External modules for the Gibbs program The Gibbs program has several built-in non-ideality models which can be used for the calculation of activity coefficients for real solutions: the extended Debye-HЭckel model for aqueous solutions, the modified Peng- Robinson model for gaseous (or liquid) solutions, the Non-Random-Two-Liquid model for liquid solutions, the Mixing-on-Sites model for solid solutions, Subregular and Redlich-Kister models for solid and liquid solutions. ... Attach external modules). ...

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A program for alignment of structures of DNA-protein complexes . ... Help . ... StructAlign is a program for alignment of DNA-protein complexes' structures. The program gets a pair of complexes of DNA double helix with proteins in PDB-format and optionaly names of protein chains and outputs an alignment of DNA chains corresponding to the best spatial fit of protein chains also in PDB-format. ... X-axis is directed from P atom to C1' atom. ...

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In our model for RNA secondary structure formation we assume that each of the candidate helices (see definition in the main text) may exist in two states. A helix can be completely zipped, or it can be completely decayed. ... The following schema is used to estimate the effective transition constants between zipped and decayed states: . ... To determine the kinetic constants, we use the transition state theory, which is often used in chemical kinetics (Figure 2). ... Transition . ...

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О лаборатории . ... Лаборатория теоретической биофизики . ... In our previous article (<a href=? http://erg.biophys.msu.ru/wordpress/archives/706 ? ... Here we generalize this technique for the љtwo-dimensional space. ... Let us demonstrate how the discrete Laplacian is used in explicit scheme of solving the reaction-diffusion system . ... Нет комментариев " Reaction-diffusion systems in 2D space with python " . ... Reaction-diffusion systems in 2D space with python . ... 2016 ERG Research Group . ...

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... Программа вычисления обратных матриц на Фортране double precision ua( 3, 3 ), e( 3, 3 ) d = 2. c = 1. n = 3 call ais5d( d, c, n, ua, ierr ) write(*,33) d, c, n, ierr , ua 33 FORMAT(2x,'d, c, n, ierr , ua', 2X, 2E12.4, 2I4,/(3E12.4/)) do 2 i = 1, n do 1 j = 1, n if( i .eq. 1) e( i, j ) = d*ua(i,j) + c*ua(i+1,j) if( i .eq. n) e( i, j ) = c*ua(i-1,j) + d*ua(i,j) if( i .ne. 1 .and. i .ne. n) 1 e( i, j ) = c*ua(i-1,j) + d*ua(i,j) + c*ua(i+1,j) 1 continue 2 ...

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... Reports on progress and error are always recorded in the log file of the program. ... UT date of the measurement finish in YYYY-MM-DD format UT time of the measurement finish in hh:mm:ss format Average flux in A aperture Average flux in B aperture Average flux in C aperture Average flux in D aperture Normalized variance of flux in A aperture Normalized variance of flux in B aperture Normalized variance of flux in C aperture Normalized variance of flux in D ...

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... 17, No. 10 (2007) 3603­3606 c World Scientific Publishing Company STABILIZATION OF CHAOTIC BEHAVIOR IN THE RESTRICTED THREE-BODY PROBLEM ARSEN DZHANOEV and ALEXANDER LOSKUTOV Physics Department, Moscow State University, Leninskie Gory, Moscow 119992, Russia janoev@pol ly.phys.msu.ru Loskutov@chaos.phys.msu.ru Received Octob er 19, 2005; Revised February 20, 2006 The restricted three-bo dy problem on the example of a perturbed Sitnikov case is considered. ... The Sitnikov problem. ... Fig. ...

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