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Basic query

General options
1st alignment	Title		2nd alignment
Comparison Picture Options
Picture size width height	Offset color scale 1 - Max Min - Max	Picture types Offsets comparison Column values comparison Col. values comparison 2	Compare mismatched sequences YesNo

Picture Options for Separate Alignment Images
Picture size width height	Coloring mode Even Sparse Very sparse	Splitting block size No splitting 50 60 80 100 150 200 300 400 500	Weight matrices DNA/RNA Dayhoff Johnson Blosum 30 Blosum 50 Blosum 62 Pam 60 Pam 120 Pam 250 Gonnet 120 Gonnet 250 Gonnet 350
Picture types None All groups Max group at column Column values Column values (best-to-worst)		Color group type AUTO Protein Nucleotide	Add picture with selected groups N o n e 1: A G 2: C 3: D E N Q B Z 4: I L M V 5: F W Y 6: H 7: K R 8: P 9: S T 10: Others 11: Only gaps