allpy
changeset 1024:b187b16c7532
allpy/structure.py: cosmetic improvements of blocks_to_pymol()'s implementation
Wrap a value, returned by block_line(), in parentheses for more safety
| author | Boris Nagaev <bnagaev@gmail.com> |
|---|---|
| date | Thu, 15 Mar 2012 19:50:25 +0400 |
| parents | 4732047ae426 |
| children | b5a910f0980f |
| files | allpy/structure.py |
| diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
line diff
1.1 --- a/allpy/structure.py Thu Mar 15 19:47:56 2012 +0400 1.2 +++ b/allpy/structure.py Thu Mar 15 19:50:25 2012 +0400 1.3 @@ -518,7 +518,7 @@ 1.4 return "(%(pdb)s and chain %(chain)s)" % \ 1.5 {'pdb': sequence_to_pdb(s), 'chain': s.pdb_chain.get_id()} 1.6 def block_line(b, s): 1.7 - return '(resi %(resi)s) and name ca and %(seq)s' % \ 1.8 + return '((resi %(resi)s) and name ca and %(seq)s)' % \ 1.9 {'resi': ','.join(str(monomer_id(c[s])) for c in b.columns), 1.10 'seq': sequence_line(s)} 1.11 pdbs = set(sequence_to_pdb(s) for s in self.sequences)