... Recommended values . Start word length . Start length of motiff for Multiple sequence alignment. ... Max N Mismatches . ... Min score . ... Gap parameter . This parameter defines gap scoring. the grater this value is the stronger gap will be panalysed . ... If inforation content of a column is less than given value the column should be not included into alignment. the grater this value is the stronger gap will be panalysed . ... Max loop . Max energy of a helix . ... cgcatagctc cacca . ...

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• input
• SDPsite - Algorithm Format requirements

... Perturbation Theory has a long tradition. ... The stability of an equilibrium (or periodic) state of a system depends in the first instance on the eigenvalues of the system linearized about that state. ... After an introductory chapter on stability theory, a long Chapter 2 deals with bifurcation analysis of eigenvalues of matrices depending on several parameters: this is the core of the book on which most of the rest depends. ...

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• Multiparameter Stability Theory with Mechanical Applications

ACPLT/KS . ACPLT/KS is an ongoing effort to develop an open and free communication system for the purposes of process control and process control engineering. ACPLT/KS provides easy access in heterogeneous system environments not only to process data and parameters, but also to archived time series and message logs. ... None . ... User Comments: . ... SAL Home | Other Scientific Fields | Misc . Comments? SAL@KachinaTech.COM . Copyright 1995-2001 by Herng-Jeng Jou . ...

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• SAL- Other Scientific Fields - Physics Astronomy - XMPA/ZORTEP
• SAL- Other Scientific Fields - Chemistry, Biology Related - ORTEP-III
• SAL- Mathematics - Statistics -- GLISREL

... Instructions are in README.TXT file inside the tarball. ... tar -xvf nhunt_x86.tar Query and database files should contain sequences in FASTA format ( wikipedia description ). ... Default name of the output file is 'nhunt.out'. ... Any parameter consists of key and value and is called as '-key value', where 'key' is one character and 'value' is any number of characters. -i Query file . ... No default value. -d Database file . ... No default value. -o Output file . ... Default value: 'nhunt.out' . ...

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О лаборатории . ... Лаборатория теоретической биофизики . ... OPLS-AA topology generation is a very complex task because of huge amount of the atomtypes described this force field. ... We use OPLS-AA with some includings; ?includings? are overlays on the standart GROMACS forcefield files. ... All-atom automatic OPLS-AA topology generator . ... comcon1 in All-atom automatic OPLS-AA topology? . ... OPLS-AA? in All-atom automatic OPLS-AA topology? ... 2011 ERG Research Group . ...

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• Using RESP with GAMESS-US and Firefly (PC-GAMESS) ERG Research Group:
• All-atom automatic OPLS-AA topology generator ERG Research Group: Лаборатория

... To define in detail the molecular mechanism of NAD+-dependent formate dehydrogenase, the pH dependences of various kinetic and spectroscopic parameters have been studied: Vmax, Km (NAD+), Km (formate), inhibition constants for structural analogues of substrate (NO3-) and product (CNS-, CNO-, N3-), CD and fluorescence properties. The value of Vmax, rate-limiting hydride transfer, is nearly constant throughout the entire pH range of enzyme stability (6.0-11.2) but decreases below 6. ...

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... 1.2 Free-electron lasers . 1.3 Historical development of the XFEL . References . ... 2.3.5 Experience form the first user operation periods . ... 3 General layout of the XFEL Facility . ... 3.4 Beam distribution system . ... 4 XFEL ccelerator . ... 4.4.2 Space charge and coherent synchrotron radiation effects . ... 4.8.2 Layout of the XFEL synchronisation system. ... 5.1.1 Principles of XFEL operation . 5.1.2 Design criteria for the European XFEL . ... 6.1 Overview of the X-ray systems . ...

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... DEPRON device (Dosimeter of Electrons, PROtons and Neutrons) is intended for the measurements ofљ the absorbed doses and linear energy transfer spectra from high-energy electrons, protons and nuclei of space radiation, and for detecting of thermal and slow neutrons flux. ... Charged particles dosimeter based on semiconductor detector . ... For each detected particle an amplitude of impulse proportional to the energy lost by the particle in the detector?s track sensitive volume is registered. ...

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• ELFIN-L | Университетский спутник "Ломоносов"
• Information unit (BI) | Университетский спутник "Ломоносов"
• TUS | Университетский спутник "Ломоносов"

Identifiability analysis and predictive power of the gene circuit model Ekaterina Myasnikova St.Petersburg State Polytechnical University, 29 Politekhnicheskaya, 195251, St.Petersburg, Russia, e-mail: myasnikova@spbcas.ru The correct prediction of system behavior is a necessary property of a mathematical model that is largely determined by the identifiability of model parameters. The number of parameters that are estimated by fitting to experimental data is typically large. ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/79.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/16.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/98.pdf

Preliminary results of astroclimate parameters measurements at the Sternberg 2.5m telescope installation site V.Kornilov, N.Shatsky, S.Potanin, O.Voziakova, B.Safonov Moscow, 2008 Acknowledgements A.Belinskiy M.Kornilov A.Tokovinin M.Kuznetsov P.Kortunov E.Gorbovskoy SAI administration some SAI students Pulkovo solar station (KHSS) staff RFBR support MAVEG Gmbh Why to study optical turbulence and some other relevant ... Mean seeing by DIMM data for this night is 1''5. ...

