Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/stride/4x9j.std.txt Дата изменения: Mon Jul 20 17:59:19 2015 Дата индексирования: Sun Apr 10 18:36:21 2016 Кодировка:

REM -------------------------------------------------------------------- 4X9J
REM 4X9J
REM STRIDE: Knowledge-based secondary structure assignment 4X9J
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 4X9J
REM 4X9J
REM Residue accessible surface area calculation 4X9J
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 4X9J
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 4X9J
REM 4X9J
REM ------------------------ General information ----------------------- 4X9J
REM 4X9J
HDR TRANSCRIPTION REGULATOR/DNA 11-DEC-14 4X9J 4X9J
CMP MOL_ID: 1; 4X9J
CMP MOLECULE: EARLY GROWTH RESPONSE PROTEIN 1; 4X9J
CMP CHAIN: A; 4X9J
CMP FRAGMENT: UNP RESIDUES 335-423; 4X9J
CMP SYNONYM: EGR-1,AT225,NERVE GROWTH FACTOR-INDUCED PROTEIN A,N 4X9J
CMP TRANSCRIPTION FACTOR ETR103,TRANSCRIPTION FACTOR ZIF268,ZINC 4X9J
CMP PROTEIN 225,ZINC FINGER PROTEIN KROX-24; 4X9J
CMP ENGINEERED: YES; 4X9J
CMP MOL_ID: 2; 4X9J
CMP MOLECULE: DNA (5'-D(*AP*GP*(5CM)P*GP*TP*GP*GP*GP*(5CM)P*GP*T 4X9J
CMP CHAIN: B; 4X9J
CMP ENGINEERED: YES; 4X9J
CMP MOL_ID: 3; 4X9J
CMP MOLECULE: DNA (5'-D(*TP*AP*(5CM)P*GP*CP*CP*CP*AP*(5CM)P*GP*C 4X9J
CMP CHAIN: C; 4X9J
CMP ENGINEERED: YES 4X9J
SRC MOL_ID: 1; 4X9J
SRC ORGANISM_SCIENTIFIC: HOMO SAPIENS; 4X9J
SRC ORGANISM_COMMON: HUMAN; 4X9J
SRC ORGANISM_TAXID: 9606; 4X9J
SRC GENE: EGR1, KROX24, ZNF225; 4X9J
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 4X9J
SRC EXPRESSION_SYSTEM_TAXID: 562; 4X9J
SRC MOL_ID: 2; 4X9J
SRC SYNTHETIC: YES; 4X9J
SRC ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; 4X9J
SRC ORGANISM_TAXID: 32630; 4X9J
SRC MOL_ID: 3; 4X9J
SRC SYNTHETIC: YES; 4X9J
SRC ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; 4X9J
SRC ORGANISM_TAXID: 32630 4X9J
AUT M.A.WHITE,L.ZANDARASHVILI,J.IWAHARA 4X9J
REM 4X9J
REM -------------------- Secondary structure summary ------------------- 4X9J
REM 4X9J
CHN /data/npidb/pdb/pdb_new/all/pdb4x9j.pdb A 4X9J
REM 4X9J
REM . . . . . 4X9J
SEQ 1 ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLT 50 4X9J
STR EE TTTT EETTHHHHHHHHHHHH EETTTTT EE HHHHH 4X9J
REM 4X9J
REM . . . 4X9J
SEQ 51 THIRTHTGEKPFACDICGRKFARSDERKRHTKIHLR 86 4X9J
STR HHHHHHH EETTTTT EE HHHHHHHHGGG 4X9J
REM 4X9J
REM 4X9J
REM 4X9J
LOC AlphaHelix SER 119 A THR 130 A 4X9J
LOC AlphaHelix SER 147 A THR 158 A 4X9J
LOC AlphaHelix SER 175 A THR 182 A 4X9J
