Документ взят из кэша поисковой машины. Адрес оригинального документа : http://kodomo.cmm.msu.ru/~anuta_al/projects/opt.water Дата изменения: Sun Mar 29 16:53:34 2009 Дата индексирования: Tue Oct 2 11:10:06 2012 Кодировка:

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# Program: water
# Rundate: Sun 29 Mar 2009 18:15:11
# Commandline: water
# [-asequence] recq_ecoli.fasta
# [-bsequence] P50729.fasta
# [-outfile] opt.water
# -auto
# Align_format: srspair
# Report_file: opt.water
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#=======================================
#
# Aligned_sequences: 2
# 1: RECQ_ECOLI
# 2: RECQ_BACSU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 495
# Identity: 167/495 (33.7%)
# Similarity: 264/495 (53.3%)
# Gaps: 84/495 (17.0%)
# Score: 763.5
#
#
#=======================================

RECQ_ECOLI 14 KQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALL 63
:|.|.:.||:..|:.||::||:::|||:|.:.::|||||||||||:|..:
RECQ_BACSU 5 QQTLYQFFGFTSFKKGQQDIIESILSGKDTIAMLPTGGGKSLCYQLPGYM 54

RECQ_ECOLI 64 LNGLTVVVSPLISLMKDQVDQLQANG-VAAACLNSTQTREQQLEVMTGCR 112
|:|:.::||||:|||:|||.||:|.| ..||.|||...|:::..|:. .
RECQ_BACSU 55 LDGMVLIVSPLLSLMEDQVQQLKARGEKRAAALNSMLNRQERQFVLE--H 102

RECQ_ECOLI 113 TGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEY 162
..:.:.||::||.|.....||.|......|..:|||||||:|||||||:|
RECQ_BACSU 103 IHRYKFLYLSPEALQSPYVLEKLKSVPISLFVIDEAHCISEWGHDFRPDY 152

RECQ_ECOLI 163 AALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPN 212
:.|||||::....|.:||||||...|.||::.||.|...:..::|.:|||
RECQ_BACSU 153 SKLGQLRKKLGHPPVLALTATATKETLQDVMNLLELQHAVRHLNSVNRPN 202

RECQ_ECOLI 213 IRYML---MEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSK 259
|...: .:..:.:|::::.|:..:| .||:||.:|...::.|..::||
RECQ_BACSU 203 IALRVENAADTAEKIDRVIQLVENLQG-PGIVYCPTRKWAKELAGEIKSK 251

RECQ_ECOLI 260 GISAA-AYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFV 308
..|.| .||.|||:..|..:|::|..:.|.::..|.|||||::||::|:|
RECQ_BACSU 252 TSSRADFYHGGLESGDRILIQQQFIHNQLDVICCTNAFGMGVDKPDIRYV 301

RECQ_ECOLI 309 VHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPAD-------------- 344
:||.:|:..|::.||.|||||||.|:.::|...|.|
RECQ_BACSU 302 IHFHLPQTAEAFMQEIGRAGRDGKPSVSILLRAPGDFELQEQIIQMESVT 351

RECQ_ECOLI 345 ---MAWLRRCL---EEKPQGQLQDI------------------------- 363
:|.:.|.| ||:.:.:|:|:
RECQ_BACSU 352 AEEIADVIRVLEKTEERDERRLRDVLLQYGVGETQARMMIHLFMQGKTSV 401

RECQ_ECOLI 364 -------------ERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNC 400
:..|::.:....:...|.|..||.||.|..:...||.
RECQ_BACSU 402 ELMKKEISYRMELKLEKMHRVSFLLQRDGCLRQALLTYFDESYEPDDGNL 451

RECQ_ECOLI 401 DIC------------------LDPPKQYDGSTDAQIALSTIGRVN 427
..| :.|...:........:|.|:|.:|
RECQ_BACSU 452 PCCSHCGFDLSLYEQKGERSKMAPLDSWSSELHRIFSLQTVGELN 496


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