Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/stride/3muv.std.txt Дата изменения: Wed May 23 18:47:21 2012 Дата индексирования: Tue Oct 2 12:32:44 2012 Кодировка:

REM -------------------------------------------------------------------- 3MUV
REM 3MUV
REM STRIDE: Knowledge-based secondary structure assignment 3MUV
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 3MUV
REM 3MUV
REM Residue accessible surface area calculation 3MUV
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 3MUV
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 3MUV
REM 3MUV
REM ------------------------ General information ----------------------- 3MUV
REM 3MUV
HDR RNA BINDING PROTEIN/RNA 03-MAY-10 3MUV 3MUV
CMP MOL_ID: 1; 3MUV
CMP MOLECULE: U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A; 3MUV
CMP CHAIN: P; 3MUV
CMP FRAGMENT: UNP RESIDUES 1-98; 3MUV
CMP SYNONYM: U1 SNRNP A, U1-A, U1A; 3MUV
CMP ENGINEERED: YES; 3MUV
CMP MUTATION: YES; 3MUV
CMP MOL_ID: 2; 3MUV
CMP MOLECULE: G20A/C92U MUTANT C-DI-GMP RIBOSWITCH; 3MUV
CMP CHAIN: R; 3MUV
CMP ENGINEERED: YES 3MUV
SRC MOL_ID: 1; 3MUV
SRC ORGANISM_SCIENTIFIC: HOMO SAPIENS; 3MUV
SRC ORGANISM_COMMON: HUMAN; 3MUV
SRC ORGANISM_TAXID: 9606; 3MUV
SRC GENE: SNRPA; 3MUV
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 3MUV
SRC EXPRESSION_SYSTEM_TAXID: 511693; 3MUV
SRC EXPRESSION_SYSTEM_STRAIN: BL21; 3MUV
SRC EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; 3MUV
SRC EXPRESSION_SYSTEM_PLASMID: PET11; 3MUV
SRC MOL_ID: 2; 3MUV
SRC SYNTHETIC: YES; 3MUV
SRC OTHER_DETAILS: IN VITRO TRANSCRIBED FROM LINEAR DNA 3MUV
AUT S.A.STROBEL,K.D.SMITH 3MUV
REM 3MUV
REM -------------------- Secondary structure summary ------------------- 3MUV
REM 3MUV
CHN /data/npidb/pdb/pdb_new/all/pdb3muv.pdb P 3MUV
REM 3MUV
REM . . . . . 3MUV
SEQ 1 RPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAF 50 3MUV
STR EEEEE TTTT HHHHHHHHHHHHGGG EEEEEE TTTTTTTEE 3MUV
REM 3MUV
REM . . . . 3MUV
SEQ 51 VIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAK 90 3MUV
STR EEETTHHHHHHHHHHHTTEEETTEEEEEEETTTTTTTTT 3MUV
REM 3MUV
REM 3MUV
REM 3MUV
LOC AlphaHelix LYS 23 P PHE 34 P 3MUV
LOC AlphaHelix VAL 62 P MET 72 P 3MUV
LOC 310Helix SER 35 P PHE 37 P 3MUV
LOC Strand THR 11 P ASN 15 P 3MUV
LOC Strand ILE 40 P VAL 45 P 3MUV
LOC Strand ALA 55 P PHE 59 P 3MUV
LOC Strand PHE 75 P PHE 77 P 3MUV
LOC Strand LYS 80 P TYR 86 P 3MUV
LOC TurnI ASN 18 P ILE 21 P 3MUV
LOC TurnI SER 48 P MET 51 P 3MUV
