Stochastic modeling of enhancer molecular configurations German Demidov St. Petersburg Academic University, 8/3 Khlopina Str., ... St. Petersburg, 195251 Russia gursky@math.ioffe.ru Eukaryotic gene expression is regulated via cis-regulatory modules (enhancers) in DNA, consisting of transcription factor binding sites (TFBSs) and their clusters. ... 2013) Transcription-factor binding and sliding on DNA studied using micro- and macroscopic models, PNAS, 110(49):19796­19801. ...

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• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/6.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/131.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/115.pdf

In our model for RNA secondary structure formation we assume that each of the candidate helices (see definition in the main text) may exist in two states. A helix can be completely zipped, or it can be completely decayed. ... The following schema is used to estimate the effective transition constants between zipped and decayed states: . ... To determine the kinetic constants, we use the transition state theory, which is often used in chemical kinetics (Figure 2). ... Transition . ...

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... To acquaint the reader with nonlinear dynamic systems; . ... The geology investigates of the Earth as a dynamic system. ... The analysis of behavior of systems with nonlinear interplay during time is a subject of this E-textbook. ... Key words: geological processes, dynamic system, nonlinear processes, chaotic dynamics, deterministic chaos, fractals. ... Chapter 1. ... For more information concerning the E-textbook "Dynamic processes in geology: Introduction to nonlinear systems" refer to the...

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• Professional experience of V.Zakharov

. Album : asv-album :: Travels to distant places and countries :: 1997/08 Kyoto, Nara (Japan) :: 25/08 Kyoto Botanical Garden . Up . << Prev . Model of the typical Japanese garden. Almost all details are present: moss, rocks, trees, stone lanterns, bamboo fence. Only pond is missing. Next >> . Album created by album a free tool by David Ljung on Tue Jun 23 14:46:26 2015 .

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• Index of /ftproot/pub/local/science/models/summary
• Publications
• Index of /ftproot/pub/local/science/models

1 Faculty of Physics, Moscow State University, Moscow 119899, Russia; 2 Soil Science Faculty, Moscow State University, Moscow 119899, Russia . ... To estimate soil response to acid deposition we compared the soil field data along a pollution gradient and simulated time effects. ... Time response of soils to acid deposition was evaluated with the SMART model. According to field observations there is no evidence for strong soil acidification effects close to the smelter. ...

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• LONG-TERM RESPONSE OF FOREST SOILS TO ACID DEPOSITION
• THEORETICAL PRINCIPLES AND METHODS OF REMEDIATION OF SOILS POLLUTED WITH HEAVY
• WEATHERING RATE AND SOIL SOLUTION CHEMISTRY

... Mathematical models and methods in VLSI design . ... General models and statements about the complexity of combinatorial tasks, methods for development of fast algorithms (method of dynamic programming, ?divide and conquer?, ?method of model extension?) are considered. ... Mathematical models of contemporary electronic circuits are considered and basic approaches to solving task of logic synthesis, as well as tasks of VLSI modules placement and interconnection routing are described. ...

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• Mathematical Models of Complex Systems: Theory, Algorithms, Applications |
• Master program "Mathematical Models of Complex Systems" | Магистерское и
• Master programљ"Decision Engineering in Economics and Finance" | Магистерское и

Search for Flavor Changing Neutral Currents in Single Top Quark Production -1 using 2. fb at D 3 Maxim Perfilov Moscow State University on behalf of the D0 Collaboration QFTHEP2010 , 2010 /09/14 Tevatron -396 ns between bunches - - has delivered about 9.2 fb since 2002 1 QFTHEP2010 , 2010 /09/14 2 FCNC models with soliton structure of the top quark Flavor Changing Neutral Currents change flavor of quarks without changing the charge models with ...

