Документ взят из кэша поисковой машины. Адрес оригинального документа : http://kodomo.cmm.msu.ru/~plazmoliz/Term2/all_emma.msf Дата изменения: Thu Apr 10 23:02:47 2008 Дата индексирования: Tue Oct 2 11:49:07 2012 Кодировка:

!!AA_MULTIPLE_ALIGNMENT 1.0

all_emma.msf MSF: 370 Type: P 10/04/08 CompCheck: 628 ..

Name: PYRD_ECOLI Len: 370 Check: 947 Weight: 10.90
Name: PYRD_BUCAP Len: 370 Check: 5426 Weight: 14.70
Name: PYRD_PSEA6 Len: 370 Check: 9951 Weight: 13.60
Name: PYRD_SHEFN Len: 370 Check: 4177 Weight: 8.70
Name: PYRD_SHESA Len: 370 Check: 576 Weight: 8.70
Name: PYRD_BURP0 Len: 370 Check: 1991 Weight: 12.50
Name: PYRD_RHIME Len: 370 Check: 1730 Weight: 15.30
Name: PYRD_ANADF Len: 370 Check: 5830 Weight: 15.30

//

1 50
PYRD_ECOLI ~~~MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPFEALVRQKVPAKPV
PYRD_BUCAP ~~~MFYYLIRKLLFLIDPEKAHTLVLMYLNSKKIQILRKIFIKPIPLKQI
PYRD_PSEA6 ~~~~MYAILQKFLFTQDAEWSHDFTINWLKRTQHNFLNVAYKQHIDDKPV
PYRD_SHEFN ~~~MFYKLAQKVMFQMDPELAHNIAIGSLKMTGNNLLNCFYRQQVKSSPV
PYRD_SHESA ~~~MFYKIAQKVMFQMDPERAHNLAIGSLKMTGNSPLNAFYAQNIAPAPV
PYRD_BURP0 MFSSLYPLARASLFKMDAEDAHHLTLRMLGAAGRTGLACALSPRVPDAPR
PYRD_RHIME MIGQLEHLARRGLFLFDPEAAHGLSIKALKSG...LVPSCAAPADPRLGQ
PYRD_ANADF ~~~MIWPALRWTLFHLDPERAHRLAHGALHRVPPGLARLRRPAVPPELRV

51 100
PYRD_ECOLI NCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDK
PYRD_BUCAP KCMGLTFNNKIGLAAGMDKNGDYIDSLSKIGFGFIEVGTVTPLPQYGNPK
PYRD_PSEA6 EFLGITFKNPVGLAAGLDKNAECIDAFAAMGFGFIEVGTVTPKAQAGNDK
PYRD_SHEFN TCMGLTFPNPVGLAAGLDKDGESIDAFHAMGFGHVEVGTVTPRPQAGNDQ
PYRD_SHESA SFMGLTFPNPVGLAAGMDKDGESIDAFHAMGFGHVEVGTVTPRPQPGNDL
PYRD_BURP0 TVMGLSFRNPVGLAAGLDKDGAAIDGFAALGFGFIEVGTVTPRAQPGNPR
PYRD_RHIME TVAGLVFSNPIGMAAGYDKNAEVPEALLKIGFGFTEIGTVTPRPQAGNDK
PYRD_ANADF SCLGLDFDGPIGLAAGFDKGDASIAGLFALGFSHVEIGTITPRPQAGNEP

101 150
PYRD_ECOLI PRLFRLVDAEGLINRMGFNNLGVDNLVENVK...KAHYDGVLGINIGKNK
PYRD_BUCAP PRIFRVPSIEGIINRMGFNNLGIDYLVNNVK...KSKFKGIIGINIGKNK
PYRD_PSEA6 PRMFRLPAGQAIINRMGFNNKGVDYLVEQVK...QAKYKGVLGINIGKNK
PYRD_SHEFN PRLFRLKPAKGIINRMGFNNKGVDNLVRNLM...AKKSDIMVGVNIGKNK
PYRD_SHESA PRLFRLKPAKAIINRMGFNNKGVDNLVKNLI...AKKTDIMVGVNIGKNK
PYRD_BURP0 PRMFRLPEADAIINRMGFNNSGVDQFVKNVQ...AARYRGVLGLNIGKNA
PYRD_RHIME PRLFRLVEDEAVINRLGFNNEGHGAALARLK...ACSREALIGVNIGANK
PYRD_ANADF PRLFRLVEHRALVNRMGFNNAGAEVCARRLAGVPATARMGPVGVNVGKNK

