Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.genebee.msu.ru/~bennigsen/nhunt_files/ex3/nhunt-2.out Дата изменения: Mon Oct 10 18:48:19 2011 Дата индексирования: Mon Oct 1 19:31:33 2012 Кодировка:

Nhunt 1.5.6.2 [May-16-2011]

Length of query file: 125 bp
Length of database file: 5419036 bp

lambda = 0.204

Number Sequences producing significant alignments: Score E-value
1 CP001176 108.8 0.0165228
2 CP001176 101.6 0.0723522
3 CP001176 94.9 0.28342
4 CP001176 94.2 0.324022
5 CP001176 90.1 0.74865
6 CP001176 89.6 0.827658



Alignment 1: misc_240777 from 13 to 125, CP001176 from 2718022 to 2717913
Score: 108.8 (35.3 bits), E-value: 0.0165228
Identity = 65/113 (58%)
Strand: Plus/Minus

Query: 13 aaattgactaccttcgtttttttgattaagaatgattttattatcgtaagtaaaattaca 72
| | | || ||| ||| | || || || | | |||| | ||| |||| | |
Sbjct: 2718022 atagtaacctcctgaatttatatgtatacgattagtagtattcaagaaagggaaataaaa 2717963

Query: 73 tgaacatttaaaaaggaaaacgacatgaaaccaaagcacagaatcaacattct 125
|||||||||||| | |||| | | | | || | || || || |
Sbjct: 2717962 tgaacatttaaattg--aaac-tctttcttcttgtgtactggatttacgttat 2717913


Alignment 2: misc_240777 from 20 to 105, CP001176 from 503063 to 503146
Score: 101.6 (33.1 bits), E-value: 0.0723522
Identity = 53/86 (62%)
Strand: Plus/Plus

Query: 20 ctaccttcgtttttttgattaagaatgattttattatcgtaagtaaaattacatgaacat 79
|| | |||||| ||| |||||||| | | | | || |||| | || | ||
Sbjct: 503063 cttcaatcgtttgttttgttaagaataaatat-tcttcataagaataagccttttgacgc 503121

Query: 80 ttaaaaaggaaaacgacatgaaacca 105
|||| |||| || | || | |||
Sbjct: 503122 acaaaagggaagacagc-tggatcca 503146


Alignment 3: misc_240777 from 12 to 98, CP001176 from 4716612 to 4716528
Score: 94.9 (31.2 bits), E-value: 0.28342
Identity = 51/87 (59%)
Strand: Plus/Minus

Query: 12 gaaattgactaccttcgtttttttgattaagaatgattttattatcgtaagtaaaattac 71
| ||| ||| ||||||||||||||| || | || |||| | ||| || |
Sbjct: 4716612 gtaataaactcccttcgtttttttgaa-gggagtttttctatttaagcaagcaactctg- 4716555

Query: 72 atgaacatttaaaaaggaaaacgacat 98
||| | ||||| | |||
Sbjct: 4716554 atgcgttatgctgaaggacttcttcat 4716528


Alignment 4: misc_240777 from 7 to 95, CP001176 from 508800 to 508709
Score: 94.2 (31.0 bits), E-value: 0.324022
Identity = 56/92 (61%)
Strand: Plus/Minus

Query: 7 gtggcgaaattgactaccttcgtttttttg--attaagaatgattttatt-atcgtaagt 63
||| | || |||| || || |||||||| |||| | ||| || || || |
Sbjct: 508800 gtgtcaaacttgatccccctcatttttttgcatataagtactattataaagattttagga 508741

Query: 64 aaaattacatgaacatttaaaaaggaaaacga 95
|||| | | | | | | | |||||| ||
Sbjct: 508740 aaaaatttaagtaagatgacataggaaataga 508709


Alignment 5: misc_240777 from 7 to 103, CP001176 from 4516538 to 4516444
Score: 90.1 (29.8 bits), E-value: 0.74865
Identity = 55/97 (57%)
Strand: Plus/Minus

Query: 7 gtggcgaaattgactaccttcgtttttttgattaagaatgattttattatcgtaagtaaa 66
| || |||||| || ||| ||||||| | | || || | ||| | | |
Sbjct: 4516538 gaggggaaattttctccctatattttttttgtcagaaaaaataaaactattgatttttta 4516479

Query: 67 attacatgaacatttaaaaaggaaaacgacatgaaac 103
| | | ||| ||| || ||||| ||| | |
Sbjct: 4516478 aaaaatagcccatataataa--aaaacaacaagtttc 4516444


Alignment 6: misc_240777 from 20 to 67, CP001176 from 288827 to 288874
Score: 89.6 (29.6 bits), E-value: 0.827658
Identity = 32/48 (67%)
Strand: Plus/Plus

Query: 20 ctaccttcgtttttttgattaagaatgattttattatcgtaagtaaaa 67
| ||| ||| | ||| || | |||| ||| | ||||||||||
Sbjct: 288827 ccaccatcgatcattttctttaatttgatggaattgtggtaagtaaaa 288874