Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/stride/2oeh.std.txt Дата изменения: Sat May 19 19:18:01 2012 Дата индексирования: Tue Oct 2 12:12:57 2012 Кодировка:

REM -------------------------------------------------------------------- 2OEH
REM 2OEH
REM STRIDE: Knowledge-based secondary structure assignment 2OEH
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 2OEH
REM 2OEH
REM Residue accessible surface area calculation 2OEH
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 2OEH
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 2OEH
REM 2OEH
REM ------------------------ General information ----------------------- 2OEH
REM 2OEH
HDR TRANSCRIPTION/DNA 29-DEC-06 2OEH 2OEH
CMP MOL_ID: 1; 2OEH
CMP MOLECULE: AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 5B; 2OEH
CMP CHAIN: A; 2OEH
CMP FRAGMENT: ARID DOMAIN; 2OEH
CMP SYNONYM: ARID DOMAIN- CONTAINING PROTEIN 5B, MRF1-LIKE, 2OEH
CMP MODULATOR RECOGNITION FACTOR 2, MRF-2; 2OEH
CMP ENGINEERED: YES; 2OEH
CMP MOL_ID: 2; 2OEH
CMP MOLECULE: 5'- 2OEH
CMP D(P*TP*AP*CP*AP*AP*TP*AP*TP*AP*AP*CP*GP*TP*CP*G)-3'; 2OEH
CMP CHAIN: B; 2OEH
CMP ENGINEERED: YES; 2OEH
CMP MOL_ID: 3; 2OEH
CMP MOLECULE: 5'-D(P*CP*GP*AP*CP*GP*TP*TP*AP*TP*AP*TP*TP*GP*T)- 2OEH
CMP 3'; 2OEH
CMP CHAIN: C; 2OEH
CMP ENGINEERED: YES 2OEH
SRC MOL_ID: 1; 2OEH
SRC ORGANISM_SCIENTIFIC: HOMO SAPIENS; 2OEH
SRC ORGANISM_COMMON: HUMAN; 2OEH
SRC ORGANISM_TAXID: 9606; 2OEH
SRC GENE: ARID5B, DESRT, MRF2; 2OEH
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 2OEH
SRC EXPRESSION_SYSTEM_TAXID: 562; 2OEH
SRC MOL_ID: 2; 2OEH
SRC SYNTHETIC: YES; 2OEH
SRC OTHER_DETAILS: SOLID PHASE SYNTHESIS; 2OEH
SRC MOL_ID: 3; 2OEH
SRC SYNTHETIC: YES; 2OEH
SRC OTHER_DETAILS: SOLID PHASE SYNTHESIS 2OEH
AUT S.CAI,L.ZHU,Z.ZHANG 2OEH
REM 2OEH
REM -------------------- Secondary structure summary ------------------- 2OEH
REM 2OEH
CHN /data/npidb/pdb/pdb_new/all/pdb2oeh.pdb A 2OEH
REM 2OEH
REM . . . . . 2OEH
SEQ 1 RADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYET 50 2OEH
STR HHHHHHHHHHHHHHHHH GGG TTTT HHHHHHHHHHH HHHH 2OEH
REM 2OEH
REM . . . . . 2OEH
SEQ 51 ITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPL 100 2OEH
STR HHH HHHHHHHHH TTTTTTHHHHHHHHHHTTTHHHHHHHHTTTT 2OEH
REM 2OEH
REM 2OEH
SEQ 101 PPIKPRK 107 2OEH
STR 2OEH
REM 2OEH
REM 2OEH
REM 2OEH
LOC AlphaHelix ARG 1 A GLU 17 A 2OEH
LOC AlphaHelix LEU 35 A LEU 45 A 2OEH
LOC AlphaHelix GLY 47 A ALA 53 A 2OEH
LOC AlphaHelix GLN 56 A LEU 64 A 2OEH
LOC AlphaHelix ALA 73 A GLU 82 A 2OEH
LOC AlphaHelix LEU 86 A LYS 93 A 2OEH
LOC 310Helix ILE 22 A ARG 24 A 2OEH
LOC TurnIV LEU 28 A LYS 31 A 2OEH
LOC TurnII ASN 67 A SER 70 A 2OEH
LOC TurnIV SER 70 A ALA 73 A 2OEH
LOC TurnIV GLU 82 A ILE 85 A 2OEH
LOC TurnIV ARG 83 A LEU 86 A 2OEH
LOC TurnIV LYS 93 A GLU 96 A 2OEH
LOC TurnIV GLY 94 A ASP 97 A 2OEH
