Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/stride/1tc3.std.txt Дата изменения: Sat May 19 00:39:38 2012 Дата индексирования: Tue Oct 2 11:58:38 2012 Кодировка:

REM -------------------------------------------------------------------- 1TC3
REM 1TC3
REM STRIDE: Knowledge-based secondary structure assignment 1TC3
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 1TC3
REM 1TC3
REM Residue accessible surface area calculation 1TC3
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 1TC3
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 1TC3
REM 1TC3
REM ------------------------ General information ----------------------- 1TC3
REM 1TC3
HDR DNA BINDING PROTEIN/DNA 07-JUL-97 1TC3 1TC3
CMP MOL_ID: 1; 1TC3
CMP MOLECULE: DNA (5'- 1TC3
CMP D(*AP*GP*GP*GP*GP*GP*GP*GP*TP*CP*CP*TP*AP*TP*AP*GP*A 1TC3
CMP P*AP*CP*TP*T)-3'); 1TC3
CMP CHAIN: A; 1TC3
CMP ENGINEERED: YES; 1TC3
CMP MOL_ID: 2; 1TC3
CMP MOLECULE: DNA (5'- 1TC3
CMP D(*AP*GP*TP*TP*CP*TP*AP*TP*AP*GP*GP*AP*CP*CP*CP*CP*C 1TC3
CMP P*CP*CP*T)-3'); 1TC3
CMP CHAIN: B; 1TC3
CMP ENGINEERED: YES; 1TC3
CMP MOL_ID: 3; 1TC3
CMP MOLECULE: PROTEIN (TC3 TRANSPOSASE); 1TC3
CMP CHAIN: C; 1TC3
CMP FRAGMENT: SPECIFIC DNA BINDING DOMAIN, RESIDUES 2 - 52; 1TC3
CMP ENGINEERED: YES; 1TC3
CMP MUTATION: YES 1TC3
SRC MOL_ID: 1; 1TC3
SRC SYNTHETIC: YES; 1TC3
SRC MOL_ID: 2; 1TC3
SRC SYNTHETIC: YES; 1TC3
SRC MOL_ID: 3; 1TC3
SRC ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; 1TC3
SRC ORGANISM_TAXID: 6239; 1TC3
SRC STRAIN: BERGERAC; 1TC3
SRC VARIANT: TR679; 1TC3
SRC ORGANELLE: NUCLEUS; 1TC3
SRC GENE: TC3A; 1TC3
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 1TC3
SRC EXPRESSION_SYSTEM_TAXID: 562; 1TC3
SRC EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) PLYSS; 1TC3
SRC EXPRESSION_SYSTEM_CELLULAR_LOCATION: CYTOPLASM; 1TC3
SRC EXPRESSION_SYSTEM_VECTOR_TYPE: PET3C; 1TC3
SRC EXPRESSION_SYSTEM_PLASMID: PRP1200; 1TC3
SRC EXPRESSION_SYSTEM_GENE: TC3A N1-65 1TC3
AUT G.VAN POUDEROYEN,R.F.KETTING,A.PERRAKIS,R.H.A.PLASTERK, 1TC3
AUT T.K.SIXMA 1TC3
REM 1TC3
REM -------------------- Secondary structure summary ------------------- 1TC3
REM 1TC3
CHN /data/npidb/pdb/pdb_new/all/pdb1tc3.pdb C 1TC3
REM 1TC3
REM . . . . . 1TC3
SEQ 1 PRGSALSDTERAQLDVMKLLNVSLHEMSRKISRSRHCIRVYLKDPVSYGT 50 1TC3
STR TTTT HHHHHHHHHHHHH HHHHHHHH HHHHHHHHHTTTTTTT 1TC3
REM 1TC3
REM 1TC3
SEQ 51 S 51 1TC3
STR 1TC3
REM 1TC3
REM 1TC3
REM 1TC3
LOC AlphaHelix ASP 209 C LEU 221 C 1TC3
LOC AlphaHelix LEU 225 C ILE 232 C 1TC3
LOC AlphaHelix ARG 236 C LYS 244 C 1TC3
LOC TurnIV PRO 202 C SER 205 C 1TC3
LOC TurnIV ASP 245 C SER 248 C 1TC3
LOC TurnIV PRO 246 C TYR 249 C 1TC3
LOC TurnII SER 248 C THR 251 C 1TC3
REM 1TC3
REM --------------- Detailed secondary structure assignment------------- 1TC3
