHHHH EETTTTT EE HHHHHH 1JK2
REM 1JK2
REM . . . 1JK2
SEQ 51 HIRTHTGEKPFACDICGRKFARSDERKRHTKIHLR 85 1JK2
STR HHHHHH EETTTTT EE HHHHHHHHGGG 1JK2
REM 1JK2
REM 1JK2
REM 1JK2
LOC AlphaHelix SER 119 A THR 130 A 1JK2
LOC AlphaHelix SER 147 A THR 158 A 1JK2
LOC AlphaHelix SER 175 A THR 182 A 1JK2
LOC 310Helix LYS 183 A HIS 185 A 1JK2
LOC Strand TYR 105 A ALA 106 A 1JK2
LOC Strand ARG 115 A PHE 116 A 1JK2
LOC Strand PHE 135 A GLN 136 A 1JK2
LOC Strand ASN 143 A PHE 144 A 1JK2
LOC Strand PHE 163 A ALA 164 A 1JK2
LOC Strand LYS 171 A PHE 172 A 1JK2
LOC TurnI VAL 109 A CYS 112 A 1JK2
LOC TurnIV CYS 137 A CYS 140 A 1JK2
LOC TurnI ARG 138 A MET 141 A 1JK2
LOC TurnI CYS 165 A CYS 168 A 1JK2
LOC TurnI ASP 166 A GLY 169 A 1JK2
REM 1JK2
REM --------------- Detailed secondary structure assignment------------- 1JK2
REM 1JK2
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 1JK2
ASG ARG A 103 1 C Coil 360.00 74.95 180.4 1JK2
ASG PRO A 104 2 C Coil -74.55 -6.58 91.0 1JK2
ASG TYR A 105 3 E Strand -136.50 130.63 110.0 1JK2
ASG ALA A 106 4 E Strand -114.43 174.96 42.4 1JK2
ASG CYS A 107 5 C Coil -93.87 120.42 16.0 1JK2
ASG PRO A 108 6 C Coil -60.52 -40.81 96.2 1JK2
ASG VAL A 109 7 T Turn -56.97 116.93 41.6 1JK2
ASG GLU A 110 8 T Turn -57.10 -28.47 185.6 1JK2
ASG SER A 111 9 T Turn -83.33 26.91 100.3 1JK2
ASG CYS A 112 10 T Turn -152.90 135.34 30.2 1JK2
ASG ASP A 113 11 C Coil -111.50 53.61 151.4 1JK2
ASG ARG A 114 12 C Coil -102.95 150.89 135.1 1JK2
ASG ARG A 115 13 E Strand -141.95 138.08 115.5 1JK2
ASG PHE A 116 14 E Strand -128.56 158.95 30.5 1JK2
ASG SER A 117 15 C Coil -80.09 -35.35 63.0 1JK2
ASG ARG A 118 16 C Coil -115.56 172.89 137.5 1JK2
ASG SER A 119 17 H AlphaHelix -90.82 -28.40 55.7 1JK2
ASG ALA A 120 18 H AlphaHelix -69.60 -26.48 67.0 1JK2
ASG GLU A 121 19 H AlphaHelix -78.53 -37.78 42.8 1JK2
ASG LEU A 122 20 H AlphaHelix -72.14 -31.91 27.3 1JK2
ASG THR A 123 21 H AlphaHelix -71.17 -37.70 89.7 1JK2
ASG ARG A 124 22 H AlphaHelix -72.02 -39.44 94.3 1JK2
ASG HIS A 125 23 H AlphaHelix -63.08 -44.55 17.7 1JK2
ASG ILE A 126 24 H AlphaHelix -50.07 -26.15 35.9 1JK2
ASG ARG A 127 25 H AlphaHelix -60.76 -26.82 64.8 1JK2
ASG ILE A 128 26 H AlphaHelix -56.95 -44.06 122.2 1JK2
ASG HIS A 129 27 H AlphaHelix -82.53 -37.64 70.3 1JK2
ASG THR A 130 28 H AlphaHelix -80.46 -16.37 78.4 1JK2
ASG GLY A 131 29 C Coil 74.51 10.47 51.4 1JK2
ASG GLN A 132 30 C Coil -59.20 129.63 85.4 1JK2
ASG LYS A 133 31 C Coil -136.22 77.35 112.7 1JK2
ASG PRO A 134 32 C Coil -64.90 -18.30 70.2 1JK2
ASG PHE A 135 33 E Strand -109.88 116.32 63.5 1JK2
ASG GLN A 136 34 E Strand -104.35 143.45 97.8 1JK2
