Документ взят из кэша поисковой машины. Адрес оригинального документа : http://kodomo.cmm.msu.ru/~tregubova/projects/Term_4/block2/mark12.msf Дата изменения: Sun May 23 13:45:54 2010 Дата индексирования: Sat Jun 26 05:30:23 2010 Кодировка:

!!AA_MULTIPLE_ALIGNMENT 1.0

GDC ******** GeneDoc Multiple Sequence Alignment Editor ********
GDC 0107070190000cffffffffffff000000000000000000808080c0c0c0ffff
GDC ff000000000000f43f000000000000f43f000000000000f03f0000000000
GDC 00f03f00A000300000190000cA54696d6573204e657720526f6d616e00A0
GDC 032000200000000000047656e65446f63000000000601444e00024551000
GDC 3535400044b52000546595700064c49564d002841434332435f44414e524
GDC 52c0d0a284143434e325f434849434b2c0d0a4f504d292c0d0a544d48484
GDC d293b0d0a00BBAABAAA0000002a000a00020001B20AAA000a203a2000203
GDC a200000000000000059400000000000000000000c5058000000ffff00004
GDC 7580000ff00ff000041475358000000ffffff0056434147444e535450580
GDC 000ff00ffff00484b525800ff00000000ff4544580000ff000000ff484b5
GDC 245445800ffffff0000ff48524551444e425a5800ff000000ff005957484
GDC b524551444e5354425a580000000000ff00494c56415800ff00008080804
GDC 659574858000000ff808080494c564341474d4659574854505800ffffff0
GDC 000000c505800000000c0c0c047580041411a000000414347535800c0c0c
GDC 0530000564147444e5354505800000000000000484b52580054000052521
GDC a45445800000000ffffff484b524544580020208000000048524551444e4
GDC 25a5800d700d7110108435957484b524551444e5354425a5800000000fff
GDC fff494c564158000100004b4b9f465957485800000000c0c0c0494c56434
GDC 1474d465957485450580052529f0000000300ffffff00000000ffffff808
GDC 08000000000c0c0c00000ABBBBBBBBBBBBBB00ff00A00040001000100010
GDC 001A0018AA000000000000000000000003A00ff00A000000000080564000
GDC 0000000080514000000000000049400000020000000000001440A0000000
GDC 098b20c41000000001025064100000000189806410000000078b10b4100A
GDC AABA00005374616e646172640046464c4c5353535359592a2a43432a574c
GDC 4c4c4c5050505048485151525252524949494d545454544e4e4b4b535352
GDC 5256565656414141414444454547474747002d2d2d2d2d2d2d2d2d2d2d2d
GDC 2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d4d2d2d2d2d2d2d
GDC 2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d00BBBBB000000000
GDC 000000400000000000000000003000700000003750000000269000000017
GDC 3000000007b000000047a0000000575000000067a00000000BBAB0004000
GDC 000000201b7A000000000000594000000000000054400000000000004e40
GDC 00DAAB000000ffffff0302014445484b524e5153540000ff00ff0000024c
GDC 49564d4659574147435000ff000000ff0004014445484b520000ff00ff00
GDC 00024e5153540000ff00ff8000034c49564d46595700ff000000ff000441
GDC 4700ff0000008000080144450000ff00ff000002484b5200ffffffff0000
GDC 034e510000ff00ff800004535400ffffffff8000054c495600ff000000ff
GDC 000646595700ffffff00ff0007414700ff0000008000084d4300ffffff00
GDC 80000000000000Affffff80808000A
mark12.msf MSF: 550 Type: P May 23, 2010 14:45 Check: 5096 ..

Name: ACC2C_DANRE Len: 550 Check: 5847 Weight: 1.00
Name: ACCN2_CHICK Len: 550 Check: 963 Weight: 1.00
Name: OPM Len: 550 Check: 1632 Weight: 1.00
Name: TMHHM Len: 550 Check: 6654 Weight: 1.00

//

1 50
ACC2C_DANRE MTAMKGDSED SIESMRPSNL QVFANNSTLH GMSHIFAYGH MTFRRFLWTL
ACCN2_CHICK MMDLKVD.EE EVDSGQPVSI QAFASSSTLH GISHIFSYER LSLKRVVWAL
OPM ++++++++++ ++++++++++ ++++++++++ ++++++++++ ++++++HHHH
TMHHM IIIIIIIIII IIIIIIIIII IIIIIIIIII IIIIIIIIII IIIIIHHHHH

