Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/stride/1rgo.std.txt Дата изменения: Fri May 18 23:15:26 2012 Дата индексирования: Tue Oct 2 11:56:40 2012 Кодировка:

REM -------------------------------------------------------------------- 1RGO
REM 1RGO
REM STRIDE: Knowledge-based secondary structure assignment 1RGO
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 1RGO
REM 1RGO
REM Residue accessible surface area calculation 1RGO
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 1RGO
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 1RGO
REM 1RGO
REM ------------------------ General information ----------------------- 1RGO
REM 1RGO
HDR RNA BINDING PROTEIN 12-NOV-03 1RGO 1RGO
CMP MOL_ID: 1; 1RGO
CMP MOLECULE: BUTYRATE RESPONSE FACTOR 2; 1RGO
CMP CHAIN: A; 1RGO
CMP SYNONYM: TIS11D PROTEIN, EGF-RESPONSE FACTOR 2, ERF-2; 1RGO
CMP ENGINEERED: YES; 1RGO
CMP MOL_ID: 2; 1RGO
CMP MOLECULE: RNA (5'-R(*UP*UP*AP*UP*UP*UP*AP*UP*U)-3'); 1RGO
CMP CHAIN: D; 1RGO
CMP ENGINEERED: YES 1RGO
SRC MOL_ID: 1; 1RGO
SRC ORGANISM_SCIENTIFIC: HOMO SAPIENS; 1RGO
SRC ORGANISM_COMMON: HUMAN; 1RGO
SRC ORGANISM_TAXID: 9606; 1RGO
SRC GENE: ZFP36L2, BRF2, TIS11D, ERF2; 1RGO
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); 1RGO
SRC EXPRESSION_SYSTEM_TAXID: 469008; 1RGO
SRC EXPRESSION_SYSTEM_STRAIN: BL21(DE3); 1RGO
SRC EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; 1RGO
SRC EXPRESSION_SYSTEM_PLASMID: PET21A; 1RGO
SRC MOL_ID: 2; 1RGO
SRC SYNTHETIC: YES; 1RGO
SRC OTHER_DETAILS: SYNTHETIC 1RGO
AUT B.P.HUDSON,M.A.MARTINEZ-YAMOUT,H.J.DYSON,P.E.WRIGHT 1RGO
REM 1RGO
REM -------------------- Secondary structure summary ------------------- 1RGO
REM 1RGO
CHN /data/npidb/pdb/pdb_new/all/pdb1rgo.pdb A 1RGO
REM 1RGO
REM . . . . . 1RGO
SEQ 1 STRYKTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTF 50 1RGO
STR TTTTTTTB HHHHHH TTTGGG BTTGGG TTTTTT B HH 1RGO
REM 1RGO
REM . . 1RGO
SEQ 51 HTIGFCPYGPRCHFIHNADE 70 1RGO
STR HHH TTTGGG BTTT 1RGO
REM 1RGO
REM 1RGO
REM 1RGO
LOC AlphaHelix ARG 160 A SER 165 A 1RGO
LOC AlphaHelix THR 199 A ILE 203 A 1RGO
LOC 310Helix GLY 171 A LYS 173 A 1RGO
LOC 310Helix PHE 180 A GLU 182 A 1RGO
LOC 310Helix GLY 209 A ARG 211 A 1RGO
LOC TurnI SER 151 A TYR 154 A 1RGO
LOC TurnII ARG 153 A THR 156 A 1RGO
LOC TurnVIII LYS 155 A LEU 158 A 1RGO
LOC TurnI CYS 168 A GLY 171 A 1RGO
LOC TurnVIII ALA 177 A PHE 180 A 1RGO
LOC TurnI HIS 189 A TYR 192 A 1RGO
LOC TurnIV LYS 191 A THR 194 A 1RGO
LOC TurnI CYS 206 A GLY 209 A 1RGO
LOC TurnIV ILE 215 A ALA 218 A 1RGO
REM 1RGO
REM --------------- Detailed secondary structure assignment------------- 1RGO
REM 1RGO
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 1RGO
ASG SER A 151 1 T Turn 360.00 140.57 120.9 1RGO
ASG THR A 152 2 T Turn -68.83 -17.20 105.8 1RGO
ASG ARG A 153 3 T Turn -82.08 5.89 121.3 1RGO
ASG TYR A 154 4 T Turn -57.91 122.29 80.1 1RGO
ASG LYS A 155 5 T Turn 52.83 31.75 18.0 1RGO
ASG THR A 156 6 T Turn -90.02 -7.97 25.7 1RGO
ASG GLU A 157 7 T Turn -132.88 149.10 33.6 1RGO
ASG LEU A 158 8 B Bridge -62.08 142.01 53.7 1RGO
ASG CYS A 159 9 C Coil -75.60 98.73 3.0 1RGO
