Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/stride/2rs2.std.txt Дата изменения: Sun May 20 00:50:31 2012 Дата индексирования: Tue Oct 2 12:15:49 2012 Кодировка:

REM -------------------------------------------------------------------- 2RS2
REM 2RS2
REM STRIDE: Knowledge-based secondary structure assignment 2RS2
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 2RS2
REM 2RS2
REM Residue accessible surface area calculation 2RS2
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 2RS2
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 2RS2
REM 2RS2
REM ------------------------ General information ----------------------- 2RS2
REM 2RS2
HDR RNA BINDING PROTEIN/RNA 27-JUN-11 2RS2 2RS2
CMP MOL_ID: 1; 2RS2
CMP MOLECULE: RNA-BINDING PROTEIN MUSASHI HOMOLOG 1; 2RS2
CMP CHAIN: A; 2RS2
CMP FRAGMENT: RRM 1 DOMAIN, UNP RESIDUES 20-103; 2RS2
CMP SYNONYM: MUSASHI-1; 2RS2
CMP ENGINEERED: YES; 2RS2
CMP MOL_ID: 2; 2RS2
CMP MOLECULE: RNA (5'-R(*GP*UP*AP*GP*U)-3'); 2RS2
CMP CHAIN: B; 2RS2
CMP ENGINEERED: YES 2RS2
SRC MOL_ID: 1; 2RS2
SRC ORGANISM_SCIENTIFIC: MUS MUSCULUS; 2RS2
SRC ORGANISM_COMMON: MOUSE; 2RS2
SRC ORGANISM_TAXID: 10090; 2RS2
SRC GENE: MSI1, MSI1H; 2RS2
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 2RS2
SRC EXPRESSION_SYSTEM_TAXID: 562; 2RS2
SRC EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; 2RS2
SRC EXPRESSION_SYSTEM_VECTOR: PET15B; 2RS2
SRC MOL_ID: 2; 2RS2
SRC SYNTHETIC: YES; 2RS2
SRC OTHER_DETAILS: SYNTHETIC RNA 2RS2
AUT T.OHYAMA,T.NAGATA,K.TSUDA,T.IMAI,H.OKANO,T.YAMAZAKI,M.KATAHIR 2RS2
REM 2RS2
REM -------------------- Secondary structure summary ------------------- 2RS2
REM 2RS2
CHN /data/npidb/pdb/pdb_new/all/pdb2rs2.pdb A 2RS2
REM 2RS2
REM . . . . . 2RS2
SEQ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFM 50 2RS2
STR EEEE TTTT HHHHHHHHHTTT EEEEEE TTTTT TTTTEEEEET 2RS2
REM 2RS2
REM . . . 2RS2
SEQ 51 DQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPK 84 2RS2
STR THHHHHHHHH EEETTEEEEEEE 2RS2
REM 2RS2
REM 2RS2
REM 2RS2
LOC AlphaHelix GLN 33 A GLY 41 A 2RS2
LOC AlphaHelix GLN 71 A ALA 79 A 2RS2
LOC Strand MET 22 A GLY 25 A 2RS2
LOC Strand VAL 46 A VAL 51 A 2RS2
LOC Strand GLY 64 A PHE 68 A 2RS2
LOC Strand HIS 83 A LEU 85 A 2RS2
LOC Strand LYS 88 A VAL 94 A 2RS2
LOC TurnI SER 28 A THR 31 A 2RS2
LOC TurnI GLY 41 A GLY 44 A 2RS2
LOC TurnIV ASP 54 A THR 57 A 2RS2
LOC TurnI PRO 55 A LYS 58 A 2RS2
LOC TurnI' SER 60 A PHE 63 A 2RS2
LOC TurnIV PHE 68 A GLN 71 A 2RS2
LOC TurnIV GLU 84 A SER 87 A 2RS2
LOC TurnI' LEU 85 A LYS 88 A 2RS2
REM 2RS2
REM --------------- Detailed secondary structure assignment------------- 2RS2
REM 2RS2
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 2RS2
ASG CYS A 20 1 C Coil 360.00 -165.36 85.7 2RS2
ASG LYS A 21 2 C Coil 85.82 135.41 67.4 2RS2
ASG MET A 22 3 E Strand -143.05 137.55 0.6 2RS2
ASG PHE A 23 4 E Strand -80.05 140.17 53.9 2RS2
ASG ILE A 24 5 E Strand -124.02 101.14 0.6 2RS2
ASG GLY A 25 6 E Strand -92.35 172.49 5.9 2RS2
ASG GLY A 26 7 C Coil 70.87 17.96 37.0 2RS2
ASG LEU A 27 8 C Coil -66.45 167.00 8.7 2RS2
ASG SER A 28 9 T Turn -82.85 153.51 14.7 2RS2
ASG TRP A 29 10 T Turn -62.71 -12.94 171.5 2RS2
ASG GLN A 30 11 T Turn -95.12 -7.49 148.1 2RS2
ASG THR A 31 12 T Turn -71.40 138.13 12.0 2RS2
ASG THR A 32 13 C Coil -119.31 164.32 72.7 2RS2
ASG GLN A 33 14 H AlphaHelix -68.30 -23.95 49.1 2RS2
ASG GLU A 34 15 H AlphaHelix -71.22 -35.55 158.7 2RS2
