Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/stride/4tzv.std.txt Дата изменения: Mon Sep 22 16:16:27 2014 Дата индексирования: Sun Apr 10 18:32:13 2016 Кодировка:

REM -------------------------------------------------------------------- 4TZV
REM 4TZV
REM STRIDE: Knowledge-based secondary structure assignment 4TZV
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 4TZV
REM 4TZV
REM Residue accessible surface area calculation 4TZV
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 4TZV
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 4TZV
REM 4TZV
REM ------------------------ General information ----------------------- 4TZV
REM 4TZV
HDR RIBOSOMAL PROTEIN/RNA 11-JUL-14 4TZV 4TZV
CMP MOL_ID: 1; 4TZV
CMP MOLECULE: RIBOSOME-ASSOCIATED PROTEIN L7AE-LIKE; 4TZV
CMP CHAIN: A; 4TZV
CMP ENGINEERED: YES; 4TZV
CMP MOL_ID: 2; 4TZV
CMP MOLECULE: ENGINEERED TRNA; 4TZV
CMP CHAIN: B; 4TZV
CMP ENGINEERED: YES; 4TZV
CMP MOL_ID: 3; 4TZV
CMP MOLECULE: T-BOX STEM I; 4TZV
CMP CHAIN: C; 4TZV
CMP ENGINEERED: YES 4TZV
SRC MOL_ID: 1; 4TZV
SRC ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; 4TZV
SRC ORGANISM_TAXID: 1423; 4TZV
SRC GENE: RPLGB, YBAB, YBXF, BSU01090; 4TZV
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 4TZV
SRC EXPRESSION_SYSTEM_TAXID: 511693; 4TZV
SRC EXPRESSION_SYSTEM_STRAIN: BL21; 4TZV
SRC EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; 4TZV
SRC MOL_ID: 2; 4TZV
SRC SYNTHETIC: YES; 4TZV
SRC ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; 4TZV
SRC ORGANISM_TAXID: 1423; 4TZV
SRC MOL_ID: 3; 4TZV
SRC SYNTHETIC: YES; 4TZV
SRC ORGANISM_SCIENTIFIC: OCEANOBACILLUS IHEYENSIS HTE831; 4TZV
SRC ORGANISM_TAXID: 221109 4TZV
AUT J.ZHANG,A.R.FERRE-D'AMARE 4TZV
REM 4TZV
REM -------------------- Secondary structure summary ------------------- 4TZV
REM 4TZV
CHN /data/npidb/pdb/pdb_new/all/pdb4tzv.pdb A 4TZV
REM 4TZV
REM . . . . . 4TZV
SEQ 1 SYDKVSQAKSIIIGTKQTVKALKRGSVKEVVVAKDADPILTSSVVSLAED 50 4TZV
STR HHHHH EEE HHHHHHHHH EEEETTTT HHHHHHHHHHHHH 4TZV
REM 4TZV
REM . . 4TZV
SEQ 51 QGISVSVESKKLGKACGIEVGAAAVAIIL 79 4TZV
STR H EE HHHHHHH TTTTTTEEEE 4TZV
REM 4TZV
REM 4TZV
REM 4TZV
LOC AlphaHelix TYR 3 A SER 7 A 4TZV
LOC AlphaHelix THR 16 A LYS 24 A 4TZV
LOC AlphaHelix PRO 39 A GLN 52 A 4TZV
LOC AlphaHelix LYS 63 A CYS 69 A 4TZV
LOC Strand ILE 12 A ILE 14 A 4TZV
LOC Strand GLU 30 A VAL 33 A 4TZV
LOC Strand VAL 56 A SER 57 A 4TZV
LOC Strand ALA 77 A ILE 80 A 4TZV
LOC TurnI ALA 34 A ALA 37 A 4TZV
LOC TurnIV ILE 71 A GLY 74 A 4TZV
LOC TurnVIII ALA 75 A VAL 78 A 4TZV
REM 4TZV
REM --------------- Detailed secondary structure assignment------------- 4TZV
REM 4TZV
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 4TZV
ASG SER A 2 1 C Coil 360.00 116.48 78.5 4TZV
ASG TYR A 3 2 H AlphaHelix -68.82 -24.18 72.8 4TZV
ASG ASP A 4 3 H AlphaHelix -67.31 -46.98 63.3 4TZV
ASG LYS A 5 4 H AlphaHelix -65.17 -26.78 47.5 4TZV
ASG VAL A 6 5 H AlphaHelix -81.69 -44.08 1.2 4TZV
ASG SER A 7 6 H AlphaHelix -60.35 -35.38 75.8 4TZV
ASG GLN A 8 7 C Coil -86.24 -136.30 142.5 4TZV
ASG ALA A 9 8 C Coil 62.00 166.90 50.0 4TZV
ASG LYS A 10 9 C Coil -100.70 -59.37 87.7 4TZV
ASG SER A 11 10 C Coil -107.87 112.89 54.7 4TZV
ASG ILE A 12 11 E Strand -122.86 168.04 52.3 4TZV
ASG ILE A 13 12 E Strand -146.23 133.86 31.4 4TZV
ASG ILE A 14 13 E Strand -110.57 137.92 75.7 4TZV
