allpy

changeset 227:9c7963064511
repeats: universal input format parser
author: boris <bnagaev@gmail.com>
date: Sat, 27 Nov 2010 18:47:13 +0300
parents: 54e898f96d80
children: 0ed41390408f
files: repeats/test.py
diffstat: 1 files changed, 1 insertions(+), 1 deletions(-) [+]
[-]

repeats/test.py 2 repeats/test.py 2
repeats/test.py 2
     1.1 --- a/repeats/test.py	Sat Nov 27 18:41:20 2010 +0300
     1.2 +++ b/repeats/test.py	Sat Nov 27 18:47:13 2010 +0300
     1.3 @@ -8,7 +8,7 @@
     1.4  for line in open(sys.argv[1]):
     1.5      line = line.strip()
     1.6      if line:
     1.7 -        c1, c2, from1, to1, from2, to2, ori1, ori2 = line.split()
     1.8 +        c1, c2, from1, to1, from2, to2, ori1, ori2 = line.split()[:8]
     1.9          if c1 == 'DNA_1':
    1.10              continue # first line
    1.11          ori1 = True if ori1 == '1' else False