Документ взят из кэша поисковой машины. Адрес оригинального документа : http://kodomo.cmm.msu.ru/~cherry1989/term2/Gene1.msf Дата изменения: Sun May 4 16:07:59 2008 Дата индексирования: Tue Oct 2 10:05:53 2012 Кодировка:

GDC ******** GeneDoc Multiple Sequence Alignment Editor ********
GDC 0109170190000cffffffffffff000000000000ff00000080c0c0c0c0ffff
GDC ff000000000000f43f000000000000f43f000000000000f03f0000000000
GDC 00f03f00A000300000190000cA54696d6573204e657720526f6d616e00A0
GDC 0320002000000000000000000000601444e000245510003535400044b520
GDC 00546595700064c49564d002854524d445f465241544e2c0d0a54524d445
GDC f46524154542c0d0a54524d445f415a4f53452c0d0a54524d445f4d45544
GDC 64b2c0d0a54524d445f45434f4c492c0d0a54524d445f4e49544f432c0d0
GDC a54524d445f50534541372c0d0a54524d445f50534546352c0d0a54524d4
GDC 45f41434941442c0d0a54524d445f50535941522c0d0a6d54524d445f414
GDC 34941442c0d0a6d54524d445f50535941522c0d0a6d54524d445f4652415
GDC 44e2c0d0a6d54524d445f46524154542c0d0a6d54524d445f4e49544f432
GDC c0d0a6d54524d445f45434f4c492c0d0a6d54524d445f50534541372c0d0
GDC a6d54524d445f50534546352c0d0a6d54524d445f415a4f53452c0d0a6d5
GDC 4524d445f4d4554464b293b0d0a00BBAABABB0000002a000a00020001B20
GDC AAA000a203a2000203a200000000000000059400000000000000000000c5
GDC 058000000ffff000047580000ff00ff000041475358000000ffffff00564
GDC 34147444e535450580000ff00ffff00484b525800ff00000000ff4544580
GDC 000ff000000ff484b5245445800ffffff0000ff48524551444e425a5800f
GDC f000000ff005957484b524551444e5354425a580000000000ff00494c564
GDC 15800ff00008080804659574858000000ff808080494c564341474d46595
GDC 74854505800ffffff0000000c50580000000000000047580000000000000
GDC 0414347535800000000000000564147444e5354505800000000000000484
GDC b52580000000000000045445800000000000000484b52454458000000000
GDC 0000048524551444e425a5800000000000000435957484b524551444e535
GDC 4425a5800000000000000494c56415800000000000000465957485800000
GDC 000000000494c564341474d46595748545058000000000000000300fffff
GDC f00000000ffffff80808000000000c0c0c00000ABBBBBBBBBBBBBB00ff00
GDC A00140001000100010001000100010001000100010001000100010001000
GDC 1000100010001000100010001A0018AA000000000000000000000003A00f
GDC f00A00000000008056400000000000805140000000000000494000000200
GDC 00000000001440A0000000098b20c4100000000102506410000000018980
GDC 6410000000078b10b4100AAABB00005374616e646172640046464c4c5353
GDC 535359592a2a43432a574c4c4c4c5050505048485151525252524949494d
GDC 545454544e4e4b4b5353525256565656414141414444454547474747002d
GDC 2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d
GDC 2d2d2d2d4d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d