151 200
PYRD_ECOLI DTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLL
PYRD_BUCAP DTKIEDAIKDYLICIEKIYFYASYIAINISSPNTINLRKLQYGILFENLL
PYRD_PSEA6 TTPEDEALNDYLICLRKVYAHASYVTVNISSPNTPGLRNLQYGDALTQLL
PYRD_SHEFN DTPVEQGKDDYLICMEKVYQYASYIAVNISSPNTPGLRSMQYGELLDDLL
PYRD_SHESA DTPVEQGKDDYLICMDKVYPYAAYIAVNISSPNTPGLRSLQYGDLLDELL
PYRD_BURP0 DTPIERAADDYLYCLERVYPFASYVTINISSPNTKNLRQLQGAGELDALL
PYRD_RHIME DS..ADRIADYVTGIRTFYAVARYFTANISSPNTPGLRDLQARESLSALL
PYRD_ANADF TTPNEDAAADYLACIDRLHPYADYLVVNISSPNTPGLRQLQERDQLDALL

201 250
PYRD_ECOLI TAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIA
PYRD_BUCAP RDIKKKQSEMHSKYSKYVPIVIKISPDLSKKELIHISNKLIHYKIDGVIA
PYRD_PSEA6 EGLKEEQANLEVKHNKRVPILIKIAPDLEDSELDSMVDSFLTVGIDGVIA
PYRD_SHEFN SSIKAKQTELAAKHGKYVPVALKIAPDLTSEEISAIADSLMSNQFDGVIA
PYRD_SHESA SALKTKQLELAEKHKKYVPIALKIAPDLTTEEIENIAQSLIKNKFDGAIA
PYRD_BURP0 AALKDKQRRLADLHGKLVPLALKIAPDLDDEQVKEIAATLLRHDIEGVIA
PYRD_RHIME SAVLAARDDEARKGGRQVPVFLKIAPDLTEEGMDDIAAEVLAHGLDGLIV
PYRD_ANADF RACAGRLRERAPGK....PLLVKLAPDLSPTALDEAVDVAIDAGVSGIVA

251 300
PYRD_ECOLI TNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIG
PYRD_BUCAP TNTTLDHSSIPKIKNNKEEGGLSGLPLQKKSNDVISILYKNLKRKIPIIG
PYRD_PSEA6 TNTTLDRDRVKGQEHAEEAGGLSGSVLTDKSQQIVSSLCTKLAGNVPVIG
PYRD_SHEFN TNTTLSRDTVTDLKHAEEMGGLSGKPLADLSTQVIKQLAICLQGKIPIIG
PYRD_SHESA TNTTLTRDGVSGLANANESGGLSGKPLTELSTKVIKQLATGLNGQIPIIG
PYRD_BURP0 TNTTLSREAVKGLPHADEAGGLSGRPVFDASNAVIRKLRAELGDAVPIIG
PYRD_RHIME SNTTLSREGLKDRRQANEAGGLSGKPLFEKSTAVLARMRKRVGPHLPIIG
PYRD_ANADF TNTTLSRAGVERHPRAREAGGLSGAPLEALATSVVRRCYIRAAGRVPIVG

301 350
PYRD_ECOLI VGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVTHI~~~~~~~~
PYRD_BUCAP VGGINSINSAREKIMCGANLIQVYSGLIYHGPNFIREIIRNL~~~~~~~~
PYRD_PSEA6 VGGIDSPHAAKARIEAGSPLIQVYSALIYQGPKLIKEIVDSL~~~~~~~~
PYRD_SHEFN VGGINSAADALAKFDAGSTMVQIYSGFIYQGPKLVDQIARAYCAK~~~~~
PYRD_SHESA VGGINSAEDALAKFDAGATMVQIYSGFIYQGPKLIKEIVEAYRLK~~~~~
PYRD_BURP0 VGGIFSGEDARAKLAAGAALVQLYTGFIYRGPALVAECVKAIARG~~~~~
PYRD_RHIME VGGVCSAETAAEKIRAGADLVQLYSCMIYEGPGLPGRIVRGLSALCEREK
PYRD_ANADF CGGVMNAEGAYAKIRAGATLVQVYTGLVYGGPGFVRRLNDGLARLLARDG

351 370
PYRD_ECOLI ~~~~~~~~~~~~~~~~~~~~
PYRD_BUCAP ~~~~~~~~~~~~~~~~~~~~
PYRD_PSEA6 ~~~~~~~~~~~~~~~~~~~~
PYRD_SHEFN ~~~~~~~~~~~~~~~~~~~~
PYRD_SHESA ~~~~~~~~~~~~~~~~~~~~
PYRD_BURP0 ~~~~~~~~~~~~~~~~~~~~
PYRD_RHIME LASIRDIRDSRLDYWSGRNV
PYRD_ANADF FRTVAEAVGADVETAERAGV