LOC 310Helix LYS 183 A HIS 185 A 4X9J
LOC Strand TYR 105 A ALA 106 A 4X9J
LOC Strand ARG 115 A PHE 116 A 4X9J
LOC Strand PHE 135 A GLN 136 A 4X9J
LOC Strand ASN 143 A PHE 144 A 4X9J
LOC Strand PHE 163 A ALA 164 A 4X9J
LOC Strand LYS 171 A PHE 172 A 4X9J
LOC TurnI VAL 109 A CYS 112 A 4X9J
LOC TurnVIII PHE 116 A SER 119 A 4X9J
LOC TurnIV CYS 137 A CYS 140 A 4X9J
LOC TurnI ARG 138 A MET 141 A 4X9J
LOC TurnIV CYS 165 A CYS 168 A 4X9J
LOC TurnI ASP 166 A GLY 169 A 4X9J
REM 4X9J
REM --------------- Detailed secondary structure assignment------------- 4X9J
REM 4X9J
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 4X9J
ASG GLU A 102 1 C Coil 360.00 160.92 188.5 4X9J
ASG ARG A 103 2 C Coil -123.34 76.33 123.5 4X9J
ASG PRO A 104 3 C Coil -70.26 -13.80 77.3 4X9J
ASG TYR A 105 4 E Strand -99.27 99.56 99.5 4X9J
ASG ALA A 106 5 E Strand -93.90 145.75 39.2 4X9J
ASG CYS A 107 6 C Coil -74.76 127.30 9.7 4X9J
ASG PRO A 108 7 C Coil -84.48 -1.66 101.2 4X9J
ASG VAL A 109 8 T Turn -73.90 136.60 33.0 4X9J
ASG GLU A 110 9 T Turn -58.37 -50.72 171.7 4X9J
ASG SER A 111 10 T Turn -69.58 -1.68 111.2 4X9J
ASG CYS A 112 11 T Turn -117.30 127.38 22.2 4X9J
ASG ASP A 113 12 C Coil -112.85 17.37 141.9 4X9J
ASG ARG A 114 13 C Coil -67.92 145.61 104.8 4X9J
ASG ARG A 115 14 E Strand -133.47 161.97 115.8 4X9J
ASG PHE A 116 15 E Strand -143.12 148.39 5.0 4X9J
ASG SER A 117 16 T Turn -74.94 -34.64 71.3 4X9J
ASG ARG A 118 17 T Turn -118.59 140.52 155.4 4X9J
ASG SER A 119 18 H AlphaHelix -64.52 -35.95 61.6 4X9J
ASG ASP A 120 19 H AlphaHelix -68.83 -27.46 77.7 4X9J
ASG GLU A 121 20 H AlphaHelix -70.53 -38.11 71.6 4X9J
ASG LEU A 122 21 H AlphaHelix -62.54 -43.76 28.1 4X9J
ASG THR A 123 22 H AlphaHelix -61.16 -40.82 83.7 4X9J
ASG ARG A 124 23 H AlphaHelix -63.31 -45.86 98.8 4X9J
ASG HIS A 125 24 H AlphaHelix -57.52 -38.52 17.5 4X9J
ASG ILE A 126 25 H AlphaHelix -60.08 -27.84 45.5 4X9J
ASG ARG A 127 26 H AlphaHelix -57.61 -25.26 66.9 4X9J
ASG ILE A 128 27 H AlphaHelix -65.04 -43.59 126.3 4X9J
ASG HIS A 129 28 H AlphaHelix -73.19 -33.43 76.0 4X9J
ASG THR A 130 29 H AlphaHelix -86.84 -19.19 88.7 4X9J
ASG GLY A 131 30 C Coil 74.87 12.11 48.5 4X9J
ASG GLN A 132 31 C Coil -68.66 124.66 97.1 4X9J
ASG LYS A 133 32 C Coil -132.69 80.42 118.7 4X9J
ASG PRO A 134 33 C Coil -75.94 -4.50 56.7 4X9J
ASG PHE A 135 34 E Strand -119.92 110.96 64.5 4X9J
ASG GLN A 136 35 E Strand -106.21 133.89 101.8 4X9J
ASG CYS A 137 36 T Turn -69.25 125.21 0.4 4X9J
ASG ARG A 138 37 T Turn -70.75 -21.17 221.4 4X9J