ASG CYS A 137 35 T Turn -88.99 122.68 0.4 1JK2
ASG ARG A 138 36 T Turn -74.07 -17.90 222.9 1JK2
ASG ILE A 139 37 T Turn -79.26 -50.49 95.3 1JK2
ASG CYS A 140 38 T Turn -111.01 -3.76 58.7 1JK2
ASG MET A 141 39 T Turn 72.37 3.95 99.4 1JK2
ASG ARG A 142 40 C Coil -70.75 137.48 150.1 1JK2
ASG ASN A 143 41 E Strand -95.96 150.56 66.6 1JK2
ASG PHE A 144 42 E Strand -131.19 148.79 26.1 1JK2
ASG SER A 145 43 C Coil -72.76 -24.88 47.2 1JK2
ASG ARG A 146 44 C Coil -130.63 141.48 68.2 1JK2
ASG SER A 147 45 H AlphaHelix -64.06 -40.98 64.5 1JK2
ASG ASP A 148 46 H AlphaHelix -64.39 -35.85 71.3 1JK2
ASG HIS A 149 47 H AlphaHelix -75.50 -27.60 85.6 1JK2
ASG LEU A 150 48 H AlphaHelix -68.63 -44.14 23.5 1JK2
ASG THR A 151 49 H AlphaHelix -55.94 -51.16 71.8 1JK2
ASG THR A 152 50 H AlphaHelix -67.54 -36.26 31.6 1JK2
ASG HIS A 153 51 H AlphaHelix -59.66 -40.40 33.1 1JK2
ASG ILE A 154 52 H AlphaHelix -60.34 -28.34 52.1 1JK2
ASG ARG A 155 53 H AlphaHelix -65.26 -17.99 45.2 1JK2
ASG THR A 156 54 H AlphaHelix -70.70 -23.95 98.4 1JK2
ASG HIS A 157 55 H AlphaHelix -91.19 -47.49 75.7 1JK2
ASG THR A 158 56 H AlphaHelix -73.70 -27.50 82.3 1JK2
ASG GLY A 159 57 C Coil 80.50 12.53 48.0 1JK2
ASG GLU A 160 58 C Coil -68.25 130.10 105.4 1JK2
ASG LYS A 161 59 C Coil -136.04 85.71 115.2 1JK2
ASG PRO A 162 60 C Coil -69.25 -17.59 61.7 1JK2
ASG PHE A 163 61 E Strand -111.21 108.07 53.1 1JK2
ASG ALA A 164 62 E Strand -99.46 136.92 36.2 1JK2
ASG CYS A 165 63 T Turn -64.43 132.64 4.6 1JK2
ASG ASP A 166 64 T Turn -63.24 -28.99 157.4 1JK2
ASG ILE A 167 65 T Turn -88.10 -43.89 116.3 1JK2
ASG CYS A 168 66 T Turn -118.13 -7.93 71.3 1JK2
ASG GLY A 169 67 T Turn 79.78 -0.78 40.0 1JK2
ASG ARG A 170 68 C Coil -59.45 132.29 156.0 1JK2
ASG LYS A 171 69 E Strand -95.39 149.26 129.9 1JK2
ASG PHE A 172 70 E Strand -137.86 148.92 27.7 1JK2
ASG ALA A 173 71 C Coil -64.90 -36.20 15.7 1JK2
ASG ARG A 174 72 C Coil -122.54 153.05 100.7 1JK2
ASG SER A 175 73 H AlphaHelix -64.14 -37.54 63.8 1JK2
ASG ASP A 176 74 H AlphaHelix -69.90 -26.89 76.6 1JK2
ASG GLU A 177 75 H AlphaHelix -68.63 -43.76 53.2 1JK2
ASG ARG A 178 76 H AlphaHelix -63.84 -39.90 72.0 1JK2
ASG LYS A 179 77 H AlphaHelix -61.72 -42.49 135.5 1JK2
ASG ARG A 180 78 H AlphaHelix -64.73 -38.29 182.4 1JK2
ASG HIS A 181 79 H AlphaHelix -71.18 -45.77 17.9 1JK2
ASG THR A 182 80 H AlphaHelix -51.59 -36.38 45.6 1JK2
ASG LYS A 183 81 G 310Helix -58.24 -26.81 118.9 1JK2
ASG ILE A 184 82 G 310Helix -67.07 -10.01 93.0 1JK2
ASG HIS A 185 83 G 310Helix -83.71 -2.04 70.7 1JK2
ASG LEU A 186 84 C Coil -89.91 -52.40 159.5 1JK2
ASG ARG A 187 85 C Coil -164.74 360.00 238.4 1JK2