Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/stride/1jko.std.txt Дата изменения: Fri May 18 14:47:12 2012 Дата индексирования: Tue Oct 2 11:50:03 2012 Кодировка:

REM -------------------------------------------------------------------- 1JKO
REM 1JKO
REM STRIDE: Knowledge-based secondary structure assignment 1JKO
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 1JKO
REM 1JKO
REM Residue accessible surface area calculation 1JKO
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 1JKO
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 1JKO
REM 1JKO
REM ------------------------ General information ----------------------- 1JKO
REM 1JKO
HDR DNA BINDING PROTEIN/DNA 12-JUL-01 1JKO 1JKO
CMP MOL_ID: 1; 1JKO
CMP MOLECULE: 5'-D(*TP*GP*TP*TP*TP*TP*TP*GP*GP*TP*AP*AP*GP*A)- 1JKO
CMP 3'; 1JKO
CMP CHAIN: A; 1JKO
CMP ENGINEERED: YES; 1JKO
CMP MOL_ID: 2; 1JKO
CMP MOLECULE: 5'-D(*AP*TP*CP*TP*TP*AP*CP*CP*AP*AP*AP*AP*AP*C)- 1JKO
CMP 3'; 1JKO
CMP CHAIN: B; 1JKO
CMP ENGINEERED: YES; 1JKO
CMP MOL_ID: 3; 1JKO
CMP MOLECULE: DNA-INVERTASE HIN; 1JKO
CMP CHAIN: C; 1JKO
CMP FRAGMENT: RESIDUES 139 TO 190; 1JKO
CMP SYNONYM: HIN RECOMBINASE; 1JKO
CMP ENGINEERED: YES 1JKO
SRC MOL_ID: 1; 1JKO
SRC SYNTHETIC: YES; 1JKO
SRC MOL_ID: 2; 1JKO
SRC SYNTHETIC: YES; 1JKO
SRC MOL_ID: 3; 1JKO
SRC SYNTHETIC: YES; 1JKO
SRC OTHER_DETAILS: SYNTHETIC PEPTIDE 1JKO
AUT T.K.CHIU,C.SOHN,R.C.JOHNSON,R.E.DICKERSON 1JKO
REM 1JKO
REM -------------------- Secondary structure summary ------------------- 1JKO
REM 1JKO
CHN /data/npidb/pdb/pdb_new/all/pdb1jko.pdb C 1JKO
REM 1JKO
REM . . . . 1JKO
SEQ 1 GRPRAINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYFPASS 46 1JKO
STR TTTT HHHHHHHHHHHH HHHHHHH HHHHHHH 1JKO
REM 1JKO
REM 1JKO
REM 1JKO
LOC AlphaHelix HIS 147 C LYS 158 C 1JKO
LOC AlphaHelix GLN 163 C PHE 169 C 1JKO
LOC AlphaHelix VAL 173 C TYR 179 C 1JKO
LOC TurnIV ARG 142 C ASN 145 C 1JKO
REM 1JKO
REM --------------- Detailed secondary structure assignment------------- 1JKO
REM 1JKO
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 1JKO
ASG GLY C 139 1 C Coil 360.00 -90.78 131.4 1JKO
ASG ARG C 140 2 C Coil -84.61 129.85 237.8 1JKO
ASG PRO C 141 3 C Coil -65.67 146.10 106.2 1JKO
ASG ARG C 142 4 T Turn -65.85 175.47 182.7 1JKO
ASG ALA C 143 5 T Turn -107.06 -21.96 61.9 1JKO
ASG ILE C 144 6 T Turn -136.54 113.17 5.8 1JKO
ASG ASN C 145 7 T Turn -75.40 162.71 115.6 1JKO
ASG LYS C 146 8 C Coil -47.48 -20.64 100.9 1JKO
ASG HIS C 147 9 H AlphaHelix -70.58 -47.68 52.5 1JKO
ASG GLU C 148 10 H AlphaHelix -71.44 -38.10 8.1 1JKO
ASG GLN C 149 11 H AlphaHelix -51.40 -16.03 26.9 1JKO
ASG GLU C 150 12 H AlphaHelix -106.11 -46.49 42.6 1JKO
ASG GLN C 151 13 H AlphaHelix -61.64 -46.82 124.9 1JKO
ASG ILE C 152 14 H AlphaHelix -66.23 -45.68 0.0 1JKO
ASG SER C 153 15 H AlphaHelix -52.87 -42.95 56.7 1JKO
ASG ARG C 154 16 H AlphaHelix -62.08 -52.87 43.1 1JKO
ASG LEU C 155 17 H AlphaHelix -48.04 -50.84 49.8 1JKO
ASG LEU C 156 18 H AlphaHelix -65.06 -31.81 29.4 1JKO
ASG GLU C 157 19 H AlphaHelix -69.33 -20.04 72.2 1JKO
ASG LYS C 158 20 H AlphaHelix -94.03 14.58 77.3 1JKO
ASG GLY C 159 21 C Coil 71.88 69.75 62.1 1JKO
ASG HIS C 160 22 C Coil -118.88 137.68 79.9 1JKO
ASG PRO C 161 23 C Coil -73.25 117.16 82.6 1JKO
ASG ARG C 162 24 C Coil -53.10 -42.76 45.9 1JKO
ASG GLN C 163 25 H AlphaHelix -56.61 -29.77 53.9 1JKO
ASG GLN C 164 26 H AlphaHelix -93.83 -37.63 17.2 1JKO
ASG LEU C 165 27 H AlphaHelix -61.34 -8.34 9.7 1JKO
ASG ALA C 166 28 H AlphaHelix -103.14 -51.72 2.6 1JKO
ASG ILE C 167 29 H AlphaHelix -43.74 -61.60 139.8 1JKO
ASG ILE C 168 30 H AlphaHelix -52.86 -63.03 139.4 1JKO
ASG PHE C 169 31 H AlphaHelix -51.21 -60.87 82.1 1JKO
ASG GLY C 170 32 C Coil 139.80 -19.12 63.4 1JKO
ASG ILE C 171 33 C Coil -82.42 160.82 22.0 1JKO
ASG GLY C 172 34 C Coil -81.58 156.78 38.6 1JKO
ASG VAL C 173 35 H AlphaHelix -58.27 -38.06 58.4 1JKO
ASG SER C 174 36 H AlphaHelix -63.80 -36.18 90.9 1JKO
ASG THR C 175 37 H AlphaHelix -60.86 -56.56 26.7 1JKO
ASG LEU C 176 38 H AlphaHelix -51.91 -50.00 0.0 1JKO
ASG TYR C 177 39 H AlphaHelix -61.91 -27.00 110.0 1JKO
ASG ARG C 178 40 H AlphaHelix -70.15 -44.48 161.7 1JKO
ASG TYR C 179 41 H AlphaHelix -75.69 -33.66 63.9 1JKO
ASG PHE C 180 42 C Coil -124.34 75.37 20.4 1JKO
ASG PRO C 181 43 C Coil -46.91 153.76 57.5 1JKO
ASG ALA C 182 44 C Coil -72.57 -3.85 85.1 1JKO
ASG SER C 183 45 C Coil -96.57 34.11 123.0 1JKO
ASG SER C 184 46 C Coil -123.24 360.00 114.7 1JKO