GDC 2d2d2d00BAAAB00000000000000140000000000000000000000000000000
GDC 000000000000000000000000000000000000000000000000000030000000
GDC 00000BBAB001400000000000000000000000000000000000000000201b7A
GDC 000000000000594000000000008051400000000000004e4000CAAB000000
GDC ffffff0302014445484b524e5153540000ff00ff0000024c49564d465957
GDC 4147435000ff000000ff0004014445484b520000ff00ff0000024e515354
GDC 0000ff00ff8000034c49564d46595700ff000000ff0004414700ff000000
GDC 8000080144450000ff00ff000002484b5200ffffffff0000034e510000ff
GDC 00ff800004535400ffffffff8000054c495600ff000000ff000646595700
GDC ffffff00ff0007414700ff0000008000084d4300ffffff00800000000000
GDC 00Affffff80808000A03029bA00000000000059400000000000005440000
GDC 0000000004e4000CAAB000000ff80c00302014445484b524e5153540000f
GDC f00ff0000024c49564d4659574147435000ff000000ff0004014445484b5
GDC 20000ff00ff0000024e5153540000ff00ff8000034c49564d46595700ff0
GDC 00000ff0004414700ff0000008000080144450000ff00ff000002484b520
GDC 0ffffffff0000034e510000ff00ff800004535400ffffffff8000054c495
GDC 600ff000000ff000646595700ffffff00ff0007414700ff0000008000084
GDC d4300ffffff008000000000656d6d61000a54524d445f465241544e00545
GDC 24d445f46524154540054524d445f415a4f53450054524d445f4d4554464
GDC b0054524d445f45434f4c490054524d445f4e49544f430054524d445f505
GDC 34541370054524d445f50534546350054524d445f41434941440054524d4
GDC 45f505359415200Affffff80808000A0302b3A0000000000005940000000
GDC 00000054400000000000004e4000CAAB00000000ff800302014445484b52
GDC 4e5153540000ff00ff0000024c49564d4659574147435000ff000000ff00
GDC 04014445484b520000ff00ff0000024e5153540000ff00ff8000034c4956
GDC 4d46595700ff000000ff0004414700ff0000008000080144450000ff00ff
GDC 000002484b5200ffffffff0000034e510000ff00ff800004535400ffffff
GDC ff8000054c495600ff000000ff000646595700ffffff00ff0007414700ff
GDC 0000008000084d4300ffffff0080000000006d7573636c65000a6d54524d
GDC 445f4143494144006d54524d445f5053594152006d54524d445f46524154
GDC 4e006d54524d445f4652415454006d54524d445f4e49544f43006d54524d
GDC 445f45434f4c49006d54524d445f5053454137006d54524d445f50534546
GDC 35006d54524d445f415a4f5345006d54524d445f4d4554464b00Affffff8
GDC 0808000A
Gene1.msf MSF: 277 Type: P May 4, 2008 16:10 Check: 8413 ..

Name: TRMD_FRATN Len: 277 Check: 7278 Weight: 1.00
Name: TRMD_FRATT Len: 277 Check: 7908 Weight: 1.00
Name: TRMD_AZOSE Len: 277 Check: 8961 Weight: 1.00
Name: TRMD_METFK Len: 277 Check: 7798 Weight: 1.00
Name: TRMD_ECOLI Len: 277 Check: 9555 Weight: 1.00
Name: TRMD_NITOC Len: 277 Check: 6708 Weight: 1.00
Name: TRMD_PSEA7 Len: 277 Check: 4129 Weight: 1.00
Name: TRMD_PSEF5 Len: 277 Check: 2626 Weight: 1.00
Name: TRMD_ACIAD Len: 277 Check: 2196 Weight: 1.00