REM 2OEH
REM --------------- Detailed secondary structure assignment------------- 2OEH
REM 2OEH
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 2OEH
ASG ARG A 1 1 H AlphaHelix 360.00 -62.38 160.6 2OEH
ASG ALA A 2 2 H AlphaHelix -65.12 -37.01 74.9 2OEH
ASG ASP A 3 3 H AlphaHelix -73.33 -30.94 111.6 2OEH
ASG GLU A 4 4 H AlphaHelix -68.05 -45.90 35.2 2OEH
ASG GLN A 5 5 H AlphaHelix -60.33 -46.26 82.7 2OEH
ASG ALA A 6 6 H AlphaHelix -56.65 -48.66 58.9 2OEH
ASG PHE A 7 7 H AlphaHelix -74.56 -14.61 21.5 2OEH
ASG LEU A 8 8 H AlphaHelix -93.36 -15.83 12.9 2OEH
ASG VAL A 9 9 H AlphaHelix -74.91 -38.01 94.1 2OEH
ASG ALA A 10 10 H AlphaHelix -62.75 -45.13 50.1 2OEH
ASG LEU A 11 11 H AlphaHelix -60.53 -43.58 4.0 2OEH
ASG TYR A 12 12 H AlphaHelix -53.67 -45.33 77.0 2OEH
ASG LYS A 13 13 H AlphaHelix -60.87 -55.70 156.3 2OEH
ASG TYR A 14 14 H AlphaHelix -56.56 -40.82 115.1 2OEH
ASG MET A 15 15 H AlphaHelix -75.99 -30.69 9.1 2OEH
ASG LYS A 16 16 H AlphaHelix -64.47 -37.87 103.2 2OEH
ASG GLU A 17 17 H AlphaHelix -71.62 -0.15 134.5 2OEH
ASG ARG A 18 18 C Coil -119.18 20.94 134.8 2OEH
ASG LYS A 19 19 C Coil 62.98 22.65 180.1 2OEH
ASG THR A 20 20 C Coil -136.03 55.34 52.7 2OEH
ASG PRO A 21 21 C Coil -66.51 160.14 23.5 2OEH
ASG ILE A 22 22 G 310Helix -59.94 -22.40 48.0 2OEH
ASG GLU A 23 23 G 310Helix -54.59 -12.72 134.8 2OEH
ASG ARG A 24 24 G 310Helix -112.96 12.23 172.1 2OEH
ASG ILE A 25 25 C Coil -128.80 64.31 14.3 2OEH
ASG PRO A 26 26 C Coil -62.66 -32.72 91.9 2OEH
ASG TYR A 27 27 C Coil -141.68 169.03 148.5 2OEH
ASG LEU A 28 28 T Turn -107.56 161.13 12.6 2OEH
ASG GLY A 29 29 T Turn -40.78 -53.87 34.5 2OEH
ASG PHE A 30 30 T Turn -103.55 -54.63 120.8 2OEH
ASG LYS A 31 31 T Turn -99.42 -169.77 123.4 2OEH
ASG GLN A 32 32 C Coil -61.70 173.19 106.4 2OEH
ASG ILE A 33 33 C Coil -51.29 -52.44 24.9 2OEH
ASG ASN A 34 34 C Coil 32.45 69.90 63.0 2OEH
ASG LEU A 35 35 H AlphaHelix -56.61 -52.04 11.1 2OEH
ASG TRP A 36 36 H AlphaHelix -51.50 -32.48 59.2 2OEH
ASG THR A 37 37 H AlphaHelix -75.93 -49.48 44.2 2OEH
ASG MET A 38 38 H AlphaHelix -63.21 -29.83 0.2 2OEH
ASG PHE A 39 39 H AlphaHelix -64.03 -60.29 25.5 2OEH
ASG GLN A 40 40 H AlphaHelix -62.80 -28.18 94.8 2OEH
ASG ALA A 41 41 H AlphaHelix -63.12 -52.52 0.8 2OEH
ASG ALA A 42 42 H AlphaHelix -57.11 -38.24 0.0 2OEH
ASG GLN A 43 43 H AlphaHelix -69.55 -24.28 58.2 2OEH
ASG LYS A 44 44 H AlphaHelix -79.24 -46.04 139.3 2OEH
ASG LEU A 45 45 H AlphaHelix -72.91 12.95 40.5 2OEH
ASG GLY A 46 46 C Coil 103.58 24.72 20.3 2OEH
ASG GLY A 47 47 H AlphaHelix 60.61 173.57 0.0 2OEH
ASG TYR A 48 48 H AlphaHelix -52.95 -21.78 27.5 2OEH
ASG GLU A 49 49 H AlphaHelix -77.29 -47.35 51.0 2OEH
ASG THR A 50 50 H AlphaHelix -64.32 -36.86 25.3 2OEH
ASG ILE A 51 51 H AlphaHelix -56.07 -45.37 0.7 2OEH
ASG THR A 52 52 H AlphaHelix -73.47 -36.17 51.6 2OEH
