Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/stride/2rra.std.txt Дата изменения: Sun May 20 00:50:01 2012 Дата индексирования: Tue Oct 2 12:15:48 2012 Кодировка:

REM -------------------------------------------------------------------- 2RRA
REM 2RRA
REM STRIDE: Knowledge-based secondary structure assignment 2RRA
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 2RRA
REM 2RRA
REM Residue accessible surface area calculation 2RRA
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 2RRA
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 2RRA
REM 2RRA
REM ------------------------ General information ----------------------- 2RRA
REM 2RRA
HDR RNA BINDING PROTEIN/RNA 17-JUN-10 2RRA 2RRA
CMP MOL_ID: 1; 2RRA
CMP MOLECULE: CDNA FLJ40872 FIS, CLONE TUTER2000283, HIGHLY SIMI 2RRA
CMP HOMO SAPIENS TRANSFORMER-2-BETA (SFRS10) GENE; 2RRA
CMP CHAIN: A; 2RRA
CMP FRAGMENT: RNA RECOGNITION MOTIF; 2RRA
CMP ENGINEERED: YES; 2RRA
CMP MOL_ID: 2; 2RRA
CMP MOLECULE: 5'-R(*GP*AP*AP*GP*AP*A)-3'; 2RRA
CMP CHAIN: B; 2RRA
CMP ENGINEERED: YES 2RRA
SRC MOL_ID: 1; 2RRA
SRC ORGANISM_SCIENTIFIC: HOMO SAPIENS; 2RRA
SRC ORGANISM_COMMON: HUMAN; 2RRA
SRC ORGANISM_TAXID: 9606; 2RRA
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 2RRA
SRC EXPRESSION_SYSTEM_TAXID: 562; 2RRA
SRC EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; 2RRA
SRC EXPRESSION_SYSTEM_VECTOR: P040517-05; 2RRA
SRC MOL_ID: 2; 2RRA
SRC SYNTHETIC: YES 2RRA
AUT K.TSUDA,K.KUWASAKO,M.TAKAHASHI,T.SOMEYA,M.INOUE,T.KIGAWA,T.TE 2RRA
AUT M.SHIROUZU,S.SUGANO,Y.MUTO,S.YOKOYAMA 2RRA
REM 2RRA
REM -------------------- Secondary structure summary ------------------- 2RRA
REM 2RRA
CHN /data/npidb/pdb/pdb_new/all/pdb2rra.pdb A 2RRA
REM 2RRA
REM . . . . . 2RRA
SEQ 1 GSSGSSGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYD 50 2RRA
STR TTTTTTTTT TTEEEEE TTTT HHHHHHHHGGG EEEEEEEET 2RRA
REM 2RRA
REM . . . . 2RRA
SEQ 51 QQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHT 99 2RRA
STR TTTT EEEEEEEEE HHHHHHHHHHHTTEEETTEEEEEEETTTT 2RRA
REM 2RRA
REM 2RRA
REM 2RRA
LOC AlphaHelix GLU 131 A PHE 138 A 2RRA
LOC AlphaHelix VAL 169 A ALA 179 A 2RRA
LOC 310Helix SER 139 A TYR 141 A 2RRA
LOC Strand CYS 119 A PHE 123 A 2RRA
LOC Strand ILE 144 A TYR 151 A 2RRA
LOC Strand SER 158 A PHE 166 A 2RRA
LOC Strand MET 182 A LEU 184 A 2RRA
LOC Strand ARG 187 A PHE 193 A 2RRA
LOC TurnII GLY 106 A GLY 109 A 2RRA
LOC TurnIV SER 107 A ASN 110 A 2RRA
LOC TurnIV ASN 110 A ASN 113 A 2RRA
LOC TurnIV ARG 111 A PRO 114 A 2RRA
LOC TurnVIII ASN 117 A LEU 120 A 2RRA
LOC TurnI SER 126 A THR 129 A 2RRA
LOC TurnI ASP 152 A SER 155 A 2RRA
LOC TurnIV GLN 153 A ARG 156 A 2RRA
