Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/stride/4wu4.std.txt
Дата изменения: Wed Sep 23 15:12:51 2015
Дата индексирования: Sun Apr 10 18:35:32 2016
Кодировка:
REM -------------------------------------------------------------------- 4WU4
REM 4WU4
REM STRIDE: Knowledge-based secondary structure assignment 4WU4
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 4WU4
REM 4WU4
REM Residue accessible surface area calculation 4WU4
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 4WU4
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 4WU4
REM 4WU4
REM ------------------------ General information ----------------------- 4WU4
REM 4WU4
HDR DNA BINDING PROTEIN/DNA 31-OCT-14 4WU4 4WU4
CMP MOL_ID: 1; 4WU4
CMP MOLECULE: RESPONSE REGULATOR RECEIVER DOMAIN PROTEIN; 4WU4
CMP CHAIN: A, B; 4WU4
CMP ENGINEERED: YES; 4WU4
CMP MOL_ID: 2; 4WU4
CMP MOLECULE: DNA (5'- 4WU4
CMP D(P*GP*GP*AP*CP*TP*TP*AP*AP*GP*AP*AP*CP*GP*AP*TP*TP*T)-3'); 4WU4
CMP CHAIN: G; 4WU4
CMP ENGINEERED: YES; 4WU4
CMP MOL_ID: 3; 4WU4
CMP MOLECULE: DNA (5'- 4WU4
CMP D(P*AP*AP*AP*TP*CP*GP*TP*TP*CP*TP*TP*AP*AP*GP*TP*CP*C)-3'); 4WU4
CMP CHAIN: H; 4WU4
CMP ENGINEERED: YES 4WU4
SRC MOL_ID: 1; 4WU4
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 4WU4
SRC EXPRESSION_SYSTEM_TAXID: 469008; 4WU4
SRC EXPRESSION_SYSTEM_STRAIN: BL21(DE3); 4WU4
SRC EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; 4WU4
SRC EXPRESSION_SYSTEM_PLASMID: PETDUET; 4WU4
SRC MOL_ID: 2; 4WU4
SRC SYNTHETIC: YES; 4WU4
SRC ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS S613; 4WU4
SRC ORGANISM_TAXID: 699185; 4WU4
SRC MOL_ID: 3; 4WU4
SRC SYNTHETIC: YES; 4WU4
SRC ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS S613; 4WU4
SRC ORGANISM_TAXID: 699185 4WU4
AUT M.DAVLIEVA,Y.SHAMOO 4WU4
REM 4WU4
REM -------------------- Secondary structure summary ------------------- 4WU4
REM 4WU4
CHN /data/npidb/pdb/pdb_new/all/pdb4wu4.pdb A 4WU4
REM 4WU4
REM . . . . . 4WU4
SEQ 1 MVLHEDLTNREHEILMLIAQGKSNQEIADELFITLKTVKTHVSNILAKLD 50 4WU4
STR GGGG HHHHHHHHHHH HHHHHHHH HHHHHHHHHHHHHHH 4WU4
REM 4WU4
REM . 4WU4
SEQ 51 VDNRTQAAIYAFQHGLAK 68 4WU4
STR HHHHHHHHHHH 4WU4
REM 4WU4
CHN /data/npidb/pdb/pdb_new/all/pdb4wu4.pdb B 4WU4
REM 4WU4
REM . . . . . 4WU4
SEQ 1 MVLHEDLTNREHEILMLIAQGKSNQEIADELFITLKTVKTHVSNILAKLD 50 4WU4
STR GGGG HHHHHHHHHHH HHHHHHHH HHHHHHHHHHHHHHH 4WU4
REM 4WU4
REM . 4WU4
SEQ 51 VDNRTQAAIYAFQHGLAK 68 4WU4
STR HHHHHHHHHHH 4WU4
REM 4WU4
REM 4WU4
REM 4WU4
LOC AlphaHelix ASN 147 A ALA 157 A 4WU4
LOC AlphaHelix ASN 162 A LEU 169 A 4WU4
