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Header
Program needle
Rundate Fri Mar 30 2007 20:58:13
Align format srspair
Report file temp_job2.needlep
Results
#=======================================
#
# Aligned_sequences: 2
# 1: PYRD_HUMAN
# 2: PYRD_METJA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 311
# Identity: 90/311 (28.9%)
# Similarity: 156/311 (50.2%)
# Gaps: 35/311 (11.3%)
# Score: 288.5
#
#
#=======================================
PYRD_HUMAN 1 MLEVRVLGHKFRNPVGIAAG-FDKHGEAVDGLYKMGFGFVEIGSVTPKPQ 49
||:..:.|.:|:|||.:|:| ..:.|.|:..:.|.|.|.|...|:...|.
PYRD_METJA 1 MLKTNICGIEFKNPVFLASGIMGETGSALKRIAKGGAGAVTTKSIGLNPN 50
PYRD_HUMAN 50 EGNPRPRVFRLPEDQAVINRYG--FNSHGL--SVVEHRLRARQQKQAKLT 95
.|:..| .::..|| .|:.|| ..|:..|...::.:.:|.
PYRD_METJA 51 PGHKNP---------TIVEVYGGFLNAMGLPNPGVDEYLEEIEKVRDELN 91
PYRD_HUMAN 96 E-DGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGL 144
. |...:|...||:: |::||..:.:....|.:.:|:|.|:..|.
PYRD_METJA 92 RMDVRIIGSIYGKDE------EEFAEVAKKMERYVDIIELNISCPHAKGY 135
PYRD_HUMAN 145 RSLQGK-AELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIAS 193
.:..|: .:|...:.|.:: :.|..| |..|:.|::| |..:||.
PYRD_METJA 136 GATIGQNPDLSYDVCKAVK-----KAVKIP-VFAKLTPNVT--DIIEIAQ 177
PYRD_HUMAN 194 VVKELGIDGLIVTNTTVSRPAGLQG---ALRSETGGLSGKPLRDLSTQTI 240
.|.:.|:|||:..||.......::. .|.::.||||||.::.:..:.:
PYRD_METJA 178 AVVDAGVDGLVAINTVRGMAIDIRAKKPILANKFGGLSGKAIKSIGIKVV 227
PYRD_HUMAN 241 REMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVV 290
.::| ....||||||||:.||:||:|.:.||||.||:.:.:.:.|..:.
PYRD_METJA 228 WDLY--ENFDVPIIGVGGIMSGEDAIEYMMAGASAVQIGSGVYYRGYDIF 275
PYRD_HUMAN 291 GKVKRELEALL 301
.||..|:.:.|
PYRD_METJA 276 KKVCDEIISFL 286
Additional Information