Документ взят из кэша поисковой машины. Адрес оригинального документа : http://kodomo.cmm.msu.ru/~anya_fbb/PF00768_seed.txt Дата изменения: Sun May 16 17:50:53 2010 Дата индексирования: Tue Oct 2 04:09:50 2012 Кодировка:

Align MSF: 12 Type: P Sun May 16 15:53:02 2010 Check: 00 ..

Name: DACA_BACST/27-286 Len: 280 Check: 10 Weight: 1.00
Name: Q54906_STRPY/17-270 Len: 280 Check: 10 Weight: 1.00
Name: P72518_STRPN/17-269 Len: 280 Check: 10 Weight: 1.00
Name: DACA_ECOLI/35-273 Len: 280 Check: 10 Weight: 1.00
Name: DACC_ECOLI/28-266 Len: 280 Check: 10 Weight: 1.00
Name: DACD_ECOLI/25-263 Len: 280 Check: 10 Weight: 1.00
Name: DACA_HAEIN/27-263 Len: 280 Check: 10 Weight: 1.00
Name: DACF_BACSU/26-261 Len: 280 Check: 10 Weight: 1.00
Name: DACB_BACSU/21-251 Len: 280 Check: 10 Weight: 1.00
Name: DACX_STRSK/26-273 Len: 280 Check: 10 Weight: 1.00
Name: C4W5J9_ECOLX/32-265 Len: 280 Check: 10 Weight: 1.00
Name: PBP5_PSEAE/19-261 Len: 280 Check: 10 Weight: 1.00

//
DACA_BACST/27-286 TVKAESAP.. ......LDIR ADAAILVDAQ TGRILYEKNI DTVLGIASMT
Q54906_STRPY/17-270 ASTVSGEE.. ......YSVT AKHAIAVDLE SGKVLYEKDA KEVVPVASVS
P72518_STRPN/17-269 VSTAVAQD.. ......FTIA AKHAIAVEAN TGKILYEKDA TQPVEIASIT
DACA_ECOLI/35-273 KTMIPGVP.. .......QID AESYILIDYN SGKVLAEQNA DVRRDPASLT
DACC_ECOLI/28-266 AEQTVEAP.. .......SVD ARAWILMDYA SGKVLAEGNA DEKLDPASLT
DACD_ECOLI/25-263 IPFSPQPP.. .......EIH AGSWVLMDYT TGQILTAGNE HQQRNPASLT
DACA_HAEIN/27-263 MQFGVTPP.. .......QIT AQTYVLMDYN SGAILTALNP DQRQYPASLT
DACF_BACSU/26-261 DGKRTSEL.. .......AHE AKSAVLIERD TGKVLYNKNS NERLAPASMT
DACB_BACSU/21-251 NVNTAHAA.. ......IDVS AKSAIIIDGA SGRVLYAKDE HQKRRIASIT
DACX_STRSK/26-273 PATAVTKP.. .......TIA AVGGYAMNNG TGTTLYTKAA DTRRSTGSTT
C4W5J9_ECOLX/32-265 AATTASQP.. .......EIA SGSAMIVDLN TNKVIYSNHP DLVRPIASIS
PBP5_PSEAE/19-261 TAVSASPPPK AGLPLQQELA SGSALVTDQN TGKVLYSRNP DLVVPIASIT
DACA_BACST/27-286 KMMTEYLLLD AIKAKRVKWD QMYTPSDYVY RLSQ..DRAL SNVPLRKDGK
Q54906_STRPY/17-270 KLLTTYLVYK EVSKGKLNWD SPVTISNYPY ELTT..NYTI SNVPLDKR.K
