allpy
annotate NEWS @ 951:b520e79fd1f4
blocks3d-wt: add an example of an alignment for input for the program
| author | Boris Nagaev <bnagaev@gmail.com> |
|---|---|
| date | Thu, 15 Dec 2011 12:31:07 +0300 |
| parents | da46b25fd67d |
| children | b8f1c216bca8 |
| rev | line source |
|---|---|
| dendik@848 | 1 1.4.1 |
| dendik@848 | 2 |
| dendik@848 | 3 This is a code cleanup release. |
| dendik@848 | 4 Nothing should change in the interface or behaviour at all. |
| dendik@848 | 5 |
| dendik@848 | 6 1.4.0 (2011-07-20) |
| dendik@624 | 7 |
| dendik@697 | 8 * new: Alignments, Sequences and Blocks now can have Markups, see the wiki |
| dendik@717 | 9 * new: File format 'markup' for storing alignment with arbitrary markups |
| dendik@633 | 10 * new: processor allpy.processors.Needle() |
| dendik@633 | 11 * new: method allpy.base.Alignment.rows_as_strings() |
| dendik@650 | 12 * new: method allpy.base.Alignment.row_as_list(sequence) |
| dendik@650 | 13 * new: method allpy.base.Alignment.row_as_string(sequence) |
| dendik@657 | 14 * new: columns_as_lists() returns list of lists, each has 'column' attribute |
| dendik@662 | 15 * new: javascript viewer colors columns by conservedness |
| dendik@624 | 16 |
| dendik@602 | 17 1.3.0 (2011-04-15) |
| dendik@602 | 18 |
| dendik@602 | 19 * new: started NEWS file |
| dendik@602 | 20 * new: started tracking version numbers |