Документ взят из кэша поисковой машины. Адрес оригинального документа : http://kodomo.fbb.msu.ru/hg/allpy/file/19ffcf1ac4a0/test/Makefile
Дата изменения: Unknown
Дата индексирования: Sun Feb 3 20:57:51 2013
Кодировка:
allpy: 19ffcf1ac4a0 test/Makefile

allpy

view test/Makefile @ 935:19ffcf1ac4a0

Fixed bug in processors: used Block class for reading alignment file. Until recent changes (introduction of Alignment/Block._append_columns) it worked out fine. But practically, we used alignment API: we created an empty object and called append_file on it. For blocks this resulted in a block that did not know it's alignment. Recent changes in implementation caused blocks to actually have their own specific methods besides constructor, and these methods use knowlege of alignment a block belongs to. Hence, the previous behaviour was a bug.
author Daniil Alexeyevsky <dendik@kodomo.fbb.msu.ru>
date Mon, 28 Nov 2011 18:33:25 +0300
parents bf873e4054c2
children bba00d474c02
line source
1 all:
2 $(MAKE) -C .. tests
4 alignments:
5 wget -O - http://www.rcsb.org/pdb/files/fasta.txt?structureIdList=1JCC | head --lines 2 > ex1.fasta
6 wget -O - http://www.rcsb.org/pdb/files/fasta.txt?structureIdList=1KFM | head --lines 2 >> ex1.fasta