P72518_STRPN/17-269 KLITVYLVYE ALENGSITLS TPVDISDYPY QLTT..NSEA SNIPMEAR.N
DACA_ECOLI/35-273 KMMTSYVIGQ AMKAGKFKET DLVTIGNDAW ATGNPVFKGS SLMFLKPGMQ
DACC_ECOLI/28-266 KIMTSYVVGQ ALKADKIKLT DMVTVGKDAW ATGNPALRGS SVMFLKPGDQ
DACD_ECOLI/25-263 KLMTGYVVDR AIDSHRITPD DIVTVGRDAW AKDNPVFVGS SLMFLKEGDR
DACA_HAEIN/27-263 KMMTSYVVGV ALKQGKIHNT DMVTIGESAW GRN...FPDS SKMFLDLNTQ
DACF_BACSU/26-261 KIMTMLLIME ALDKGKIKMS DKVRTSEHAA SMG......G SQIFLEPGEE
DACB_BACSU/21-251 KIMTAVLAIE SG.....KMD QTVTVSANAV RTEG...... SAIYLTEGQK
DACX_STRSK/26-273 KIMTAKVVLA QSN.LNLDAK VTIQKAYSDY VVAN....KP SQAHLIVGDK
C4W5J9_ECOLX/32-265 KLMTAMVVLD AR..LPLDEK LKVDISQTPE MKG......V YSRVR.LNSE
PBP5_PSEAE/19-261 KLMTAMVVLD SK..LPLDEV LPIAISETSE MRG......V FSRVR.VGSQ
DACA_BACST/27-286 YTVRELYEAM AIYSANGATV AIAEIIAGSE ......KNFV KMMNDKAKEL
Q54906_STRPY/17-270 YTVKELLSAL VVNNANSPAI ALAEKIGGTE ......PKFV DKMKKQLRQW
P72518_STRPN/17-269 YTVEELLEAT LVSSANSAAI ALAEKIAGSE ......KDFV DMMRAKLLEW
DACA_ECOLI/35-273 VPVSQLIRGI NLQSGNDACV AMADFAAGSQ ......DAFV GLMNSYVNAL
DACC_ECOLI/28-266 VSVADLNKGV IIQSGNDACI ALADYVAGSQ ......ESFI GLMNGYAKKL
DACD_ECOLI/25-263 VSVRDLSRGL IVDSGNDACV ALADYIAGGQ ......RQFV EMMNNYAEKL
DACA_HAEIN/27-263 VSVADLNRGV IVVSGNDATV ALAEHISGNV ......PNFV ETMNKYVQQF
DACF_BACSU/26-261 MTVKEMLKGI AIASGNDASV AMAEFISGSE ......EEFV KKMNKKAKEL
DACB_BACSU/21-251 VKLKDLVYGL MLRSGNDAAV AIAEHVGGSL ......DGFV YMMNQKAEQL
DACX_STRSK/26-273 VTVRQLLYGL MLPSGCDAAY ALADKYGSGS QAAARVKSFI GKMNTAATNL
C4W5J9_ECOLX/32-265 ISRKDMLLLA LMSSENRAAA SLAHHYPGGY ......KAFI KAMNAKAKSL
PBP5_PSEAE/19-261 ISRRDMLLLA LMSSENRAAA SLAQNYPGGK ......NAFV KAMNAKAHAL
DACA_BACST/27-286 GLKDYKFVNA TGLSNKDLKG FHPEGTSTNE ENVMSARAMA MLAYRLLKD.
Q54906_STRPY/17-270 GISDAKVVNS TGLTNHFLGA NTYPNTEPDD ENCFCATDLA VIARHLLLE.
P72518_STRPN/17-269 GIQDATVVNT TGLNNETLGD NIYPGSKKDE ENKLSAYDVA IVARNLIKK.
DACA_ECOLI/35-273 GLKNTHFQTV HGLDADGQ.. .......... ..YSSARDMA LIGQALIRD.
DACC_ECOLI/28-266 GLTNTTFQTV HGLDAPGQ.. .......... ..FSTARDMA LLGKALIHD.
DACD_ECOLI/25-263 HLKDTHFETV HGLDAPGQ.. .......... ..HSSAYDLA VLSRAIIHG.
