... 4.3 Scoring Matrices A two-dimensional matrix containing all possible pair-wise amino acid scores is called a scoring matrix. Scoring matrices are also called substitution matrices because the scores represent relative rates of evolutionary substitutions. Scoring matrices are evolution in a nutshell. ... 4.3.1 PAM and BLOSUM Matrices Two different kinds of amino acid scoring matrices, PAM (Percent Accepted Mutation) and BLOSUM (BLOcks SUbstitution Matrix), are in wide use. ...

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The evolutionary space of bacterial 16S rRNA gene I. Korvigo1, E. Pershina1, A. Igolkina1, A. Dolnik2, G. Tamazyan2, Y. Porozov3 1All-Rus sia Research Institute for Agricultural Microbiology, St. Petersburg, Russia, ilia.korvigo@gmail.com E. Andronov 2Saint 3St. ... Unequal rates of direct and reverse evolution lead to sequence's space inflation up to a functional boundary of the sequence. classification system where different states of a sequence could be unambiguously mapped in constant time. ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/148.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/155.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/26.pdf

... Criteria of branch quality . As it was repeatedly told , phylogenetic trees consist from branches. ... I. e., those positions, which can separate sequences of the branch from other sequences in the alignment. ... Measure of branch separation . ... Here and further: A - branch of the tree, i , j - sequences of alignment . ... That's why number of conserved positions in some branch should be considered in complex with the distribution of conserved positions in the whole alignment. ...

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• About this project

Next: The Scenario Machine: Operational Up: Evolution of Magnetic Rotators Previous: Ejector-propeller hysteresis . ... The length of this segment is determined by the eccentricity. ... In this case no hysteresis occurs and transitions E -- P and the reverse take place in symmetrical points of the orbit. ... Here EP means a mixed state of the rotator at which it is in the ejector state during one part of the orbit, and in the propeller state during the rest of the orbital cycle. ...

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• Effect of sources evolution on
• Ejector-propeller hysteresis
• Massive X-ray Binaries

Электронная библиотека Попечительского совета . ... Gascuel O. (ed.), Steel M. (ed.) - Reconstructing Evolution: New Mathematical and Computational Advances . ... Название: Reconstructing Evolution: New Mathematical and Computational Advances . Авторы: Gascuel O. (ed.), Steel M. (ed.) . ... Understanding and reconstructing evolution is of major importance in numerous subfields of biology. ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Koonin E.V., Galperin M.Y. - Sequence - Evolution - Function: Computational
• Volkenstein M.V. - Physical approaches to biological evolution :: Электронная
• Yoshikazu Giga - Surface Evolution Equations: A Level Set Approach ::

... Войти в систему . ... J. , Vasil?eva E.D. , Zogaris S. , Shumka S. , Hala?ka K. , Vete?n?k L. , ?v?tora M. , Nowak M. , Stefanov T. , Ko??o J. , Mendel J. в журнале Molecular Phylogenetics and Evolution , издательство Academic Press (United States) , том 94, с. 479-491 DOI . ... Lemos de Matos Ana , Areal Helena , Lissovsky Andrey A. , Carneiro Miguel , Esteves Pedro J. в журнале Molecular Phylogenetics and Evolution , издательство Academic Press (United States) , том 84, с. 240-244 DOI . ...

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• Journal of Molecular Evolution - журнал | ИСТИНА - Интеллектуальная Система
• Journal of Human Evolution - журнал | ИСТИНА - Интеллектуальная Система
• Plant Systematics and Evolution - журнал | ИСТИНА - Интеллектуальная Система

... Small islands and islets in the Kandalaksha Bay of the Russian White Sea are now rising. ... We tried to find plant species that are polymorphic enough to show the differences between the mainland and island populations and the populations from the different islands. ... Species of Carex ( C. salina and C. aquatilis groups), Euphrasia, Achillea, Rhodiola, Atriplex and Parnassia were chosen for preliminary morphological analysis (~ 2200 plants were measured). ...

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• Flowers: Diversity, Development and Evolution

... WORKSHOP "STELLAR ATMOSPHERES" . THE CHEMICAL AND DYNAMIC EVOLUTION OF STARS AND GALAXIES" . ... Chernomorka , Odessa , Ukraine . ... Modeling and interpretation of the stellar spectra of the usual and peculiar stars. Elemental abundances in the stars of different types and populations of the Galaxy. Chemical evolution of the stars and galaxies. ... Andrievsky S.M. (OAO ONU, Odessa, Ukraine) . ... CHEMICAL and DYNAMIC EVOLUTION STARS and GALAXIES" . ... Odessa mailto:astro@paco.odessa.ua . ...

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... Sequence design of bioinspired copolymers with functionality on the nano-metre scale . Co-ordinator - Professor H.Tenhu . We adopt a biomimetic approach to design sequences in synthetic copolymers. ... 1) to undertake a detailed investigation of a number of methods to design non-random sequences of monomer units in copolymers with special emphasis on biomimetic approaches; . ... Professor . ... University of Helsinki, Department of Chemistry, . ... Moscow State University . ... RUSSIA . ...

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... Архив семинаров . Авторы докладов . ... Послать приглашение на семинар . ... http://faculty.etsu.edu/yampolsky/ . ... Amino acid Exchangeability. Not all amino acid substitutions are made equal. ... Combining these data in a single amino acid substitution matrix allows to address some interesting questions bout protein evolution. ... Comparison of amino acid substitution patterns in proteins under different strength of stabilizing selection. ... Yampolsky. ... Научные семинары | ...

