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Документ взят из кэша поисковой машины. Адрес
оригинального документа
: http://kodomo.fbb.msu.ru/~sorochkinaa/term4/syymhuman_syyecoli.html
Дата изменения: Mon Mar 26 23:01:24 2007 Дата индексирования: Mon Oct 1 22:23:22 2012 Кодировка: |
| Header | |||
| Program | needle | ||
| Rundate | Mon Mar 26 2007 17:44:30 | ||
| Align format | srspair | ||
| Report file | temp_job2.needlep | ||
| Results | |||
#=======================================
#
# Aligned_sequences: 2
# 1: SYYM_HUMAN
# 2: SYY_ECOLI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 324
# Identity: 131/324 (40.4%)
# Similarity: 185/324 (57.1%)
# Gaps: 45/324 (13.9%)
# Score: 619.5
#
#
#=======================================
SYYM_HUMAN 1 ------QTIYCGFDPTADSLHVGHLLALLGLFHLQRAGHNVIALVGGATA 44
..:||||||||||||:|||:.||.|...|:|||..:|||||||.
SYY_ECOLI 1 RLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATG 50
SYYM_HUMAN 45 RLGDPSGRTKEREALETERVRANARALRLGL-----------EALAANHQ 83
.:||||.:..||:....|.|:.....:|..: .|:|||
SYY_ECOLI 51 LIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIAAN-- 98
SYYM_HUMAN 84 QLFTDGRSWGSFTVLDNSAWYQKQHLVDFLAAVGGHFRMGTLLSRQSVQL 133
|..|:...:::.||..:|.||.:..::::::|:.
SYY_ECOLI 99 ----------------NYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQ 132
SYYM_HUMAN 134 RL-KSPEGMSLAEFFYQVLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGY 182
|| :..:|:|..||.|.:||.|||..|.::||..:|:|||||.|||.||.
SYY_ECOLI 133 RLNREDQGISFTEFSYNLLQGYDFACLNKQYGVVLQIGGSDQWGNITSGI 182
SYYM_HUMAN 183 EFINKLTGEDVFGITVPLITSTTGAKLGKSAGNAVWLNRDKTSPFELYQF 232
:...:|....|||:||||||...|.|.||:.|.||||:..||||::.|||
SYY_ECOLI 183 DLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQF 232
SYYM_HUMAN 233 FVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPERRGPQKR----LAA 278
::...|..|.|:||.|||:.:.||:.:.: |.:..|...| ||.
SYY_ECOLI 233 WINTADADVYRFLKFFTFMSIEEINALEE----EDKNSGKAPRAQYVLAE 278
SYYM_HUMAN 279 EVTKLVHGREGLDSAKRCTQALYH 302
:||:||||.|||.:|||.|:.|:
SYY_ECOLI 279 QVTRLVHGEEGLQAAKRITECLF- 301
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