Документ взят из кэша поисковой машины. Адрес оригинального документа : http://kodomo.cmm.msu.ru/~vovan/Practice9/file.spt Дата изменения: Mon Nov 6 00:51:22 2006 Дата индексирования: Tue Oct 2 08:02:19 2012 Кодировка:

script dna.def
script add.def
restrict none
ZOOM 400
select within (3.5, rpol) and polar
cpk 150
color red
set fontsize 14
set fontstroke 1
label %n %r %a %c
echo protein atoms, generating polar contacts of protein with deoxyribose
pause
cpk off
label off

select within (4.5, rnepol) and hydrophobic and not (*.o???,*.n???)
cpk 150
color blue
label %n %r %a %c
echo protein atoms, generating hydrophobic contacts of protein with deoxyribose
pause
cpk off
label off

select within (3.5, ppol) and polar and (*.o???,*.n???)
cpk 150
color red
label %n %r %a %c
echo protein atoms, generating polar contacts of protein with phosphatic acid
pause
cpk off
label off

select within (3.5, ppol) and hydrophobic and (*.o???,*.n???)
cpk 150
color red
label %n %r %a %c
echo protein atoms, generating polar contacts of hydrophobic protein's residues, containing polar atoms, with phosphatic acid
pause
cpk off
label off

select within (3.5, mjgpol) and polar and (*.o???,*.n???)
cpk 150
color red
label %n %r %a %c
echo protein atoms, generating polar contacts of protein with bases, situated in major groove
pause
cpk off
label off

select within (4.5, mjgnepol) and hydrophobic and not (*.o???,*.n???)
cpk 150
color blue
echo protein atoms, generating hydrophobic contacts of protein with bases, situated in major groove
label %n %r %a %c
pause
cpk off
label off

select within (3.5, migpol) and polar and (*.o???,*.n???)
cpk 150
color red
label %n %r %a %c
echo protein atoms, generating polar contacts of protein with bases, situated in minor groove there are no contacts
pause
cpk off
label off

select within (4.5, mignepol) and hydrophobic and not (*.o???,*.n???)
cpk 150
color red
label %n %r %a %c
echo protein atoms, generating hydrophobic contacts of protein with bases, situated in minor groove: there are no contacts