Name: TRMD_PSYAR Len: 277 Check: 8570 Weight: 1.00
Name: mTRMD_ACIAD Len: 277 Check: 1245 Weight: 1.00
Name: mTRMD_PSYAR Len: 277 Check: 7681 Weight: 1.00
Name: mTRMD_FRATN Len: 277 Check: 6978 Weight: 1.00
Name: mTRMD_FRATT Len: 277 Check: 7615 Weight: 1.00
Name: mTRMD_NITOC Len: 277 Check: 6623 Weight: 1.00
Name: mTRMD_ECOLI Len: 277 Check: 8838 Weight: 1.00
Name: mTRMD_PSEA7 Len: 277 Check: 4222 Weight: 1.00
Name: mTRMD_PSEF5 Len: 277 Check: 2736 Weight: 1.00
Name: mTRMD_AZOSE Len: 277 Check: 8917 Weight: 1.00
Name: mTRMD_METFK Len: 277 Check: 7829 Weight: 1.00

//

1 50
TRMD_FRATN .......... ..MKFGIISI FPEMFKAIND FGVTARAIKD SKVSISCFNP
TRMD_FRATT .......... MKMKFGIISI FPEMFKAIND FGVTARAIKD SKVSISCFNP
TRMD_AZOSE .....MNTPA AARRFDVITL FPEMFAALTA SGITRRALER GLYEIAFHSP
TRMD_METFK MSEASHLQER CARQFDVVTL FPEMFDALTK FGISARAQER GIYELALWNP
TRMD_ECOLI .......... ..MWIGIISL FPEMFRAITD YGVTGRAVKN GLLSIQSWSP
TRMD_NITOC .......... ..MRFGVITL FPGMFDALWD SGVVGRALKQ GKISLNFWNP
TRMD_PSEA7 ........MD KRLWVGVVSI FPEMFRAISD YGITSRAVKQ GLLTLTCWNP
TRMD_PSEF5 .........M ANLRVEVISL FPEMFSAISE YGITSRAVKQ GLLQLTCWNP
TRMD_ACIAD .......... ..MFFAVITL FPEMFEAITA YGISGRATKR QIATVSCINP
TRMD_PSYAR .......... ..MYFAVISI FPEMFATIRE FGITGRAVAQ KQVTIECINP
mTRMD_ACIAD .......... ..MFFAVITL FPEMFEAITA YGISGRATKR QIATVSCINP
mTRMD_PSYAR .......... ..MYFAVISI FPEMFATIRE FGITGRAVAQ KQVTIECINP
mTRMD_FRATN .......... ..MKFGIISI FPEMFKAIND FGVTARAIKD SKVSISCFNP
mTRMD_FRATT .......... MKMKFGIISI FPEMFKAIND FGVTARAIKD SKVSISCFNP
mTRMD_NITOC .......... ..MRFGVITL FPGMFDALWD SGVVGRALKQ GKISLNFWNP
mTRMD_ECOLI .......... ..MWIGIISL FPEMFRAITD YGVTGRAVKN GLLSIQSWSP
mTRMD_PSEA7 ........MD KRLWVGVVSI FPEMFRAISD YGITSRAVKQ GLLTLTCWNP
mTRMD_PSEF5 .........M ANLRVEVISL FPEMFSAISE YGITSRAVKQ GLLQLTCWNP
mTRMD_AZOSE .....MNTPA AARRFDVITL FPEMFAALTA SGITRRALER GLYEIAFHSP
mTRMD_METFK MSEASHLQER CARQFDVVTL FPEMFDALTK FGISARAQER GIYELALWNP

51 100
TRMD_FRATN RDYTTDRHAT VDDTSFGGGA GMVMKYQPLS AAIEDAKNTL G........C
TRMD_FRATT RDYTTDRHAT VDDTSFGGGA GMVMKYQPLS AAIEDAKNTL G........C
TRMD_AZOSE RDFVSDPHRT VDDRPYGGGP GMVMLAEPLE KAIGRAKTAQ EQALG....A
TRMD_METFK RDFTTDNYRT IDDRPYGGGP GMVMLAEPLE KAIAAAKVRQ QSRGV....E
TRMD_ECOLI RDFTHDRHRT VDDRPYGGGP GMLMMVQPLR DAIHAAKAAA G........E
TRMD_NITOC RDFAHDRHRT VDARPYGGGP GMVMGIQPLR DAIHVGRAEL G........K
TRMD_PSEA7 RDYTEDRHQT VDDRPFGGGP GMVMKIKPLE GALADARQAA GG.......R
TRMD_PSEF5 RDYTTDRHHT VDDRPFGGGP GMVMKIKPLE DALVQARNAA G........E
TRMD_ACIAD RDFAEGNYKR VDERPFGGGP GMVMMAEPLA KAIIHAKQLA EQAGC....V
TRMD_PSYAR RDYTSDNYRR IDERPYGGGP GMVMMAEPLS QAIEDARLRA SQYGCRVDKA
mTRMD_ACIAD RDFAEGNYKR VDERPFGGGP GMVMMAEPLA KAIIHAKQLA EQA.GC....
