allpy: 632a0708ab33 NEWS

allpy

view NEWS @ 735:632a0708ab33

blocks3d/www: allow blocks not to be continuous Changes: * javascript * blocks_to_html method of AlignmentMixin * test for blocks viewer (add one non-continuous block) Currently block can have either "start" and "end" or "positions" attribute, but not both. "start" and "end" attributes are not deprecated and can be used if blocks are known to be continuous or while writting blocks javascript by hands. close #71

author	boris <bnagaev@gmail.com>
date	Fri, 08 Jul 2011 20:21:39 +0200
parents	dcb78a91e981
children	da46b25fd67d

line source

1 1.3.1

3 * new: Alignments, Sequences and Blocks now can have Markups, see the wiki

4 * new: File format 'markup' for storing alignment with arbitrary markups

5 * new: processor allpy.processors.Needle()

6 * new: method allpy.base.Alignment.rows_as_strings()

7 * new: method allpy.base.Alignment.row_as_list(sequence)

8 * new: method allpy.base.Alignment.row_as_string(sequence)

9 * new: columns_as_lists() returns list of lists, each has 'column' attribute

10 * new: javascript viewer colors columns by conservedness

12 1.3.0 (2011-04-15)

14 * new: started NEWS file

15 * new: started tracking version numbers