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• Welcome to A.N. Severtsov Institute of Ecology and Evolution
• A.N. Severtsov Institute of Ecology and Evolution (IPEE RAS): News: News: New
• A.N. Severtsov Institute of Ecology and Evolution (IPEE RAS): News: News:

Mathematical modeling of the 3D evolution problem for the interface between liquids of different viscosity and density in a uniform and infinite soil" . Nikolsky D.N. The three-dimensional evolution problem for the interface between liquids of different viscosity and density is formulated for the case of piston displacement. ...

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• "The Fortran programming language evolution (1957-2007) and the prospects of
• "Development of an efficient parallel Poisson equation solver for the

... 2007 March 5 . Illusion and Evolution in Galaxy Cluster Abell 2667 . ... Explanation: What's happening to the galaxies of cluster Abell 2667? ... To start, most of the yellowish objects in the above image from the Hubble Space Telescope are galactic members of a massive cluster of galaxies known as Abell 2667 . ... Light from this galaxy is gravitationally lensed by Abell 2667, appearing much like a distant person would appear through a wine glass. ... About APOD | ...

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• APOD: 2012 March 20 - Evolution of the Moon
• APOD: 2004 December 30 - M81 and M82: GALEX Full Field
• APOD: 2000 September 26 - Approaching Jupiter

A very important stage in a story of formation of any new science is the shift from discussion of situation which are possible but do not occur in practice due to some reason to recognition of real phenomena of interest. ... We suggest to consider computer viruses as this new specific form of life which is coming in the contact with our form of life. ... Computer life has been created by human being, the role of independent evolution of computer viruses seems to be still negligible. ...

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• http://lnfm1.sai.msu.ru/SETI/koi/bulletin/12/ksan.html
• Публикации Н.А.Соловой

... A.V. Eliseev . ... V.V. Adushkin, A.V. Vityazev, D.O. Glazachev, G.V. Pechernikova . Exogenous factors in the evolution of the Earth. ... Cosmic rays as a factor of biospheric evolution . ... A.V. Yakushev, N.A. Churilin, V.S. Soina, A.G. Kudinova, E.A. Vorobyova, N.S. Mergelov . ...

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• IAC, Evolution of Galaxies, Conference

... In the region of ferroelectric phase transition of Rb 2 ZnCl 4 crystals, the relaxation of incommensurate (soliton) structure (IS) transferred abruptly to a nonequilibrium state with uniaxial mechanical stress G has been studied. The evolution of IS was recorded by recording changes in the dielectric constant E along the Y axis. ... As a result the E, t-curves corresponding to different initial states intersect and further they follow again the time logarithmic law. ...

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... The approach for estimation of the homology search program sensitivity in nucleotide case was proposed in paper I.Anderson, A.Brass , "Searching DNA databases for similarities to DNA sequences: when is a match significant?" ... Seven sequences were chosen to have length varying from 100 to 1000 bp. ... Each of the 1000 artificially evolved sequences was used as a query for database search with Genebee search, blast-2.0.8 and fasta-3.3 as search engine. ... Sequence length . ... 100 . ... Blast 2.0 ....

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• GeneBee BLAST 2.2.8 Services Help
• GeneBee BLAST 2.2.22+ Services Help
• DIMACS Series in Discrete Mathematics

High Energy Physics and Quantum Field Theory XXI International Workshop Saint Petersburg Area, June 23­30, 2013 The Influence Functional approach to the quantum systems dynamics Alexander Biryukov, Mark Shleenkov Samara State University The paper structure 1. Model QS+EMF 2. ... Quantum transition probability as a paths integral of real functional 5. ... Quantum transition probability as a paths sum of real functional The energy representation is more convenient for numerical calculations. ...

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• http://qfthep.sinp.msu.ru/talks/QFTHEP2010Dolgopolov.pdf
• http://qfthep.sinp.msu.ru/talks/qfthep2010_dubinin.pdf

The в??developmental conduitв?? of the tribe Microtini (Rodentia, Arvicolinae): Systematic and evolutionary aspects . ... P.104-118 [in Russian, with English summary]. ... Anatomy of the arvicoline radiation (Rodentia): palaeogeographical, palaeoecological history and evolutionary data // Annales Zoologici Fennici. ... Molecular phylogeny of the speciose vole genus Microtus (Arvicolinae, Rodentia) inferred from mitochondrial DNA sequences // Molecular Phylogenetics and Evolution. ...

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• Genetic and cytogenetic variation of African root-rats Tachyoryctes splendens
• Epigenetic variation of the common shrew, Sorex araneus, in different habitats
• A preliminary study on molecular phylogeny of giant flying squirrels, genus

... Evolution 2.24 User Guide . ... Backing Up And Restoring Evolution . ... With the Backup and Restore plug-in enabled, you can successfully back up Evolution to your machine and restore it whenever it is required. The backup saves your Evolution gconf settings, mail, contacts, tasks, memos, and calendars and creates an archive. Select File > Backup Settings to select the folder where you want to save the backup. ... Select File > Restore Settings to open the available evolution.tar.gz files. ...

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• PspoMaterials/LibraryGnomeOrg_Evolution - UNИX
• Evolution 2.24 User Guide
• LDAP: Общая адресная книга в сети

Russian Interdisciplinary . Temporology Seminar: . ... Journals about time . ... 1 October, Tuesday . ... Physical models of torsion fields, making it possible to describe their action upon living matter, are considered. ... EVOLUTION WITHOUT SELECTION OR SELECTION BEFORE EVOLUTION?" ... The structure equality of energy and time in the action parameter, which is minimized on the trajectories of free uniform motion, inspires one to seek the conditions for their physical interchangeability. ...

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