DACA_HAEIN/27-263 GLKNTNFTTP HGLDDPNQ.. .......... ..YSSARDMA IIGAHIIRD.
DACF_BACSU/26-261 GLKNTSFKNP TGLTEEGH.. .......... ..YSSAYDMA IMAKELLKYE
DACB_BACSU/21-251 GMKNTRFQNP HGLDDHEN.. .......... .HYSTAYDMA ILTKYAMKLK
DACX_STRSK/26-273 GLHNTHFDSF DGIGNGAN.. .......... ..YSTPRHLT KIASSAMKNS
C4W5J9_ECOLX/32-265 GMNNTRFVEP TGLSVHN... .......... ..VSTARDLT KLLIASKQYP
PBP5_PSEAE/19-261 GMKNTRYVEP TGLSLHN... .......... ..VSTARDLT RLLVASRQYP
DACA_BACST/27-286 HPEVLKTASI PHKVFREGTK DEIKMDNWNW MLPGLVYGYE G..VDGLKTG
Q54906_STRPY/17-270 FPEVLKLSSK SSTIF.AGQ. ...TIYSYNY MLKGMPCYRE G..VDGLFVG
P72518_STRPN/17-269 YPQVLEITKK PSSTF.AGM. ...TITSTNY MLEGMPAYRG G..FDGLKTG
DACA_ECOLI/35-273 VPNEYSIYKE KEFTFN.... ......GIRQ LNRNGLLWDN SLNVDGIKTG
DACC_ECOLI/28-266 VPEEYAIHKE KEFTFN.... ......KIRQ PNRNRLLWSS NLNVDGMKTG
DACD_ECOLI/25-263 EPEFYHMYSE KSLTWN.... ......GITQ QNRNGLLWDK TMNVDGLKTG
DACA_HAEIN/27-263 LPEEYKIYSE KNFTFN.... ......KIKQ ANRNGLLWDK TINVDGMKTG
DACF_BACSU/26-261 SITKFTGTYE DYLREN.... ...TDKKFWL VNTNRLIKFY P.GVDGVKTG
DACB_BACSU/21-251 DYQKISGTKI YKAET..... .....MESVW KNKNKLLTML YPYSTGGKTG
DACX_STRSK/26-273 TFRTVVKTKA YTAKTVTKTG ..SIRTMDTW KNTNGLLSSY SG.AIGVKTG
C4W5J9_ECOLX/32-265 LIGQLSTTRE DMATFSNP.. ....TYTLPF RNTNHLVYRD NWNIQLTKTG
PBP5_PSEAE/19-261 LLSQWSTTPE KTVAFRHP.. ....NYTLGF RNTNHLINNK TWNIQLTKTG
DACA_BACST/27-286 YTEFAGNCFT GTAKRN.GVR LISVVMNAKD
Q54906_STRPY/17-270 YSKKAGASFV ATSVEN.QMR VITVVLNADQ
P72518_STRPN/17-269 TTDKAGESFV GTTVEK.GMR VITVVLNAD.
DACA_ECOLI/35-273 HTDKAGYNLV ASATEG.QMR LISAVMGGRT
DACC_ECOLI/28-266 TTAGAGYNLV ASATQG.DMR LISVVLGAKT
DACD_ECOLI/25-263 HTSGAGFNLI ASAVDG.QRR LIAVVMGADS
DACA_HAEIN/27-263 HTSQAGYNLV ASATTSNNMR LISVVMGVPT
DACF_BACSU/26-261 YTGEAKYCLT ASAKKG.NMR AIAVVFGAST
DACB_BACSU/21-251 YTKLAKRTLV STASKD.GID LIAVTINDPN
DACX_STRSK/26-273 SGPEAKYCLV FAATRG.GKT VIGTVLASTS
C4W5J9_ECOLX/32-265 FTNAAGHCLV MRTVIN.NKP VALVVMDAFG
PBP5_PSEAE/19-261 FTNEAGHCLV MRTTIN.RSP VNLVVLDAFG