ASG GLY A 15 14 C Coil 105.60 143.66 25.1 4TZV
ASG THR A 16 15 H AlphaHelix -63.67 -50.37 29.8 4TZV
ASG LYS A 17 16 H AlphaHelix -58.50 -45.19 61.9 4TZV
ASG GLN A 18 17 H AlphaHelix -71.49 -26.29 104.6 4TZV
ASG THR A 19 18 H AlphaHelix -75.31 -36.48 1.6 4TZV
ASG VAL A 20 19 H AlphaHelix -73.81 -35.26 43.1 4TZV
ASG LYS A 21 20 H AlphaHelix -65.05 -31.05 57.7 4TZV
ASG ALA A 22 21 H AlphaHelix -75.45 -28.97 3.0 4TZV
ASG LEU A 23 22 H AlphaHelix -70.99 -26.09 10.6 4TZV
ASG LYS A 24 23 H AlphaHelix -70.93 1.87 167.4 4TZV
ASG ARG A 25 24 C Coil -132.85 -8.71 159.6 4TZV
ASG GLY A 26 25 C Coil 61.48 34.38 38.5 4TZV
ASG SER A 27 26 C Coil -99.41 20.80 70.0 4TZV
ASG VAL A 28 27 C Coil -105.71 137.98 11.6 4TZV
ASG LYS A 29 28 C Coil -92.00 -44.59 45.0 4TZV
ASG GLU A 30 29 E Strand -134.47 148.89 56.9 4TZV
ASG VAL A 31 30 E Strand -124.96 124.53 1.4 4TZV
ASG VAL A 32 31 E Strand -117.57 119.52 3.2 4TZV
ASG VAL A 33 32 E Strand -123.94 141.46 6.0 4TZV
ASG ALA A 34 33 T Turn -83.88 150.21 2.8 4TZV
ASG LYS A 35 34 T Turn -89.19 -32.21 100.1 4TZV
ASG ASP A 36 35 T Turn -76.46 -5.13 105.9 4TZV
ASG ALA A 37 36 T Turn -77.12 167.47 25.5 4TZV
ASG ASP A 38 37 C Coil -66.36 132.11 49.3 4TZV
ASG PRO A 39 38 H AlphaHelix -67.66 -24.48 89.9 4TZV
ASG ILE A 40 39 H AlphaHelix -63.90 -25.62 133.9 4TZV
ASG LEU A 41 40 H AlphaHelix -101.17 -24.15 81.4 4TZV
ASG THR A 42 41 H AlphaHelix -85.46 -45.17 25.3 4TZV
ASG SER A 43 42 H AlphaHelix -57.39 -37.03 61.0 4TZV
ASG SER A 44 43 H AlphaHelix -62.12 -31.66 70.2 4TZV
ASG VAL A 45 44 H AlphaHelix -92.93 -34.90 3.0 4TZV
ASG VAL A 46 45 H AlphaHelix -71.71 -24.76 32.3 4TZV
ASG SER A 47 46 H AlphaHelix -64.88 -55.28 65.7 4TZV
ASG LEU A 48 47 H AlphaHelix -65.32 -35.62 33.5 4TZV
ASG ALA A 49 48 H AlphaHelix -63.32 -48.75 0.0 4TZV
ASG GLU A 50 49 H AlphaHelix -67.67 -31.20 135.1 4TZV
ASG ASP A 51 50 H AlphaHelix -70.34 -34.56 85.7 4TZV
ASG GLN A 52 51 H AlphaHelix -72.65 -24.78 85.4 4TZV
ASG GLY A 53 52 C Coil 98.18 6.65 67.3 4TZV
ASG ILE A 54 53 C Coil -81.10 157.89 23.6 4TZV
ASG SER A 55 54 C Coil -72.79 137.84 56.4 4TZV
ASG VAL A 56 55 E Strand -118.26 118.67 53.9 4TZV
ASG SER A 57 56 E Strand -106.68 360.00 57.9 4TZV
ASG VAL A 59 57 C Coil 360.00 163.48 29.1 4TZV
ASG GLU A 60 58 C Coil -67.08 -72.91 75.4 4TZV
ASG SER A 61 59 C Coil -98.42 360.00 32.9 4TZV
ASG LYS A 63 60 H AlphaHelix 360.00 -50.73 89.5 4TZV
ASG LYS A 64 61 H AlphaHelix -66.60 -23.24 59.4 4TZV
ASG LEU A 65 62 H AlphaHelix -65.34 -56.39 0.0 4TZV
ASG GLY A 66 63 H AlphaHelix -61.84 -31.05 0.0 4TZV
ASG LYS A 67 64 H AlphaHelix -65.08 -35.31 88.0 4TZV
ASG ALA A 68 65 H AlphaHelix -77.46 -23.70 18.7 4TZV
ASG CYS A 69 66 H AlphaHelix -80.54 -15.42 16.8 4TZV
ASG GLY A 70 67 C Coil 106.46 -18.99 68.1 4TZV
ASG ILE A 71 68 T Turn -68.80 162.80 38.6 4TZV
ASG GLU A 72 69 T Turn -118.36 27.81 109.8 4TZV
ASG VAL A 73 70 T Turn -140.48 -22.73 129.2 4TZV
ASG GLY A 74 71 T Turn 104.86 155.55 23.7 4TZV
ASG ALA A 75 72 T Turn -137.84 142.30 14.5 4TZV
ASG ALA A 76 73 T Turn -76.84 -43.93 26.6 4TZV
ASG ALA A 77 74 E Strand -144.78 136.02 0.2 4TZV
ASG VAL A 78 75 E Strand -139.30 131.87 0.2 4TZV
ASG ALA A 79 76 E Strand -114.41 133.01 0.6 4TZV
ASG ILE A 80 77 E Strand -85.40 106.96 9.0 4TZV
ASG ILE A 81 78 C Coil -91.63 60.88 26.5 4TZV
ASG LEU A 82 79 C Coil -93.47 360.00 131.8 4TZV