LOC AlphaHelix LEU 173 A LEU 187 A 4WU4
LOC AlphaHelix ARG 192 A HIS 202 A 4WU4
LOC AlphaHelix ASN 147 B ALA 157 B 4WU4
LOC AlphaHelix ASN 162 B LEU 169 B 4WU4
LOC AlphaHelix LEU 173 B LEU 187 B 4WU4
LOC AlphaHelix ARG 192 B HIS 202 B 4WU4
LOC 310Helix LEU 141 A ASP 144 A 4WU4
LOC 310Helix LEU 141 B ASP 144 B 4WU4
REM 4WU4
REM --------------- Detailed secondary structure assignment------------- 4WU4
REM 4WU4
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 4WU4
ASG MET A 139 1 C Coil 360.00 131.23 204.6 4WU4
ASG VAL A 140 2 C Coil -118.23 107.94 57.0 4WU4
ASG LEU A 141 3 G 310Helix -68.25 -30.41 54.4 4WU4
ASG HIS A 142 4 G 310Helix -84.10 -4.73 34.3 4WU4
ASG GLU A 143 5 G 310Helix -75.14 -12.37 134.6 4WU4
ASG ASP A 144 6 G 310Helix -82.49 -7.75 90.2 4WU4
ASG LEU A 145 7 C Coil -74.02 133.65 16.4 4WU4
ASG THR A 146 8 C Coil -69.30 168.10 65.3 4WU4
ASG ASN A 147 9 H AlphaHelix -59.90 -42.93 148.0 4WU4
ASG ARG A 148 10 H AlphaHelix -64.68 -42.68 81.5 4WU4
ASG GLU A 149 11 H AlphaHelix -65.05 -44.46 10.4 4WU4
ASG HIS A 150 12 H AlphaHelix -63.93 -34.34 62.5 4WU4
ASG GLU A 151 13 H AlphaHelix -64.12 -38.35 87.6 4WU4
ASG ILE A 152 14 H AlphaHelix -78.98 -30.64 0.0 4WU4
ASG LEU A 153 15 H AlphaHelix -61.09 -38.96 0.0 4WU4
ASG MET A 154 16 H AlphaHelix -61.28 -43.44 45.5 4WU4
ASG LEU A 155 17 H AlphaHelix -67.43 -37.07 7.0 4WU4
ASG ILE A 156 18 H AlphaHelix -60.86 -41.74 0.8 4WU4
ASG ALA A 157 19 H AlphaHelix -75.14 -2.98 3.0 4WU4
ASG GLN A 158 20 C Coil -102.65 5.04 112.1 4WU4
ASG GLY A 159 21 C Coil 72.59 35.20 4.7 4WU4
ASG LYS A 160 22 C Coil -98.34 141.83 53.4 4WU4
ASG SER A 161 23 C Coil -69.75 167.85 50.0 4WU4
ASG ASN A 162 24 H AlphaHelix -63.26 -33.51 34.7 4WU4
ASG GLN A 163 25 H AlphaHelix -71.08 -37.93 89.4 4WU4
ASG GLU A 164 26 H AlphaHelix -70.66 -31.74 100.1 4WU4
ASG ILE A 165 27 H AlphaHelix -70.52 -40.05 0.0 4WU4
ASG ALA A 166 28 H AlphaHelix -60.75 -43.76 1.1 4WU4
ASG ASP A 167 29 H AlphaHelix -68.58 -35.70 105.1 4WU4
ASG GLU A 168 30 H AlphaHelix -73.32 -31.60 95.2 4WU4
ASG LEU A 169 31 H AlphaHelix -106.59 11.44 18.2 4WU4
ASG PHE A 170 32 C Coil 55.35 37.75 197.3 4WU4
ASG ILE A 171 33 C Coil -127.69 171.78 42.2 4WU4
ASG THR A 172 34 C Coil -73.43 157.29 90.9 4WU4
ASG LEU A 173 35 H AlphaHelix -60.22 -34.76 63.7 4WU4
ASG LYS A 174 36 H AlphaHelix -62.80 -47.25 142.5 4WU4
ASG THR A 175 37 H AlphaHelix -58.74 -40.88 48.8 4WU4
ASG VAL A 176 38 H AlphaHelix -61.92 -46.92 0.0 4WU4
ASG LYS A 177 39 H AlphaHelix -60.77 -36.27 112.7 4WU4