51 100
ACC2C_DANRE SFMGSLGLLM YVCMDRVYYY FEFPHVTKLD EVAAPNLTFP AVTFCNLNEF
ACCN2_CHICK CFMGSLALLA LVCTNRIQYY FLYPHVTKLD EVAATRLTFP AVTFCNLNEF
OPM HHHHHHHHHH HHHHHHHHHH H......... .......... ..........
TMHHM HHHHHHHHHH HHHHHHHHOO OOOOOOOOOO OOOOOOOOOO OOOOOOOOOO

101 150
ACC2C_DANRE RFSKITKNDL YHVGELLALL NENYQIANPH LADPEVLTLL KEKASFNGFK
ACCN2_CHICK RFSRVTKNDL YHAGELLALL NNRYEIPDTQ TADEKQLEIL QDKANFRNFK
OPM .......... .......... .......... .......... ..........
TMHHM OOOOOOOOOO OOOOOOOOOO OOOOOOOOOO OOOOOOOOOO OOOOOOOOOO

151 200
ACC2C_DANRE PKQFNMTDFY NRTGHDINEM LLQCSFRGEE CFPLNFTTIY TRYGKCYTFN
ACCN2_CHICK PKPFNMLEFY DRAGHDIREM LLSCFFRGEQ CSPEDFKVVF TRYGKCYTFN
OPM .......... .......... .......... .......... ..........
TMHHM OOOOOOOO00 0000000000 0000000000 0000000000 0000000000

201 250
ACC2C_DANRE SGLDGNPLLT TLKGGTGNGL EIMLDIQQDE YLPVWGDTDE TSYEAGIKVQ
ACCN2_CHICK AGQDGKPRLI TMKGGTGNGL EIMLDIQQDE YLPVWGETDE TSFEAGIKVQ
OPM .......... .......... .......... .......... ..........
TMHHM 0000000000 0000000000 0000000000 0000000000 0000000000

251 300
ACC2C_DANRE IHSQDEPPFI DQLGFGVAPG FQTFVSCQQQ LLLYLPPPWG DCRSAPMDSE
ACCN2_CHICK IHSQDEPPLI DQLGFGVAPG FQTFVSCQEQ RLIYLPPPWG DCKATTGDSE
OPM .......... .......... .......... .......... ..........
TMHHM 0000000000 0000000000 0000000000 0000000000 0000000000

301 350
ACC2C_DANRE YFSTYSITAC RIDCETRYLL ENCNCRMVHM PGTSTVCTPE QYKDCADPAL
ACCN2_CHICK FYDTYSITAC RIDCETRYLV ENCNCRMVHM PGDAPYCTPE QYKECADPAL
OPM .......... .......... .......... .......... ..........
TMHHM 0000000000 0000000000 0000000000 0000000000 0000000000

351 400
ACC2C_DANRE DFLVEKDNDY CVCDTPCNMT RYGKELSMVK IPSKASAKYL AKKFNKTEQY
ACCN2_CHICK DFLVEKDNEY CVCEMPCNVT RYGKELSMVK IPSKASAKYL AKKYNKSEQY
OPM .......... .......... .......... .......... ..........
TMHHM 0000000000 0000000000 0000000000 0000000000 0000000000

401 450
ACC2C_DANRE ITDNILVLDI FFEALNYEKI EQKKAYEVAG LLGDIGGQMG LFIGASVLTI
ACCN2_CHICK IGENILVLDI FFEALNYETI EQKKAYEVAG LLGDIGGQMG LFIGASILTV
OPM .......... .......... .......HHH HHHHHHHHHH HHHHHHHHHH
TMHHM 0000000000 0000000000 0000000000 0000000000 0000000000

451 500
ACC2C_DANRE LEIFDYLYEV LKDKILGSVL RKRRPHRSAS DNLVIVSLHD FK........
ACCN2_CHICK LELFDYAYEV IKHRLCRRGK CRKNHKRNNT DKGVALSMDD VKRHNPCESL
OPM HHH+++++++ ++++++++++ ++++++++++ ++++++++++ ++++++++++
TMHHM 0000000000 0000000000 0000000000 0000000000 0000000000

501 550
ACC2C_DANRE .........I SSVF....LL ASYMCFVCYI VLLNAACVYL PFVVGSNSGK
ACCN2_CHICK RGHPAGMTYA ANILPHHPAR GTFEDFTC~~ ~~~~~~~~~~ ~~~~~~~~~~
OPM ++++++++++ ++++++++++ ++++++++++ ++++++++++ +++++++++.
TMHHM 0000000000 000000000H HHHHHHHHHH HHHHHHHHHH HHIIIIIIII