ASG GLY A 35 16 H AlphaHelix -67.71 -34.39 15.0 2RS2
ASG LEU A 36 17 H AlphaHelix -61.35 -51.06 0.0 2RS2
ASG ARG A 37 18 H AlphaHelix -56.44 -38.29 120.6 2RS2
ASG GLU A 38 19 H AlphaHelix -60.91 -35.16 167.2 2RS2
ASG TYR A 39 20 H AlphaHelix -87.19 -39.45 33.2 2RS2
ASG PHE A 40 21 H AlphaHelix -83.32 -15.36 0.2 2RS2
ASG GLY A 41 22 H AlphaHelix -63.92 -10.90 46.7 2RS2
ASG GLN A 42 23 T Turn -73.04 -25.35 132.6 2RS2
ASG PHE A 43 24 T Turn -102.39 -24.11 18.5 2RS2
ASG GLY A 44 25 T Turn 168.36 167.78 25.8 2RS2
ASG GLU A 45 26 C Coil -68.26 127.47 128.8 2RS2
ASG VAL A 46 27 E Strand -85.24 133.65 3.7 2RS2
ASG LYS A 47 28 E Strand -83.44 -24.64 139.6 2RS2
ASG GLU A 48 29 E Strand -164.13 148.43 82.9 2RS2
ASG CYS A 49 30 E Strand -145.75 145.50 25.2 2RS2
ASG LEU A 50 31 E Strand -148.28 147.31 53.3 2RS2
ASG VAL A 51 32 E Strand -132.53 126.17 3.9 2RS2
ASG MET A 52 33 C Coil -85.98 52.85 72.5 2RS2
ASG ARG A 53 34 C Coil -73.06 148.71 128.9 2RS2
ASG ASP A 54 35 T Turn -74.68 129.65 63.6 2RS2
ASG PRO A 55 36 T Turn -80.90 -10.91 100.0 2RS2
ASG LEU A 56 37 T Turn -91.51 -45.28 144.2 2RS2
ASG THR A 57 38 T Turn -102.57 -11.65 84.0 2RS2
ASG LYS A 58 39 T Turn 65.73 3.31 140.7 2RS2
ASG ARG A 59 40 C Coil -56.78 129.01 122.7 2RS2
ASG SER A 60 41 T Turn -72.03 -6.32 1.2 2RS2
ASG ARG A 61 42 T Turn 61.33 4.79 178.5 2RS2
ASG GLY A 62 43 T Turn 74.16 19.13 13.3 2RS2
ASG PHE A 63 44 T Turn -156.79 160.86 30.7 2RS2
ASG GLY A 64 45 E Strand -158.71 -157.04 0.0 2RS2
ASG PHE A 65 46 E Strand -146.06 150.54 49.9 2RS2
ASG VAL A 66 47 E Strand -143.34 139.90 0.6 2RS2
ASG THR A 67 48 E Strand -119.76 139.70 12.4 2RS2
ASG PHE A 68 49 E Strand -101.06 153.57 2.3 2RS2
ASG MET A 69 50 T Turn -65.63 -13.77 108.4 2RS2
ASG ASP A 70 51 T Turn -154.53 154.26 107.4 2RS2
ASG GLN A 71 52 H AlphaHelix -59.60 -25.99 96.6 2RS2
ASG ALA A 72 53 H AlphaHelix -58.56 -23.82 51.4 2RS2
ASG GLY A 73 54 H AlphaHelix -81.58 -33.04 4.2 2RS2
ASG VAL A 74 55 H AlphaHelix -64.14 -47.39 1.2 2RS2
ASG ASP A 75 56 H AlphaHelix -51.66 -45.52 104.9 2RS2
ASG LYS A 76 57 H AlphaHelix -65.49 -39.07 104.5 2RS2
ASG VAL A 77 58 H AlphaHelix -69.99 -29.39 2.9 2RS2
ASG LEU A 78 59 H AlphaHelix -78.77 -38.57 84.3 2RS2
ASG ALA A 79 60 H AlphaHelix -70.20 -25.10 82.0 2RS2
ASG GLN A 80 61 C Coil -83.06 139.99 91.5 2RS2
ASG SER A 81 62 C Coil -83.67 -14.62 131.6 2RS2
ASG ARG A 82 63 C Coil -159.02 148.08 124.6 2RS2
ASG HIS A 83 64 E Strand -138.35 154.28 6.9 2RS2
ASG GLU A 84 65 E Strand -153.91 132.44 82.6 2RS2
ASG LEU A 85 66 E Strand -148.68 127.44 30.8 2RS2
ASG ASP A 86 67 T Turn 57.92 38.00 72.4 2RS2
ASG SER A 87 68 T Turn 66.97 17.16 107.8 2RS2
ASG LYS A 88 69 E Strand -117.14 131.66 124.3 2RS2
ASG THR A 89 70 E Strand -67.69 117.08 79.7 2RS2
ASG ILE A 90 71 E Strand -98.06 157.38 7.6 2RS2
ASG ASP A 91 72 E Strand -129.14 78.84 88.6 2RS2
ASG PRO A 92 73 E Strand -87.83 142.55 16.5 2RS2
ASG LYS A 93 74 E Strand -158.27 164.22 82.2 2RS2
ASG VAL A 94 75 E Strand -62.55 134.21 84.7 2RS2
ASG ALA A 95 76 C Coil -79.34 135.29 18.5 2RS2
ASG PHE A 96 77 C Coil -61.68 136.26 187.4 2RS2
ASG PRO A 97 78 C Coil -69.44 139.10 122.0 2RS2
ASG ARG A 98 79 C Coil -148.41 167.26 197.8 2RS2
ASG ARG A 99 80 C Coil -118.74 117.64 187.0 2RS2
ASG ALA A 100 81 C Coil -65.28 144.22 90.5 2RS2
ASG GLN A 101 82 C Coil -109.77 134.90 156.4 2RS2
ASG PRO A 102 83 C Coil -77.21 150.33 116.6 2RS2
ASG LYS A 103 84 C Coil -160.68 360.00 270.1 2RS2