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• http://qfthep.sinp.msu.ru/talks/Bunichev_singletop_tWb_LHC.pdf
• http://qfthep.sinp.msu.ru/talks/QFTHEP-2010-PopovAV-1.pdf
• http://qfthep.sinp.msu.ru/talks2013/qfthep_anom_tW.pdf

. Выберите категорию обращения: Общие вопросы Отчеты Рейтинги Диссертационные советы Конкурсы Ввод данных Структура организаций Пользователи Проблемы с регистрацией\входом в систему . Тема обращения: . Описание проблемы: . Введите почтовый адрес: . Войти в систему . Регистрация . Главная . Поиск . Статистика . О проекте . Помощь . Издательство: Inderscience Publishers . Местоположение издательства: United Kingdom . ї 2011-2015 НИИ механики МГУ . Лаборатория 404. Все права защищены. обратная связь . Создать

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• Mathematical modelling of natural phenomena - журнал | ИСТИНА -
• Journal of Molecular Modeling - журнал | ИСТИНА - Интеллектуальная Система
• WIT transactions on modelling and simulation - журнал | ИСТИНА -

KEYWORDS: language evolution, mathematical modelling, branching processes . ... 2 Basic assumptions. ... Dying out, giving birth, and preserving of sign's meanings. ... Modelling of language evolution should be based on some assumptions concerning its micro-level, i.e. level of its micro-units' development. ... That is why it has become the starting point in the building of the mathematical model for the development in time and synchronic correlation of the whole system of a sign's features. ...

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• MSU-LGCLL:: Curriculum Vitae of Anatoliy Anatolyevich Polikarpov
• Large transportation networks with finite-dimensional state space. Asimptotic

... Data . ... Coronas-F . ... Solar energetic particles . ... Particle spectra at LEO . ... Spatial distributions of electrons with the energy 300-600 keV measured onboard CORONAS-F (2004-2005 years) and тАЬUniversitetsky-TatyanaтАЭ (2005-2006 years) satellites. Spatial distributions (geographical map) of trapped, quasi-trapped and precipitated electrons with the energy 300-600 keV measured on board CORONAS-F satellite in evening-night MLT sectors. ...

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• Scientific services - Space monitoring data center
• Particle distribution images (based on data from Coronas-F) - Space monitoring
• ShielDose2 model - Space monitoring data center

... ISO/IEC 10746-1: Basic Reference Model of Open Distributed Processing Part 1: Overview and Guide to the use of the Reference Model, July 1994. ... ISO/IEC 10746-2: Basic Reference Model of Open Distributed Processing Part 2: Descriptive Model, 1994. ... ISO/IEC 10746-3: Basic Reference Model of Open Distributed Processing Part 3: Prescriptive Model, February 1994. ... ISO/IEC 10746-4: Basic Reference Model of Open Distributed Processing Part 4: Architectural Semantics, 1994. ...

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• The Apache TPF Port
• Subtyping

Buffer phenomenon in mathematical mo dels of natural sciences Mishchenko E. F. Steklov Institute of Mathematics, Russian Academy of Science e-mail: mishch@mi.ras.ru Kolesov A. Yu. Demidov Yaroslavl State University e-mail: kolesov@uniyar.ac.ru Rozov N. Kh. ... 3] Kolesov A.Yu., Mishchenko E.F., and Rozov N.Kh., ... Math., ... 6] Kolesov A.Yu., and Rozov N.Kh., ... The Buffer Phenomenon in Combustion Theory", Dokl. ... 13] Mishchenko E.F., Sadovnichii V.A., Kolesov A.Yu., and Rozov N.Kh., ...

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... Problems and tasks of the research programme< . ... Laboratory-chair of modelling the natural references of time . ... To indicate the natural references of time and to discuss the consequences of their existence is one of the important tasks of the research programme suggested. ... The equations of motion, representing the basic content of a dynamical theory, are actually a description of the variability objects of interest for the researcher as compared with reference variability (the clocks). ...