LOC TurnII ALA 179 A MET 182 A 2RRA
LOC TurnIV GLU 183 A GLY 186 A 2RRA
LOC TurnI' LEU 184 A ARG 187 A 2RRA
LOC TurnIV SER 194 A LYS 197 A 2RRA
REM 2RRA
REM --------------- Detailed secondary structure assignment------------- 2RRA
REM 2RRA
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 2RRA
ASG GLY A 103 1 C Coil 360.00 -176.75 130.5 2RRA
ASG SER A 104 2 C Coil -66.70 140.54 133.1 2RRA
ASG SER A 105 3 C Coil -164.42 143.77 100.1 2RRA
ASG GLY A 106 4 T Turn -166.28 146.19 32.4 2RRA
ASG SER A 107 5 T Turn -58.76 125.47 125.7 2RRA
ASG SER A 108 6 T Turn 68.03 -7.89 76.1 2RRA
ASG GLY A 109 7 T Turn -87.46 -34.63 57.5 2RRA
ASG ASN A 110 8 T Turn -67.07 138.31 50.1 2RRA
ASG ARG A 111 9 T Turn -127.80 17.21 211.0 2RRA
ASG ALA A 112 10 T Turn -121.65 36.41 99.6 2RRA
ASG ASN A 113 11 T Turn -176.99 60.52 99.0 2RRA
ASG PRO A 114 12 T Turn -76.90 176.33 44.2 2RRA
ASG ASP A 115 13 C Coil -150.16 151.93 101.3 2RRA
ASG PRO A 116 14 C Coil -45.87 134.93 72.0 2RRA
ASG ASN A 117 15 T Turn -158.41 141.56 37.0 2RRA
ASG CYS A 118 16 T Turn -55.78 -31.74 43.9 2RRA
ASG CYS A 119 17 E Strand -85.04 131.33 12.8 2RRA
ASG LEU A 120 18 E Strand -118.28 144.31 0.0 2RRA
ASG GLY A 121 19 E Strand -99.38 145.82 1.0 2RRA
ASG VAL A 122 20 E Strand -132.45 128.75 0.0 2RRA
ASG PHE A 123 21 E Strand -133.84 145.14 65.6 2RRA
ASG GLY A 124 22 C Coil 101.72 9.13 20.7 2RRA
ASG LEU A 125 23 C Coil -66.03 150.36 6.3 2RRA
ASG SER A 126 24 T Turn -75.48 146.10 18.7 2RRA
ASG LEU A 127 25 T Turn -64.50 -15.00 106.5 2RRA
ASG TYR A 128 26 T Turn -95.77 -0.15 194.5 2RRA
ASG THR A 129 27 T Turn -71.65 139.41 12.0 2RRA
ASG THR A 130 28 C Coil -110.89 163.42 44.7 2RRA
ASG GLU A 131 29 H AlphaHelix -59.77 -28.21 61.6 2RRA
ASG ARG A 132 30 H AlphaHelix -70.13 -39.00 200.3 2RRA
ASG ASP A 133 31 H AlphaHelix -66.12 -47.38 59.3 2RRA
ASG LEU A 134 32 H AlphaHelix -57.34 -46.54 0.0 2RRA
ASG ARG A 135 33 H AlphaHelix -63.44 -39.02 117.4 2RRA
ASG GLU A 136 34 H AlphaHelix -68.40 -29.89 140.1 2RRA
ASG VAL A 137 35 H AlphaHelix -81.34 -30.24 19.7 2RRA
ASG PHE A 138 36 H AlphaHelix -100.37 -26.25 0.0 2RRA
ASG SER A 139 37 G 310Helix -71.06 -14.01 47.5 2RRA
ASG LYS A 140 38 G 310Helix -67.32 -13.49 142.6 2RRA
ASG TYR A 141 39 G 310Helix -96.98 -9.12 36.5 2RRA
ASG GLY A 142 40 C Coil 148.26 -175.78 16.7 2RRA
ASG PRO A 143 41 C Coil -75.41 136.01 57.9 2RRA
ASG ILE A 144 42 E Strand -128.79 122.73 2.5 2RRA
ASG ALA A 145 43 E Strand -82.61 -31.32 72.2 2RRA
ASG ASP A 146 44 E Strand -164.26 162.23 86.7 2RRA
ASG VAL A 147 45 E Strand -148.00 137.06 11.3 2RRA
ASG SER A 148 46 E Strand -144.09 120.03 22.3 2RRA
ASG ILE A 149 47 E Strand -85.87 146.58 5.3 2RRA