ASG THR A 178 40 H AlphaHelix -62.49 -46.96 54.5 4WU4
ASG HIS A 179 41 H AlphaHelix -64.26 -43.53 35.5 4WU4
ASG VAL A 180 42 H AlphaHelix -60.42 -47.03 9.8 4WU4
ASG SER A 181 43 H AlphaHelix -60.89 -37.64 73.4 4WU4
ASG ASN A 182 44 H AlphaHelix -67.37 -40.34 71.7 4WU4
ASG ILE A 183 45 H AlphaHelix -62.97 -47.33 0.0 4WU4
ASG LEU A 184 46 H AlphaHelix -56.23 -42.66 28.8 4WU4
ASG ALA A 185 47 H AlphaHelix -68.30 -44.49 74.3 4WU4
ASG LYS A 186 48 H AlphaHelix -68.87 -31.84 69.3 4WU4
ASG LEU A 187 49 H AlphaHelix -89.95 -3.05 4.0 4WU4
ASG ASP A 188 50 C Coil 56.46 51.11 133.8 4WU4
ASG VAL A 189 51 C Coil -129.00 172.77 23.7 4WU4
ASG ASP A 190 52 C Coil -110.33 -14.01 135.9 4WU4
ASG ASN A 191 53 C Coil -153.95 172.87 55.2 4WU4
ASG ARG A 192 54 H AlphaHelix -68.42 -25.31 54.2 4WU4
ASG THR A 193 55 H AlphaHelix -67.90 -43.26 8.0 4WU4
ASG GLN A 194 56 H AlphaHelix -70.25 -23.11 44.3 4WU4
ASG ALA A 195 57 H AlphaHelix -75.90 -42.96 0.0 4WU4
ASG ALA A 196 58 H AlphaHelix -62.92 -42.92 1.0 4WU4
ASG ILE A 197 59 H AlphaHelix -57.66 -43.47 11.6 4WU4
ASG TYR A 198 60 H AlphaHelix -56.56 -48.43 19.3 4WU4
ASG ALA A 199 61 H AlphaHelix -58.54 -40.30 0.0 4WU4
ASG PHE A 200 62 H AlphaHelix -74.05 -37.45 26.0 4WU4
ASG GLN A 201 63 H AlphaHelix -76.34 -15.64 111.5 4WU4
ASG HIS A 202 64 H AlphaHelix -112.53 17.74 92.0 4WU4
ASG GLY A 203 65 C Coil 63.33 21.68 67.2 4WU4
ASG LEU A 204 66 C Coil -81.19 -28.62 39.3 4WU4
ASG ALA A 205 67 C Coil -140.14 157.44 19.6 4WU4
ASG LYS A 206 68 C Coil -158.39 360.00 210.6 4WU4
ASG MET B 139 1 C Coil 360.00 71.00 214.7 4WU4
ASG VAL B 140 2 C Coil -71.84 96.25 70.8 4WU4
ASG LEU B 141 3 G 310Helix -66.24 -35.94 50.5 4WU4
ASG HIS B 142 4 G 310Helix -73.77 -9.14 37.2 4WU4
ASG GLU B 143 5 G 310Helix -79.20 -9.68 141.8 4WU4
ASG ASP B 144 6 G 310Helix -87.20 -9.23 107.7 4WU4
ASG LEU B 145 7 C Coil -67.43 139.42 19.2 4WU4
ASG THR B 146 8 C Coil -74.71 170.32 65.7 4WU4
ASG ASN B 147 9 H AlphaHelix -65.06 -31.93 148.0 4WU4
ASG ARG B 148 10 H AlphaHelix -78.87 -38.06 82.6 4WU4
ASG GLU B 149 11 H AlphaHelix -63.26 -42.94 8.8 4WU4
ASG HIS B 150 12 H AlphaHelix -61.97 -41.88 63.3 4WU4
ASG GLU B 151 13 H AlphaHelix -59.72 -35.91 80.2 4WU4
ASG ILE B 152 14 H AlphaHelix -79.76 -32.83 0.0 4WU4
ASG LEU B 153 15 H AlphaHelix -63.11 -37.56 0.0 4WU4
ASG MET B 154 16 H AlphaHelix -61.67 -36.73 35.2 4WU4
ASG LEU B 155 17 H AlphaHelix -75.84 -32.45 10.4 4WU4
ASG ILE B 156 18 H AlphaHelix -63.92 -38.51 0.3 4WU4
ASG ALA B 157 19 H AlphaHelix -74.85 -5.06 2.3 4WU4
ASG GLN B 158 20 C Coil -103.52 3.07 121.0 4WU4