LOC TurnI LEU 49 P ARG 52 P 3MUV
LOC TurnII MET 51 P GLN 54 P 3MUV
LOC TurnVIII PHE 59 P VAL 62 P 3MUV
LOC TurnII MET 72 P PHE 75 P 3MUV
LOC TurnIV PRO 76 P ASP 79 P 3MUV
LOC TurnI' PHE 77 P LYS 80 P 3MUV
LOC TurnVIII ALA 87 P ASP 90 P 3MUV
LOC TurnI SER 91 P ILE 94 P 3MUV
LOC TurnI ASP 92 P ALA 95 P 3MUV
REM 3MUV
REM --------------- Detailed secondary structure assignment------------- 3MUV
REM 3MUV
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 3MUV
ASG ARG P 7 1 C Coil 360.00 -48.86 252.3 3MUV
ASG PRO P 8 2 C Coil -66.70 145.72 77.3 3MUV
ASG ASN P 9 3 C Coil -151.23 156.86 9.9 3MUV
ASG HIS P 10 4 C Coil -50.79 -33.93 45.9 3MUV
ASG THR P 11 5 E Strand -100.07 136.13 0.0 3MUV
ASG ILE P 12 6 E Strand -109.17 140.08 0.0 3MUV
ASG TYR P 13 7 E Strand -95.83 131.54 52.1 3MUV
ASG ILE P 14 8 E Strand -131.23 111.56 0.0 3MUV
ASG ASN P 15 9 E Strand -120.54 -175.68 39.5 3MUV
ASG ASN P 16 10 C Coil 71.20 20.01 63.3 3MUV
ASG LEU P 17 11 C Coil -76.19 151.85 0.8 3MUV
ASG ASN P 18 12 T Turn -65.53 129.55 44.2 3MUV
ASG GLU P 19 13 T Turn -84.34 -23.01 102.8 3MUV
ASG LYS P 20 14 T Turn -70.32 -7.59 186.2 3MUV
ASG ILE P 21 15 T Turn -83.23 140.82 19.9 3MUV
ASG LYS P 22 16 C Coil -70.67 168.40 134.5 3MUV
ASG LYS P 23 17 H AlphaHelix -67.82 -44.53 108.2 3MUV
ASG ASP P 24 18 H AlphaHelix -64.40 -50.30 136.8 3MUV
ASG GLU P 25 19 H AlphaHelix -63.78 -52.65 92.3 3MUV
ASG LEU P 26 20 H AlphaHelix -50.43 -50.66 6.6 3MUV
ASG LYS P 27 21 H AlphaHelix -59.52 -53.34 66.7 3MUV
ASG LYS P 28 22 H AlphaHelix -52.73 -39.92 151.0 3MUV
ASG SER P 29 23 H AlphaHelix -71.88 -41.08 16.4 3MUV
ASG LEU P 30 24 H AlphaHelix -67.83 -45.05 0.2 3MUV
ASG HIS P 31 25 H AlphaHelix -50.10 -48.55 103.0 3MUV
ASG ALA P 32 26 H AlphaHelix -63.97 -27.47 74.4 3MUV
ASG ILE P 33 27 H AlphaHelix -84.96 -47.95 35.6 3MUV
ASG PHE P 34 28 H AlphaHelix -91.49 2.01 0.0 3MUV
ASG SER P 35 29 G 310Helix -68.41 -21.86 70.7 3MUV
ASG ARG P 36 30 G 310Helix -59.55 -13.67 159.0 3MUV
ASG PHE P 37 31 G 310Helix -115.07 -13.17 20.4 3MUV
ASG GLY P 38 32 C Coil 157.17 -168.19 24.6 3MUV
ASG GLN P 39 33 C Coil -90.05 128.33 137.9 3MUV
ASG ILE P 40 34 E Strand -93.03 124.64 24.1 3MUV
ASG LEU P 41 35 E Strand -72.48 -53.15 95.2 3MUV
ASG ASP P 42 36 E Strand -156.49 146.13 75.1 3MUV
ASG ILE P 43 37 E Strand -103.18 121.20 6.2 3MUV
ASG LEU P 44 38 E Strand -97.65 105.85 73.0 3MUV
ASG VAL P 45 39 E Strand -129.55 122.75 11.0 3MUV
ASG SER P 46 40 C Coil -131.68 149.91 43.7 3MUV
