allpy
annotate NEWS @ 666:d9a3e99ae19b
blocks3d/www: mark conservative columns inside blocks
Previously letters were marked if column is conservative over all
sequences of alignment. Currently it was changed to conservatism
over block including this letter.
Additional attribute storing conservatism of columns inside block
was added to block. This caused all colors of blocks to be changed.
| author | boris <bnagaev@gmail.com> |
|---|---|
| date | Fri, 01 Jul 2011 03:21:08 +0400 |
| parents | 1c2f88eedb18 |
| children | dcb78a91e981 |
| rev | line source |
|---|---|
| dendik@624 | 1 1.3.1 |
| dendik@624 | 2 |
| dendik@633 | 3 * new: processor allpy.processors.Needle() |
| dendik@633 | 4 * new: method allpy.base.Alignment.rows_as_strings() |
| dendik@650 | 5 * new: method allpy.base.Alignment.row_as_list(sequence) |
| dendik@650 | 6 * new: method allpy.base.Alignment.row_as_string(sequence) |
| dendik@657 | 7 * new: columns_as_lists() returns list of lists, each has 'column' attribute |
| dendik@662 | 8 * new: javascript viewer colors columns by conservedness |
| dendik@624 | 9 |
| dendik@602 | 10 1.3.0 (2011-04-15) |
| dendik@602 | 11 |
| dendik@602 | 12 * new: started NEWS file |
| dendik@602 | 13 * new: started tracking version numbers |