mTRMD_PSYAR RDYTSDNYRR IDERPYGGGP GMVMMAEPLS QAIEDARLRA SQY.GCRVDK
mTRMD_FRATN RDYTTDRHAT VDDTSFGGGA GMVMKYQPLS AAIEDAK... NTL.GC....
mTRMD_FRATT RDYTTDRHAT VDDTSFGGGA GMVMKYQPLS AAIEDAK... NTL.GC....
mTRMD_NITOC RDFAHDRHRT VDARPYGGGP GMVMGIQPLR DAIHVGR... AEL.GK....
mTRMD_ECOLI RDFTHDRHRT VDDRPYGGGP GMLMMVQPLR DAIHAAK... AAA.GE....
mTRMD_PSEA7 RDYTEDRHQT VDDRPFGGGP GMVMKIKPLE GALADAR... QAAGGR....
mTRMD_PSEF5 RDYTTDRHHT VDDRPFGGGP GMVMKIKPLE DALVQAR... NAA.GE....
mTRMD_AZOSE RDFVSDPHRT VDDRPYGGGP GMVMLAEPLE KAIGRAKTAQ EQALGA....
mTRMD_METFK RDFTTDNYRT IDDRPYGGGP GMVMLAEPLE KAIAAAKVRQ QSR.GV....

101 150
TRMD_FRATN GTKVVYLSPQ GSIFNHRKAQ ELLQNDSLIL LCGRYEGVDE RLIQDYVDEE
TRMD_FRATT GTKVVYLSPQ GSIFNHRKAQ ELLQNDSLIL LCGRYEGVDE RLIQDYVDEE
TRMD_AZOSE AGRVIYLSPQ GRPLDHAKVV EMTALPALTL LCGRYEGVDQ RLIDRCVDEE
TRMD_METFK NPRVIHLSPQ GVPLKHEHVM QLKDVPGLIL LASRYEGVDE RLLSTLVDEE
TRMD_ECOLI GAKVIYLSPQ GRKLDQAGVS ELATNQKLIL VCGRYEGIDE RVIQTEIDEE
TRMD_NITOC GCRVLYLSPQ GRRLDQAGLE ALASNESLLF VAGRYEGVDE RLIEMEVDEE
TRMD_PSEA7 KAKVIYLSPQ GRQLTQAGVR ELAEEEALIL IAGRYEGIDE RFIEEHVDEE
TRMD_PSEF5 GAKVIYLSPQ GRQLNQSAVR ELANEDALIL IAGRYEGIDE RFIDAHVDEE
TRMD_ACIAD HAPVVYMSPQ GKTLNEHAVQ QFVDYDGLIV LCGRYEGVDE RLIQHYVDQE
TRMD_PSYAR HCPVIYMSPQ GQTLSESSVV DMTEYDGMII LCGRYEGIDE RLLSQYVDME
mTRMD_ACIAD VHAPVVYMSP QGKTLNEHAV QQFVDYDGLI VLCGRYEGVD ERLIQHYVDQ
mTRMD_PSYAR AHCPVIYMSP QGQTLSESSV VDMTEYDGMI ILCGRYEGID ERLLSQYVDM
mTRMD_FRATN .GTKVVYLSP QGSIFNHRKA QELLQNDSLI LLCGRYEGVD ERLIQDYVDE
mTRMD_FRATT .GTKVVYLSP QGSIFNHRKA QELLQNDSLI LLCGRYEGVD ERLIQDYVDE
mTRMD_NITOC .GCRVLYLSP QGRRLDQAGL EALASNESLL FVAGRYEGVD ERLIEMEVDE
mTRMD_ECOLI .GAKVIYLSP QGRKLDQAGV SELATNQKLI LVCGRYEGID ERVIQTEIDE
mTRMD_PSEA7 .KAKVIYLSP QGRQLTQAGV RELAEEEALI LIAGRYEGID ERFIEEHVDE
mTRMD_PSEF5 .GAKVIYLSP QGRQLNQSAV RELANEDALI LIAGRYEGID ERFIDAHVDE