ASG ILE A 139 38 T Turn -87.04 -50.18 92.9 4X9J
ASG CYS A 140 39 T Turn -113.49 -2.99 53.9 4X9J
ASG MET A 141 40 T Turn 75.27 2.45 112.0 4X9J
ASG ARG A 142 41 C Coil -64.25 142.21 157.1 4X9J
ASG ASN A 143 42 E Strand -103.76 147.49 73.9 4X9J
ASG PHE A 144 43 E Strand -132.75 147.00 28.8 4X9J
ASG SER A 145 44 C Coil -68.43 -24.91 47.7 4X9J
ASG ARG A 146 45 C Coil -135.45 136.07 66.8 4X9J
ASG SER A 147 46 H AlphaHelix -64.57 -34.72 65.7 4X9J
ASG ASP A 148 47 H AlphaHelix -69.77 -35.85 73.9 4X9J
ASG HIS A 149 48 H AlphaHelix -73.74 -29.12 83.1 4X9J
ASG LEU A 150 49 H AlphaHelix -59.98 -48.50 25.3 4X9J
ASG THR A 151 50 H AlphaHelix -57.54 -47.20 70.3 4X9J
ASG THR A 152 51 H AlphaHelix -68.12 -35.36 35.4 4X9J
ASG HIS A 153 52 H AlphaHelix -57.24 -44.04 31.5 4X9J
ASG ILE A 154 53 H AlphaHelix -55.89 -32.34 50.1 4X9J
ASG ARG A 155 54 H AlphaHelix -63.40 -20.18 41.4 4X9J
ASG THR A 156 55 H AlphaHelix -67.16 -27.75 100.0 4X9J
ASG HIS A 157 56 H AlphaHelix -87.33 -39.45 77.3 4X9J
ASG THR A 158 57 H AlphaHelix -88.55 -22.54 81.4 4X9J
ASG GLY A 159 58 C Coil 80.78 8.52 48.3 4X9J
ASG GLU A 160 59 C Coil -65.94 133.93 103.0 4X9J
ASG LYS A 161 60 C Coil -138.48 83.54 118.7 4X9J
ASG PRO A 162 61 C Coil -73.29 -15.91 61.9 4X9J
ASG PHE A 163 62 E Strand -109.73 109.45 54.5 4X9J
ASG ALA A 164 63 E Strand -99.45 138.08 36.2 4X9J
ASG CYS A 165 64 T Turn -63.22 128.70 4.0 4X9J
ASG ASP A 166 65 T Turn -62.73 -32.69 155.2 4X9J
ASG ILE A 167 66 T Turn -80.18 -45.44 115.1 4X9J
ASG CYS A 168 67 T Turn -119.65 -11.97 69.1 4X9J
ASG GLY A 169 68 T Turn 84.44 -3.41 40.7 4X9J
ASG ARG A 170 69 C Coil -59.11 137.62 158.5 4X9J
ASG LYS A 171 70 E Strand -102.50 143.00 131.4 4X9J
ASG PHE A 172 71 E Strand -132.68 151.44 14.1 4X9J
ASG ALA A 173 72 C Coil -70.76 -27.24 19.2 4X9J
ASG ARG A 174 73 C Coil -129.38 149.37 109.9 4X9J
ASG SER A 175 74 H AlphaHelix -65.47 -37.76 63.7 4X9J
ASG ASP A 176 75 H AlphaHelix -69.02 -28.04 78.6 4X9J
ASG GLU A 177 76 H AlphaHelix -70.56 -44.59 64.3 4X9J
ASG ARG A 178 77 H AlphaHelix -58.43 -45.70 76.4 4X9J
ASG LYS A 179 78 H AlphaHelix -56.31 -45.22 162.5 4X9J
ASG ARG A 180 79 H AlphaHelix -62.90 -33.17 171.7 4X9J
ASG HIS A 181 80 H AlphaHelix -74.85 -43.87 18.2 4X9J
ASG THR A 182 81 H AlphaHelix -54.81 -32.11 48.5 4X9J
ASG LYS A 183 82 G 310Helix -66.30 -17.51 120.6 4X9J
ASG ILE A 184 83 G 310Helix -67.00 -17.46 106.3 4X9J
ASG HIS A 185 84 G 310Helix -80.17 -6.91 76.4 4X9J
ASG LEU A 186 85 C Coil -66.61 175.25 134.2 4X9J
ASG ARG A 187 86 C Coil -44.48 360.00 298.4 4X9J