ASG ARG P 47 41 C Coil -106.88 24.80 84.6 3MUV
ASG SER P 48 42 T Turn -67.84 152.16 63.4 3MUV
ASG LEU P 49 43 T Turn -31.94 -57.13 141.4 3MUV
ASG LYS P 50 44 T Turn -78.99 -15.28 171.7 3MUV
ASG MET P 51 45 T Turn -108.02 3.85 45.1 3MUV
ASG ARG P 52 46 T Turn -61.85 154.99 108.3 3MUV
ASG GLY P 53 47 T Turn 51.60 27.25 9.1 3MUV
ASG GLN P 54 48 T Turn -147.12 153.71 28.4 3MUV
ASG ALA P 55 49 E Strand -145.12 161.46 0.0 3MUV
ASG PHE P 56 50 E Strand -126.70 126.27 52.7 3MUV
ASG VAL P 57 51 E Strand -117.12 117.21 0.0 3MUV
ASG ILE P 58 52 E Strand -100.70 119.64 1.2 3MUV
ASG PHE P 59 53 E Strand -100.72 161.15 0.9 3MUV
ASG LYS P 60 54 T Turn -61.79 -58.31 123.1 3MUV
ASG GLU P 61 55 T Turn -112.64 160.79 83.5 3MUV
ASG VAL P 62 56 H AlphaHelix -65.54 -33.69 50.2 3MUV
ASG SER P 63 57 H AlphaHelix -60.92 -38.93 65.8 3MUV
ASG SER P 64 58 H AlphaHelix -55.42 -41.15 4.0 3MUV
ASG ALA P 65 59 H AlphaHelix -67.33 -40.51 0.0 3MUV
ASG THR P 66 60 H AlphaHelix -64.03 -47.86 34.5 3MUV
ASG ASN P 67 61 H AlphaHelix -53.80 -50.39 81.9 3MUV
ASG ALA P 68 62 H AlphaHelix -57.17 -50.08 0.0 3MUV
ASG LEU P 69 63 H AlphaHelix -62.68 -36.97 27.6 3MUV
ASG ARG P 70 64 H AlphaHelix -84.22 -20.25 198.2 3MUV
ASG SER P 71 65 H AlphaHelix -103.29 -14.06 73.3 3MUV
ASG MET P 72 66 H AlphaHelix -119.02 12.29 5.4 3MUV
ASG GLN P 73 67 T Turn -72.36 119.97 94.8 3MUV
ASG GLY P 74 68 T Turn 72.39 26.12 33.9 3MUV
ASG PHE P 75 69 E Strand -75.60 118.83 82.1 3MUV
ASG PRO P 76 70 E Strand -65.15 103.94 90.6 3MUV
ASG PHE P 77 71 E Strand -122.06 113.74 9.4 3MUV
ASG TYR P 78 72 T Turn 61.09 57.83 79.0 3MUV
ASG ASP P 79 73 T Turn 64.99 2.06 159.1 3MUV
ASG LYS P 80 74 E Strand -135.44 124.00 67.0 3MUV
ASG PRO P 81 75 E Strand -64.02 119.52 67.2 3MUV
ASG MET P 82 76 E Strand -66.20 150.04 2.6 3MUV
ASG ARG P 83 77 E Strand -112.87 108.21 135.3 3MUV
ASG ILE P 84 78 E Strand -111.11 130.39 6.3 3MUV
ASG GLN P 85 79 E Strand -144.08 162.37 100.1 3MUV
ASG TYR P 86 80 E Strand -66.73 142.80 36.5 3MUV
ASG ALA P 87 81 T Turn -66.54 129.16 6.9 3MUV
ASG LYS P 88 82 T Turn -72.30 -22.21 205.8 3MUV
ASG THR P 89 83 T Turn -126.82 140.57 104.4 3MUV
ASG ASP P 90 84 T Turn -61.96 137.76 91.3 3MUV
ASG SER P 91 85 T Turn -64.66 146.76 22.1 3MUV
ASG ASP P 92 86 T Turn -54.64 -21.98 119.2 3MUV
ASG ILE P 93 87 T Turn -73.80 -41.29 90.0 3MUV
ASG ILE P 94 88 T Turn -72.15 -37.97 47.0 3MUV
ASG ALA P 95 89 T Turn -66.98 5.37 76.3 3MUV
ASG LYS P 96 90 C Coil -129.63 360.00 198.6 3MUV