ASG ALA A 53 53 H AlphaHelix -69.23 -22.58 28.0 2OEH
ASG ARG A 54 54 C Coil -132.21 -6.81 79.4 2OEH
ASG ARG A 55 55 C Coil 51.84 55.64 138.8 2OEH
ASG GLN A 56 56 H AlphaHelix -83.19 1.00 24.5 2OEH
ASG TRP A 57 57 H AlphaHelix -54.16 -30.98 5.4 2OEH
ASG LYS A 58 58 H AlphaHelix -59.03 -32.25 88.5 2OEH
ASG HIS A 59 59 H AlphaHelix -77.89 -34.07 90.6 2OEH
ASG ILE A 60 60 H AlphaHelix -60.97 -43.43 0.0 2OEH
ASG TYR A 61 61 H AlphaHelix -53.08 -31.44 48.1 2OEH
ASG ASP A 62 62 H AlphaHelix -66.99 -50.74 134.6 2OEH
ASG GLU A 63 63 H AlphaHelix -62.84 -35.46 94.1 2OEH
ASG LEU A 64 64 H AlphaHelix -63.66 -50.61 44.9 2OEH
ASG GLY A 65 65 C Coil 149.27 -170.97 32.8 2OEH
ASG GLY A 66 66 C Coil -100.41 142.38 63.2 2OEH
ASG ASN A 67 67 T Turn -143.54 95.08 35.8 2OEH
ASG PRO A 68 68 T Turn -47.48 125.26 130.6 2OEH
ASG GLY A 69 69 T Turn 97.82 4.86 86.5 2OEH
ASG SER A 70 70 T Turn -106.19 146.27 50.5 2OEH
ASG THR A 71 71 T Turn -138.41 0.83 114.0 2OEH
ASG SER A 72 72 T Turn -154.77 29.31 57.3 2OEH
ASG ALA A 73 73 H AlphaHelix -60.95 -50.78 11.8 2OEH
ASG ALA A 74 74 H AlphaHelix -80.86 -13.97 0.2 2OEH
ASG THR A 75 75 H AlphaHelix -65.98 -33.01 46.6 2OEH
ASG CYS A 76 76 H AlphaHelix -70.96 -28.47 66.0 2OEH
ASG THR A 77 77 H AlphaHelix -65.26 -27.40 0.4 2OEH
ASG ARG A 78 78 H AlphaHelix -55.45 -41.61 66.3 2OEH
ASG ARG A 79 79 H AlphaHelix -73.81 -25.67 189.5 2OEH
ASG HIS A 80 80 H AlphaHelix -76.09 -50.34 65.2 2OEH
ASG TYR A 81 81 H AlphaHelix -56.04 -37.76 0.0 2OEH
ASG GLU A 82 82 H AlphaHelix -70.81 -5.97 55.1 2OEH
ASG ARG A 83 83 T Turn -124.91 -7.14 143.0 2OEH
ASG LEU A 84 84 T Turn -115.93 -10.31 0.2 2OEH
ASG ILE A 85 85 T Turn -157.95 -21.77 0.0 2OEH
ASG LEU A 86 86 H AlphaHelix -48.64 -40.69 56.7 2OEH
ASG PRO A 87 87 H AlphaHelix -73.82 -15.89 61.5 2OEH
ASG TYR A 88 88 H AlphaHelix -107.61 -29.17 50.9 2OEH
ASG GLU A 89 89 H AlphaHelix -57.71 -14.99 5.2 2OEH
ASG ARG A 90 90 H AlphaHelix -51.76 -34.22 203.6 2OEH
ASG PHE A 91 91 H AlphaHelix -75.27 -28.62 68.5 2OEH
ASG ILE A 92 92 H AlphaHelix -74.67 -41.28 31.9 2OEH
ASG LYS A 93 93 H AlphaHelix -93.05 -3.78 52.5 2OEH
ASG GLY A 94 94 T Turn -120.21 -18.04 60.3 2OEH
ASG GLU A 95 95 T Turn -142.13 22.83 174.6 2OEH
ASG GLU A 96 96 T Turn -151.83 -49.49 159.3 2OEH
ASG ASP A 97 97 T Turn -177.49 145.32 104.2 2OEH
ASG LYS A 98 98 C Coil -117.88 87.38 142.1 2OEH
ASG PRO A 99 99 C Coil -86.77 0.22 78.2 2OEH
ASG LEU A 100 100 C Coil -117.09 99.51 12.6 2OEH
ASG PRO A 101 101 C Coil -80.13 157.60 69.5 2OEH
ASG PRO A 102 102 C Coil -72.01 -4.62 122.3 2OEH
ASG ILE A 103 103 C Coil -84.74 105.45 127.3 2OEH
ASG LYS A 104 104 C Coil -168.12 82.50 63.8 2OEH
ASG PRO A 105 105 C Coil -75.44 -60.41 107.4 2OEH
ASG ARG A 106 106 C Coil -162.92 -119.24 173.7 2OEH
ASG LYS A 107 107 C Coil -74.22 360.00 220.1 2OEH