REM 1TC3
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 1TC3
ASG PRO C 202 1 T Turn 360.00 -159.31 171.0 1TC3
ASG ARG C 203 2 T Turn -71.80 -17.71 261.7 1TC3
ASG GLY C 204 3 T Turn -146.90 174.69 47.7 1TC3
ASG SER C 205 4 T Turn -68.78 153.59 85.2 1TC3
ASG ALA C 206 5 C Coil -71.89 158.78 74.1 1TC3
ASG LEU C 207 6 C Coil -72.77 127.42 9.4 1TC3
ASG SER C 208 7 C Coil -71.36 154.20 45.3 1TC3
ASG ASP C 209 8 H AlphaHelix -53.22 -34.79 115.0 1TC3
ASG THR C 210 9 H AlphaHelix -66.35 -52.75 83.7 1TC3
ASG GLU C 211 10 H AlphaHelix -54.20 -55.57 31.1 1TC3
ASG ARG C 212 11 H AlphaHelix -60.13 -21.32 70.5 1TC3
ASG ALA C 213 12 H AlphaHelix -76.33 -37.15 51.0 1TC3
ASG GLN C 214 13 H AlphaHelix -64.48 -54.64 89.5 1TC3
ASG LEU C 215 14 H AlphaHelix -46.99 -34.93 0.0 1TC3
ASG ASP C 216 15 H AlphaHelix -73.62 -34.43 61.2 1TC3
ASG VAL C 217 16 H AlphaHelix -72.48 -47.40 72.8 1TC3
ASG MET C 218 17 H AlphaHelix -54.15 -40.51 27.9 1TC3
ASG LYS C 219 18 H AlphaHelix -65.12 -39.68 112.8 1TC3
ASG LEU C 220 19 H AlphaHelix -58.82 -37.60 133.2 1TC3
ASG LEU C 221 20 H AlphaHelix -82.63 0.09 120.4 1TC3
ASG ASN C 222 21 C Coil 67.49 31.83 145.6 1TC3
ASG VAL C 223 22 C Coil -72.75 153.95 37.3 1TC3
ASG SER C 224 23 C Coil -80.48 151.10 58.2 1TC3
ASG LEU C 225 24 H AlphaHelix -46.97 -54.29 48.1 1TC3
ASG HIS C 226 25 H AlphaHelix -59.41 -40.76 107.5 1TC3
ASG GLU C 227 26 H AlphaHelix -68.75 -37.93 72.2 1TC3
ASG MET C 228 27 H AlphaHelix -54.09 -50.77 2.0 1TC3
ASG SER C 229 28 H AlphaHelix -57.90 -45.72 18.6 1TC3
ASG ARG C 230 29 H AlphaHelix -61.55 -40.60 148.8 1TC3
ASG LYS C 231 30 H AlphaHelix -57.75 -46.12 111.9 1TC3
ASG ILE C 232 31 H AlphaHelix -114.12 20.60 22.0 1TC3
ASG SER C 233 32 C Coil 50.02 48.40 104.5 1TC3
ASG ARG C 234 33 C Coil -128.81 149.33 47.2 1TC3
ASG SER C 235 34 C Coil -59.57 153.55 65.8 1TC3
ASG ARG C 236 35 H AlphaHelix -66.41 -37.38 102.3 1TC3
ASG HIS C 237 36 H AlphaHelix -50.87 -58.45 130.5 1TC3
ASG CYS C 238 37 H AlphaHelix -62.55 -52.33 28.3 1TC3
ASG ILE C 239 38 H AlphaHelix -43.80 -49.28 0.0 1TC3
ASG ARG C 240 39 H AlphaHelix -55.37 -71.64 104.2 1TC3
ASG VAL C 241 40 H AlphaHelix -38.75 -52.00 76.4 1TC3
ASG TYR C 242 41 H AlphaHelix -58.25 -48.19 8.2 1TC3
ASG LEU C 243 42 H AlphaHelix -68.69 -22.64 32.6 1TC3
ASG LYS C 244 43 H AlphaHelix -67.96 -23.54 179.5 1TC3
ASG ASP C 245 44 T Turn -172.11 89.48 67.1 1TC3
ASG PRO C 246 45 T Turn -68.74 -35.15 49.5 1TC3
ASG VAL C 247 46 T Turn -52.86 -66.46 115.4 1TC3
ASG SER C 248 47 T Turn -48.17 -18.22 61.3 1TC3
ASG TYR C 249 48 T Turn -60.36 131.86 75.7 1TC3
ASG GLY C 250 49 T Turn 88.33 -2.84 73.4 1TC3
ASG THR C 251 50 T Turn -94.98 94.13 97.9 1TC3
ASG SER C 252 51 C Coil -154.91 360.00 170.1 1TC3