mTRMD_AZOSE .AGRVIYLSP QGRPLDHAKV VEMTALPALT LLCGRYEGVD QRLIDRCVDE
mTRMD_METFK ENPRVIHLSP QGVPLKHEHV MQLKDVPGLI LLASRYEGVD ERLLSTLVDE

151 200
TRMD_FRATN ISVGDFVLSG GELPAMLVMD SLIRLIPEVL GNKESVIEDS FYDGLLDYPH
TRMD_FRATT ISVGDFVLSG GELPAMLVMD SLIRLLPEVL GNKESVVEDS FYDGLLDYPH
TRMD_AZOSE LSLGDFVLSG GELPAMVLLD AIVRQLPGAL NDADSAQEDS FVDGLLDCPH
TRMD_METFK YSIGDYVLSG GEIPAMAILD AIIRQLPGSL GDAGSAEEDS FADGLLDCPH
TRMD_ECOLI WSIGDYVLSG GELPAMTLID SVSRFIPGVL GHEASATEDS FAEGLLDCPH
TRMD_NITOC WSIGDYVLSG GELAAMVIID GLARLLPGVL GAAESAQQDS FVNGLLDCPH
TRMD_PSEA7 WSIGDYVLSG GELPAMVLVD AVTRLLPGAL GHADSAEEDS FTDGLLDCPH
TRMD_PSEF5 WSIGDYVLSG GELPAMVLID AVTRLLPGAL GHVDSAEEDS FTDGLLDCPH
TRMD_ACIAD WSIGDYVLSG GELPAMVLLD SIIRRLPDAM SDEQSHIQDS FVDGLLDCPQ
TRMD_PSYAR ISLGDYVLTG GELPAMVLMD SVIRRLPNIM GDDKSAEQDS FVDGLLDCPH
mTRMD_ACIAD EWSIGDYVLS GGELPAMVLL DSIIRRLPDA MSDEQSHIQD SFVDGLLDCP
mTRMD_PSYAR EISLGDYVLT GGELPAMVLM DSVIRRLPNI MGDDKSAEQD SFVDGLLDCP
mTRMD_FRATN EISVGDFVLS GGELPAMLVM DSLIRLIPEV LGNKESVIED SFYDGLLDYP
mTRMD_FRATT EISVGDFVLS GGELPAMLVM DSLIRLLPEV LGNKESVVED SFYDGLLDYP
mTRMD_NITOC EWSIGDYVLS GGELAAMVII DGLARLLPGV LGAAESAQQD SFVNGLLDCP
mTRMD_ECOLI EWSIGDYVLS GGELPAMTLI DSVSRFIPGV LGHEASATED SFAEGLLDCP
mTRMD_PSEA7 EWSIGDYVLS GGELPAMVLV DAVTRLLPGA LGHADSAEED SFTDGLLDCP
mTRMD_PSEF5 EWSIGDYVLS GGELPAMVLI DAVTRLLPGA LGHVDSAEED SFTDGLLDCP
mTRMD_AZOSE ELSLGDFVLS GGELPAMVLL DAIVRQLPGA LNDADSAQED SFVDGLLDCP
mTRMD_METFK EYSIGDYVLS GGEIPAMAIL DAIIRQLPGS LGDAGSAEED SFADGLLDCP

201 250
TRMD_FRATN YTKPAVLPNG NAVPGVLLSG NHKEIAKWRR KQKLIRTYER RKDLIECLCL
TRMD_FRATT YTKPAVLPNG NAVPDVLLSG NHKEIAKWRR KQKLIRTYER RKDLIECLCL
TRMD_AZOSE YTRPEIYAG. ERVPQVLLSG NHAAIRRWRL KQALGTTWRR RPDLLQGRTL
TRMD_METFK YTRPEVYAG. QKVPEVLLSG NHAKIKRWRL KQSLARTRAR RPDLLAARPL
TRMD_ECOLI YTRPEVLEG. MEVPPVLLSG NHAEIRRWRL KQSLGRTWLR RPELLENLAL