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• . The . MASS . Group .

June 30, 2015 . ... 10.00-11.25 Chair: I.Volobuev . ... Boris Arbuzov (SINP MSU, Russia) . ... Latest Physics Results from the AMS Experiment . ... Leonid Gladilin (SINP MSU, Russia) . ... 17.30 - 19.10 Parallel section A: Collider physics Chair: L. Dudko . ... L. Gladilin (SINP MSU, Russia) . ... S. Serednyakov (Budker Institute of Nuclear Physics, Russia) . ... M. Matveev (Petersburg Nuclear Physics Institute, Russia) . ... V. Yazkov (SINP MSU, Russia) . ... M. Platonova (SINP MSU, Russia) . ...

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EFFECTIVE FIELD THEORY FOR PHASE TRANSITION OF PROTEIN MACROMOLECULE INDUCED BY FORCE Meilikhov E.Z., Farzetdinova R.M. Kurchatov Institute, Kurchatov Sq., ... Our aim is to describe analytically the process of protein mechanical unfolding. ... We have studied (in the framework of the effective field theory) the phase transition of a protein macromolecule from the elastic state to the plastic one, which arises from mechanical stretching. ...

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• http://www.mce.biophys.msu.ru/archive/doc101227/eng.pdf
• http://www.mce.biophys.msu.ru/archive/doc24959/eng.pdf
• http://www.mce.biophys.msu.ru/archive/doc150572/eng.pdf

... This gropup of options allows You to change the following speech recording parameters: . ... This gropup of options allows You to change the following parameters of linear prediction: coefficients calculation: . ... This gropup of options allows You to change the following speech processing parameters: . ... This gropup of options allows You to change the following speech recognition parameters: . ... This gropup of options allows You to change the following speech detection parameters: . ...

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• Options
• General Information

... 3 Basic «metaphisics» Systemic nature of morphological disparity (BD) BD structure is interrelation among BD forms Structural approach to BD investigation implies analysis of interrelations among BD forms Systemic nature of BD presumes that interrelations among BD forms are in part causal At least some of BD forms could constitute a part of causulities affecting certain properties of some other BD forms 4 Basic «metaphisics» ...

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• The spermatozoa structure peculiarities of the subgenus Sumeriomys (Rodentia,
• Geographic variation of skull traits in the Libyan jird, Meriones libycus

... CompHEP Models. ... CompHEP is based on an idea of the physical model. ComHEP Models are very simular to physical models in high energy physics, like Standards Model or MSSM. ... Two of them are versions of the Standard Model (SU(3)xSU(2)xU(1)) in the unitary and t'Hooft - Feynman gauges. ... Standard Model in Feynman gauge . ... This output can be written in LaTeX format and in the form of CompHEP model files, which allows one to start calculations of processes in the new physical model. ...

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Lebedeva O. S. Tensor conjugate-gradient-type method for Rayleigh quotient minimization in block QTT format. Russian journal of numerical analysis and mathematical modelling, 26 (5), pp. 465-489, 2011. ... The tensor method has been implemented in the block QTT-format on the base of the block conjugate gradient method. ... Ключевые слова: tensor train format, quantics tensor train format, block tensor train format, low-parametric representations, block conjugate gradient method. ...

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• Haiqing Xu, Yu Gao, Hongqi Zhang, Takashi Sakurai, Masaoki Hagino, D. Sokoloff,
• Arshakian T. G., Stepanov R., Beck R., Krause M., Sokoloff D. Simulations of
• V.V.Pipin, D.D.Sokoloff, I.G. Usoskin, Variations of the solar cycle profile in

DVM-system of parallel program development . Goals and structure . ... 2.1 C-DVM and Fortran DVM parallel program development . ... Using C-DVM and Fortran-DVM languages a programmer deals with the only version of the program both for sequential and parallel execution. ... These rules are syntactically organized in such a manner that they are "transparent" for standard C and Fortran compilers and doesn't prevent DVM-program execution and debugging on workstations as usual sequential program. ...

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• Библиотека Lib-DVM. Детальный дизайн. Часть 3 (12.16 - 12.18)
• Lib-DVM library. Detailed design. Part 3 (12.16-12.18)
• Lib-DVM. Detailed design

Core information (Nucleus, Levels, Gamma transition, Decays, Data type) . ... any adopted (levels and gammas only) experimental . ... Query parameters: . Select for output . ... Levels (E, JPI, T1/2, etc.) ... Energy (keV) . ... Y D H M S MS US NS PS FS AS EV KEV MEV or Stable . ... Energy of the ?-ray (keV) . Relative photon intensity . ... Energy parameters of nucleus (B , Alpha energy, N, P separation energy) . ... Neutron separation energy (keV) . Proton separation energy (keV) . ...

59. http://acat02.sinp.msu.ru/presentations/morhac/ACAT2002_Morhac_ID142.pdf

60. Passing arguments to the shell