ASG VAL A 150 48 E Strand -97.47 129.06 27.0 2RRA
ASG TYR A 151 49 E Strand -122.14 154.73 102.9 2RRA
ASG ASP A 152 50 T Turn -71.90 140.24 58.2 2RRA
ASG GLN A 153 51 T Turn -77.23 -22.16 193.1 2RRA
ASG GLN A 154 52 T Turn -104.19 -27.75 181.3 2RRA
ASG SER A 155 53 T Turn -120.93 -12.59 45.1 2RRA
ASG ARG A 156 54 T Turn 61.82 15.54 199.5 2RRA
ASG ARG A 157 55 C Coil -74.64 153.06 160.7 2RRA
ASG SER A 158 56 E Strand -61.34 142.89 14.7 2RRA
ASG ARG A 159 57 E Strand -84.64 -1.39 154.3 2RRA
ASG GLY A 160 58 E Strand 92.92 7.72 17.1 2RRA
ASG PHE A 161 59 E Strand -144.59 160.94 53.3 2RRA
ASG ALA A 162 60 E Strand -159.86 172.27 0.0 2RRA
ASG PHE A 163 61 E Strand -141.28 149.02 43.1 2RRA
ASG VAL A 164 62 E Strand -132.63 120.80 0.0 2RRA
ASG TYR A 165 63 E Strand -106.68 98.34 24.5 2RRA
ASG PHE A 166 64 E Strand -74.66 160.97 10.1 2RRA
ASG GLU A 167 65 C Coil -90.26 6.68 139.5 2RRA
ASG ASN A 168 66 C Coil -158.56 135.22 63.3 2RRA
ASG VAL A 169 67 H AlphaHelix -68.38 -29.63 54.2 2RRA
ASG ASP A 170 68 H AlphaHelix -78.63 -26.05 91.7 2RRA
ASG ASP A 171 69 H AlphaHelix -78.71 -29.36 44.5 2RRA
ASG ALA A 172 70 H AlphaHelix -69.38 -39.65 0.0 2RRA
ASG LYS A 173 71 H AlphaHelix -61.06 -34.02 82.5 2RRA
ASG GLU A 174 72 H AlphaHelix -66.03 -63.12 80.6 2RRA
ASG ALA A 175 73 H AlphaHelix -56.62 -37.21 0.0 2RRA
ASG LYS A 176 74 H AlphaHelix -61.11 -34.37 32.1 2RRA
ASG GLU A 177 75 H AlphaHelix -87.81 -24.25 129.2 2RRA
ASG ARG A 178 76 H AlphaHelix -77.43 -46.48 151.6 2RRA
ASG ALA A 179 77 H AlphaHelix -95.91 -11.12 0.0 2RRA
ASG ASN A 180 78 T Turn -66.68 111.06 74.2 2RRA
ASG GLY A 181 79 T Turn 90.04 7.06 51.0 2RRA
ASG MET A 182 80 E Strand -74.72 168.96 47.2 2RRA
ASG GLU A 183 81 E Strand -111.12 137.09 119.6 2RRA
ASG LEU A 184 82 E Strand -143.06 116.80 23.3 2RRA
ASG ASP A 185 83 T Turn 58.14 25.11 104.4 2RRA
ASG GLY A 186 84 T Turn 91.99 2.76 47.4 2RRA
ASG ARG A 187 85 E Strand -110.19 139.27 135.1 2RRA
ASG ARG A 188 86 E Strand -72.40 138.76 142.0 2RRA
ASG ILE A 189 87 E Strand -111.82 149.30 0.2 2RRA
ASG ARG A 190 88 E Strand -117.61 153.07 172.5 2RRA
ASG VAL A 191 89 E Strand -143.67 136.05 0.0 2RRA
ASG ASP A 192 90 E Strand -150.38 162.04 54.6 2RRA
ASG PHE A 193 91 E Strand -69.77 142.50 25.7 2RRA
ASG SER A 194 92 T Turn -66.54 125.93 7.3 2RRA
ASG ILE A 195 93 T Turn -83.19 -19.87 48.8 2RRA
ASG THR A 196 94 T Turn -156.48 155.97 97.2 2RRA
ASG LYS A 197 95 T Turn -158.49 158.92 113.2 2RRA
ASG ARG A 198 96 C Coil -70.65 -40.46 169.0 2RRA
ASG PRO A 199 97 C Coil -58.59 150.17 58.8 2RRA
ASG HIS A 200 98 C Coil -160.99 146.76 167.7 2RRA
ASG THR A 201 99 C Coil -145.92 360.00 196.1 2RRA