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• O.S.Razumovsky. Models of Time in Physics and Cosmology
• Russian Interdisciplinary Temporology Seminar
• Крейдик Л.Г. (L. G. Kreidik)

О лаборатории . ... Лаборатория теоретической биофизики . Published in Февраль 8th, 2016 . Posted by comcon1 in Без рубрики . ... ERG group members work with different types of molecules and consequently added new atomtypes into classical OPLS-AA distributed with GROMACS. Now the ERG patch of OPLS-AA force field is published at bitbucket as a repository. continue reading.. ... Published in Май 19th, 2015 . ... comcon1 in All-atom automatic OPLS-AA topology? . ... 2014 ERG Research Group . ...

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• Lipid membrane MD modeling with GROMACS ERG Research Group: Лаборатория
• topology ERG Research Group: Лаборатория теоретической биофизики
• membrane ERG Research Group: Лаборатория теоретической биофизики

... Paradigm shifts by Kuhn: successive change of one model by another, rather than integration of different paradigms Progress of science: from single- to multi-model approach Some examples from natural science... · theory of light: from vibration of ether to wave-particle duality · laws of motion: from Newton's dynamics to SchrЖdinger 's and Heisenberg's formalism In social and environmental sciences appreciation of the multi-model ...

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... Structure Z-scores, positive is better than average: 1st generation packing quality : -3.884 (poor) Ramachandran plot appearance : -2.523 chi-1/chi-2 rotamer normality : -4.230 (bad) Backbone conformation : -4.982 (bad) RMS Z-scores, should be close to 1.0: Bond lengths : 0.946 Bond angles : 1.326 Omega angle restraints : 0.858 Side chain planarity : 0.559 (tight) Improper dihedral distribution : 0.999 Inside/Outside distribution : 1.206 (unusual) 2 структура: . ...

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• Task 6, Pfam
• Гомологичное моделирование
• Второй семестр

... The distribution license of software should not be worse than the distribution license of training materials. ... Training of specialists in software development is impossible without studying software development; moreover, it should be based on real software rather than on examples . ... Цена ошибки и требования к инструменту в образовании с общественной точки зрения крайне высоки, поэтому необходим открытый общественный механизм, управляющий разработкой ПО. ...

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• Meetings/Murray - UNИX
• Index of /static/AltDocs_informatika2/Book2/ch_09_model/01_model
• Index of /static/AltDocs_informatika2/Book2/ch_09_model/01_model/02_life

... Biological Faculty . Moscow State Lomonosov University . ... EDUCATION : B.S. Lomonosov Moscow State University, 1971 Physics . M.S. Lomonosov Moscow State University, 1972 Biophysics . Ph.D. Lomonosov Moscow State University, 1978 Biophysics . ... Lomonosov Moscow State University, 1990 Biophysics . ... 1972-1978 Research assistant Lomonosov State University, Moscow . ... Mathematical modelling in biology, . ... Lecturer at Biological Faculty, Lomonosov State University, Moscow . ...

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Mathematical modeling of biophysical processes in living cells and tissues . duration 6 months . ... 7(095) 939-26-12, Fax: +7(095)939-31-13, Email: romanov@yumr.phys.msu.ru . ... Interaction of femtosecond laser pulses with plasmas of modified targets . ... Theoretical investigations of polarization self-action and wave-interaction effects in nonlinear optics. ... Alexander V. Priezzhev, Associate Professor, Candidate of Sciences (physics and mathematics), Tel. ...

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• Postdoctoral training of foreign scientists at Physical Department

Mikhail V. Basilevsky, Fedor V. Grigoriev, Ekaterina A. Nikitina, Jerzy Leszczynski. Implicit electrostatic solvent model with continuous dielectric permittivity function. J. Phys. Chem. B. 2010. V. 114, P. 2457-2466 . The modification of the electrostatic continuum solvent model considered in the present work is based on the exact solution of the Poisson equation, which can be constructed provided that the dielectric permittivity ? ...

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• Stepanenko, V.M., S. Goyette, A. Martynov, M. Perroud, X. Fang, and D. Mironov.
• N.L. Gol'dman. Inverse Stefan Problems
• Stepanenko, V. M., Martynov, A., Johnk, K. D., Subin, Z. M., Perroud, M., Fang,