Документ взят из кэша поисковой машины. Адрес оригинального документа : http://kodomo.fbb.msu.ru/hg/allpy/file/19ffcf1ac4a0/.hgeol
Дата изменения: Unknown
Дата индексирования: Sun Feb 3 06:03:25 2013
Кодировка:
allpy: 19ffcf1ac4a0 .hgeol

allpy

view .hgeol @ 935:19ffcf1ac4a0

Fixed bug in processors: used Block class for reading alignment file. Until recent changes (introduction of Alignment/Block._append_columns) it worked out fine. But practically, we used alignment API: we created an empty object and called append_file on it. For blocks this resulted in a block that did not know it's alignment. Recent changes in implementation caused blocks to actually have their own specific methods besides constructor, and these methods use knowlege of alignment a block belongs to. Hence, the previous behaviour was a bug.
author Daniil Alexeyevsky <dendik@kodomo.fbb.msu.ru>
date Mon, 28 Nov 2011 18:33:25 +0300
parents 61e5d8e146c7
children
line source
1 [patterns]
2 **.py = native
3 **.txt = native
4 **.html = native
5 **.css = native
6 **.js = native
7 **.fasta = native
8 **.rst = native
9 **.tcl = native
10 **.C = native
11 **.h = native
12 utils/** = native
13 debian/** = native
14 Makefile = native
15 **/Makefile = native
16 README* = native
17 **/README* = native
18 TODO = native
19 **/TODO = native
20 NEWS = native
21 **/NEWS = native
22 .hgignore = native
24 **.png = BIN
26 # XXX: all executable scripts without extensions must end up in utils/
27 # this exception must go away
28 geometrical_core/geometrical-core = native
30 # XXX: these are all parts of Boris' build system for
31 # blocks3d-wt and must go away in favour of a Makefile
32 **.sh = native
33 **.xml = native
34 **.pro = native
35 **.ini = native