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Документ взят из кэша поисковой машины. Адрес
оригинального документа
: http://kodomo.fbb.msu.ru/~sorochkinaa/term4/ecoli_metja.html
Дата изменения: Mon Mar 26 23:04:12 2007 Дата индексирования: Mon Oct 1 22:12:00 2012 Кодировка: |
| Header | |||
| Program | needle | ||
| Rundate | Sun Mar 25 2007 18:35:35 | ||
| Align format | srspair | ||
| Report file | temp_job3.needlep | ||
| Results | |||
#=======================================
#
# Aligned_sequences: 2
# 1: SYY_ECOLI
# 2: SYY_METJA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity: 62/351 (17.7%)
# Similarity: 113/351 (32.2%)
# Gaps: 128/351 (36.5%)
# Score: 88.5
#
#
#=======================================
SYY_ECOLI 1 RLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATG 50
..:.|.||:|:. .:||||.:.:..:...|.||...:.|:.
SYY_METJA 1 -----EKSAYIGFEPSG-KIHLGHYLQIKKMIDLQNAGFDIIILLA---- 40
SYY_ECOLI 51 LIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIAANNY 100
.|:.....:..:|:|||
SYY_METJA 41 ------------DLHAYLNQKGELDEIRK--------------------- 57
SYY_ECOLI 101 DWFGNMNVLTF----LR---------DIGKHFSVNQMINKEAVKQRLN-- 135
.|:.|...| |: .:.|.:::| :.:.|:|..|.
SYY_METJA 58 --IGDYNKKVFEAMGLKAKYVYGSEFQLDKDYTLN--VYRLALKTTLKRA 103
SYY_ECOLI 136 --------REDQGISFTEFSYNLLQGYDFACLNKQYGVVLQIGGSDQWGN 177
|||:.....|..|.::|..|...| ||.:.:||.:|
SYY_METJA 104 RRSMELIAREDENPKVAEVIYPIMQVNDIHYL----GVDVAVGGMEQ--- 146
SYY_ECOLI 178 ITSGIDLTRRLHQ-------NQVFGLTVPLITKADGT-KFGKTEGGAVWL 219
|::|. .:|..:..|::|..||. |...::|..:.:
SYY_METJA 147 --------RKIHMLARELLPKKVVCIHNPVLTGLDGEGKMSSSKGNFIAV 188
SYY_ECOLI 220 DP---------KKT---------SPYKFYQFWINTADADVYRFLKFFTFM 251
|. ||. :|......:.......:.|..||...:
SYY_METJA 189 DDSPEEIRAKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDL 238
SYY_ECOLI 252 SIEEINALEEEDKNSGKAPR-AQYVLAEQVTRLVHGEEGLQAAKRITECL 300
::.....||...||....|. .:..:||::.:::.
SYY_METJA 239 TVNSYEELESLFKNKELHPMDLKNAVAEELIKILE--------------- 273
SYY_ECOLI 301 F 301
SYY_METJA 273 - 273
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