Документ взят из кэша поисковой машины. Адрес оригинального документа : http://kodomo.fbb.msu.ru/hg/allpy/annotate/835efa2a8c71/.hgignore
Дата изменения: Unknown
Дата индексирования: Tue Feb 26 17:59:55 2013
Кодировка:
allpy: .hgignore annotate

allpy

annotate .hgignore @ 817:835efa2a8c71

optimization of rasmol_homology: keep structure loaded of two sequences only One of steps of this program is superimposition of all sequences with main sequence and saving of all structures to pdb file. Loaded structure of all sequences is not needed to do this. At every moment only structure of main sequence and of superimposing sequence. This optimization results in essential memory saving. Output files should be the same to previous revision. To implement this optimization methods supeimpose and save_pdb of alignment were replaced with methods with same names of sequence. So some code is same as code of methods of alignment. Note: behaves as before, with superimpose and save_pdb methods of alignment. Model was returned by these methods but never used while generating spt script. This can result in collisions of rasmol selections when number of sequences is greater than max number of chains of one model.
author boris (kodomo) <bnagaev@gmail.com>
date Fri, 15 Jul 2011 02:23:27 +0400
parents cf1657b94c96
children 813679b6c514
rev   line source
dendik@10 1 syntax: glob
me@198 2
me@198 3 # Compiler-generated junk
dendik@10 4 *.pyc
bnagaev@61 5 build
bnagaev@489 6 output
dendik@486 7 *.o
dendik@486 8 blocks3d/wt/blocks3d-wt
dendik@486 9 debian/.dep
dendik@625 10 .coverage
me@198 11
me@198 12 # Junk from text-editors
bnagaev@61 13 *.geany
bnagaev@181 14 *.swp
me@198 15
dendik@535 16 # Hand-generated temporary files
dendik@535 17 temp
dendik@535 18 temp.*
dendik@535 19
dendik@534 20 # Temporary files from building
dendik@534 21 allpy/data/components.cif
bnagaev@658 22 blocks3d/www/input/conservative_groups.js
dendik@534 23
me@254 24 # Temporary files from sphinx
me@254 25 docs/build
me@254 26
me@198 27 # Temporary files from debianization
me@198 28 debian/python-allpy/
dendik@486 29 debian/blocks3d/
dendik@486 30 debian/blocks3d-wt/
dendik@609 31 debian/geometrical-core2/
dendik@486 32
dendik@607 33 debian/bin/
me@198 34 debian/*.substvars
me@198 35 debian/*.debhelper*
me@198 36 debian/*stamp*
me@198 37 debian/files
me@198 38 debian/control
me@198 39 debian/*.log
me@198 40 debian/*/*.log
me@198 41 debian/tmp/
me@198 42 debian/pycompat
me@198 43 *.deb
me@198 44 *.cdbs-config_list