... file . ... file log . ... find changesets by author, revision, files, or words in the commit message . ... author . ... 1 delta = 2.0 # for geometrical core building . 2 minsize = 20 # min size of returning cores . ... 5 # pdb download url (XXXX is pdb code place) . 6 pdb_url = 'http://www.pdb.org/pdb/files/ %s .pdb' . 7 pdb_dir = '/tmp/ %s .pdb' . ... 11 # min part or new atoms in new alternative core . ... 14 # max number of cores (including main core) . ...