TRMD_NITOC YTRPEVIEG. YRVPPVLLSG DHKAIRRWRL KQALGRTWLK RPDLLSRRIL
TRMD_PSEA7 YTRPEVYAD. KRVPEVLLSG NHEHIRRWRL QQALGRTWER RADLLDSRSL
TRMD_PSEF5 YTRPEVYAD. QRVPDVLLSG NHAHIRRWRL QQSLGRTYER RADLLESRSL
TRMD_ACIAD YTKPDHFEG. LDVPEVLKSG HHANIEKWRF LQRYQRTLDR RPELVEKVTL
TRMD_PSYAR YTKPHEFAG. MAVPEVLLSG HHANIAQWRF RQQVERTQTR RPDLWQAFMP
mTRMD_ACIAD QYTKPDHF.E GLDVPEVLKS GHHANIEKWR FLQRYQRTLD RRPELVEKVT
mTRMD_PSYAR HYTKPHEF.A GMAVPEVLLS GHHANIAQWR FRQQVERTQT RRPDLWQAFM
mTRMD_FRATN HYTKPAVLPN GNAVPGVLLS GNHKEIAKWR RKQKLIRTYE RRKDLIECLC
mTRMD_FRATT HYTKPAVLPN GNAVPDVLLS GNHKEIAKWR RKQKLIRTYE RRKDLIECLC
mTRMD_NITOC HYTRPEVI.E GYRVPPVLLS GDHKAIRRWR LKQALGRTWL KRPDLLSRRI
mTRMD_ECOLI HYTRPEVL.E GMEVPPVLLS GNHAEIRRWR LKQSLGRTWL RRPELLENLA
mTRMD_PSEA7 HYTRPEVY.A DKRVPEVLLS GNHEHIRRWR LQQALGRTWE RRADLLDSRS
mTRMD_PSEF5 HYTRPEVY.A DQRVPDVLLS GNHAHIRRWR LQQSLGRTYE RRADLLESRS
mTRMD_AZOSE HYTRPEIY.A GERVPQVLLS GNHAAIRRWR LKQALGTTWR RRPDLLQGRT
mTRMD_METFK HYTRPEVY.A GQKVPEVLLS GNHAKIKRWR LKQSLARTRA RRPDLLAARP

251 277
TRMD_FRATN SAQDKQILDD YKIDKVSTKG EE.....
TRMD_FRATT SAKDKQILDD YKIDKVSTKG EE.....
TRMD_AZOSE SKEELSLLGE FRHEQEGVEG DIA....
TRMD_METFK TKEESRLLME IEQEQDSHN. .......
TRMD_ECOLI TEEQARLLAE FKTEHAQQQH KHDGMA.
TRMD_NITOC DLEQQHLLAE FIREYQAEHR EPR....
TRMD_PSEA7 SGEEQKLLAE YIRQRDDS.. .......
TRMD_PSEF5 SGEEKKLLEE YLRERDDS.. .......
TRMD_ACIAD TKQQRKWLTF LDDSKN.... .......
TRMD_PSYAR TVEQAKWLKA LAKADKK... .......
mTRMD_ACIAD LTKQQRKWLT FLDDSKN... .......
mTRMD_PSYAR PTVEQAKWLK ALAKADKK.. .......
mTRMD_FRATN LSAQDKQILD DYKIDKVSTK GEE....
mTRMD_FRATT LSAKDKQILD DYKIDKVSTK GEE....
mTRMD_NITOC LDLEQQHLLA EFIREYQAEH REPR...
mTRMD_ECOLI LTEEQARLLA EFKTEHAQQQ HKHDGMA
mTRMD_PSEA7 LSGEEQKLLA EYIRQRDDS. .......
mTRMD_PSEF5 LSGEEKKLLE EYLRERDDS. .......
mTRMD_AZOSE LSKEELSLLG EFRHEQEGVE GDIA...
mTRMD_METFK LTKEESRLLM EIEQEQDSHN .......