ASG GLY B 159 21 C Coil 88.93 10.45 6.1 4WU4
ASG LYS B 160 22 C Coil -71.95 140.75 64.1 4WU4
ASG SER B 161 23 C Coil -79.85 169.21 48.5 4WU4
ASG ASN B 162 24 H AlphaHelix -61.79 -36.57 35.5 4WU4
ASG GLN B 163 25 H AlphaHelix -71.47 -41.61 92.2 4WU4
ASG GLU B 164 26 H AlphaHelix -61.06 -37.45 93.0 4WU4
ASG ILE B 165 27 H AlphaHelix -66.78 -40.43 0.0 4WU4
ASG ALA B 166 28 H AlphaHelix -62.21 -39.67 2.4 4WU4
ASG ASP B 167 29 H AlphaHelix -73.62 -34.42 98.1 4WU4
ASG GLU B 168 30 H AlphaHelix -76.75 -32.28 98.1 4WU4
ASG LEU B 169 31 H AlphaHelix -97.93 -1.07 18.0 4WU4
ASG PHE B 170 32 C Coil 55.59 47.29 184.2 4WU4
ASG ILE B 171 33 C Coil -132.22 166.99 42.8 4WU4
ASG THR B 172 34 C Coil -74.11 171.44 86.6 4WU4
ASG LEU B 173 35 H AlphaHelix -70.59 -36.62 65.2 4WU4
ASG LYS B 174 36 H AlphaHelix -58.53 -43.79 149.2 4WU4
ASG THR B 175 37 H AlphaHelix -64.49 -40.75 49.6 4WU4
ASG VAL B 176 38 H AlphaHelix -63.58 -48.17 0.0 4WU4
ASG LYS B 177 39 H AlphaHelix -58.91 -33.18 112.8 4WU4
ASG THR B 178 40 H AlphaHelix -66.44 -45.30 52.8 4WU4
ASG HIS B 179 41 H AlphaHelix -64.36 -44.35 35.3 4WU4
ASG VAL B 180 42 H AlphaHelix -58.86 -46.19 10.0 4WU4
ASG SER B 181 43 H AlphaHelix -64.14 -34.79 77.6 4WU4
ASG ASN B 182 44 H AlphaHelix -67.61 -39.91 71.0 4WU4
ASG ILE B 183 45 H AlphaHelix -62.50 -47.85 0.0 4WU4
ASG LEU B 184 46 H AlphaHelix -60.59 -34.29 27.4 4WU4
ASG ALA B 185 47 H AlphaHelix -70.51 -44.34 74.1 4WU4
ASG LYS B 186 48 H AlphaHelix -72.87 -31.37 69.8 4WU4
ASG LEU B 187 49 H AlphaHelix -88.32 -1.25 4.3 4WU4
ASG ASP B 188 50 C Coil 56.42 47.39 136.3 4WU4
ASG VAL B 189 51 C Coil -128.23 167.11 24.9 4WU4
ASG ASP B 190 52 C Coil -97.04 -29.46 135.3 4WU4
ASG ASN B 191 53 C Coil -148.44 173.89 59.4 4WU4
ASG ARG B 192 54 H AlphaHelix -65.77 -28.33 52.6 4WU4
ASG THR B 193 55 H AlphaHelix -64.57 -46.21 7.2 4WU4
ASG GLN B 194 56 H AlphaHelix -67.60 -28.33 42.1 4WU4
ASG ALA B 195 57 H AlphaHelix -70.62 -40.80 0.0 4WU4
ASG ALA B 196 58 H AlphaHelix -63.70 -39.61 1.2 4WU4
ASG ILE B 197 59 H AlphaHelix -64.05 -37.66 11.0 4WU4
ASG TYR B 198 60 H AlphaHelix -60.02 -47.87 22.9 4WU4
ASG ALA B 199 61 H AlphaHelix -59.65 -35.49 0.0 4WU4
ASG PHE B 200 62 H AlphaHelix -79.73 -37.83 27.1 4WU4
ASG GLN B 201 63 H AlphaHelix -74.34 -18.51 102.3 4WU4
ASG HIS B 202 64 H AlphaHelix -121.42 24.77 106.9 4WU4
ASG GLY B 203 65 C Coil 67.60 30.60 38.8 4WU4
ASG LEU B 204 66 C Coil -88.74 -29.09 40.1 4WU4
ASG ALA B 205 67 C Coil -132.05 145.95 18.4 4WU4
ASG LYS B 206 68 C Coil -141.13 360.00 191.2 4WU4