ASG ARG A 160 10 H AlphaHelix -64.30 -43.17 133.2 1RGO
ASG PRO A 161 11 H AlphaHelix -60.89 -37.02 74.0 1RGO
ASG PHE A 162 12 H AlphaHelix -69.86 -42.10 63.1 1RGO
ASG GLU A 163 13 H AlphaHelix -65.80 -29.01 91.9 1RGO
ASG GLU A 164 14 H AlphaHelix -84.92 -44.28 155.5 1RGO
ASG SER A 165 15 H AlphaHelix -118.11 -5.68 96.4 1RGO
ASG GLY A 166 16 C Coil 77.23 9.51 54.4 1RGO
ASG THR A 167 17 C Coil -137.62 153.04 95.5 1RGO
ASG CYS A 168 18 T Turn -146.27 125.67 23.5 1RGO
ASG LYS A 169 19 T Turn -69.20 -13.89 204.0 1RGO
ASG TYR A 170 20 T Turn -86.71 -19.17 152.3 1RGO
ASG GLY A 171 21 G 310Helix 59.57 -138.91 30.9 1RGO
ASG GLU A 172 22 G 310Helix -69.68 -6.97 171.7 1RGO
ASG LYS A 173 23 G 310Helix -98.73 3.44 156.3 1RGO
ASG CYS A 174 24 C Coil -62.58 130.26 4.6 1RGO
ASG GLN A 175 25 C Coil -81.96 7.88 98.6 1RGO
ASG PHE A 176 26 C Coil -120.31 161.93 88.2 1RGO
ASG ALA A 177 27 B Bridge -78.53 118.34 0.0 1RGO
ASG HIS A 178 28 T Turn -81.62 -25.70 27.3 1RGO
ASG GLY A 179 29 T Turn -131.01 151.07 25.5 1RGO
ASG PHE A 180 30 G 310Helix -64.46 -20.53 136.2 1RGO
ASG HIS A 181 31 G 310Helix -63.30 -17.92 193.7 1RGO
ASG GLU A 182 32 G 310Helix -98.79 -9.99 64.0 1RGO
ASG LEU A 183 33 C Coil -63.22 125.45 66.9 1RGO
ASG ARG A 184 34 C Coil -97.94 -170.04 116.2 1RGO
ASG SER A 185 35 C Coil -105.84 133.29 109.3 1RGO
ASG LEU A 186 36 C Coil -87.28 127.62 72.5 1RGO
ASG THR A 187 37 C Coil -75.38 103.27 141.3 1RGO
ASG ARG A 188 38 C Coil -109.09 158.74 123.5 1RGO
ASG HIS A 189 39 T Turn -58.30 145.46 116.5 1RGO
ASG PRO A 190 40 T Turn -63.03 -23.93 123.9 1RGO
ASG LYS A 191 41 T Turn -93.06 19.76 101.5 1RGO
ASG TYR A 192 42 T Turn -49.96 120.48 60.0 1RGO
ASG LYS A 193 43 T Turn 51.77 57.16 78.1 1RGO
ASG THR A 194 44 T Turn -114.61 -17.11 76.8 1RGO
ASG GLU A 195 45 C Coil -121.13 154.21 115.4 1RGO
ASG LEU A 196 46 B Bridge -67.56 135.34 93.2 1RGO
ASG CYS A 197 47 C Coil -68.75 116.52 5.9 1RGO
ASG ARG A 198 48 C Coil -58.46 -50.58 201.0 1RGO
ASG THR A 199 49 H AlphaHelix -58.61 -47.91 50.2 1RGO
ASG PHE A 200 50 H AlphaHelix -67.50 -39.92 58.0 1RGO
ASG HIS A 201 51 H AlphaHelix -80.53 -0.93 100.8 1RGO
ASG THR A 202 52 H AlphaHelix -112.99 -62.89 113.6 1RGO
ASG ILE A 203 53 H AlphaHelix -78.32 -14.70 128.9 1RGO
ASG GLY A 204 54 C Coil 82.58 3.19 53.4 1RGO
ASG PHE A 205 55 C Coil -147.40 167.53 139.5 1RGO
ASG CYS A 206 56 T Turn -146.11 130.21 2.0 1RGO
ASG PRO A 207 57 T Turn -70.62 -13.97 101.6 1RGO
ASG TYR A 208 58 T Turn -84.65 -16.74 154.4 1RGO
ASG GLY A 209 59 G 310Helix 62.41 -143.89 23.3 1RGO
ASG PRO A 210 60 G 310Helix -69.54 -12.17 98.8 1RGO
ASG ARG A 211 61 G 310Helix -80.46 -3.99 145.7 1RGO
ASG CYS A 212 62 C Coil -63.52 143.09 6.4 1RGO
ASG HIS A 213 63 C Coil -93.09 10.89 69.0 1RGO
ASG PHE A 214 64 C Coil -124.41 159.91 97.4 1RGO
ASG ILE A 215 65 B Bridge -68.72 121.65 41.7 1RGO
ASG HIS A 216 66 T Turn -88.59 -94.09 31.1 1RGO
ASG ASN A 217 67 T Turn -95.60 130.73 106.6 1RGO
ASG ALA A 218 68 T Turn -74.43 -9.29 89.5 1RGO
ASG ASP A 219 69 C Coil -107.35 136.81 119.2 1RGO
ASG GLU A 220 70 C Coil -74.94 360.00 213.0 1RGO