... To implement this optimization methods supeimpose and save_pdb of alignment were replaced with methods with same names of sequence. ... 20 blocks = [] . 21 in_block = False . ... 24 in_block , was_in_block = is_good_window ( window ), in_block . 25 if in_block and not was_in_block : . ... Block . from_alignment ( alignment , columns = list ( window )) . ... 32 def blocks_markup ( alignment , blocks ): . ... in_block for column in alignment . ... 52 blocks_markup ( alignment , blocks ), . ...

Еще в разделе: (Показать все результаты (>39417) - kodomo.fbb.msu.ru/ )

• allpy: 835efa2a8c71 test/usecase1.py
• allpy: 835efa2a8c71 allpy/markups.py
• allpy: d137df18a8bf test/usecase1.py

... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

Еще в разделе: (Показать все результаты (>147) - bioinf.fbb.msu.ru/ )

• SDPsite
• Site Cluster

This home page belongs to small group of scientists working at . Sternberg Astronomical Institute which is a part of Moscow State University . ... Электронная библиотека научно-технической и художественной литературы (доступна только из ГАИШ) . ... Local staff . Dr. Edward Kononovich (konon -at- sai.msu.ru), Associate Professor . ... Dr. Sergey Ayukov (asv -at- sai.msu.ru), Research Fellow, Webmaster of the group . ... Joint seminar of Solar Studies Structure Group and Solar Photometry Group . ...

Еще в разделе: (Показать все результаты (>1010) - crydee.sai.msu.ru/ )

. Color Explanation . Red absolutely conservative a.a residues (i.e. 100% identity) . 80% identity . 60% identity . No color . Percentage of Conservative Residues within the Ligand Contact Area . 25/34 = 0.735 . Santesson Elly, 2004

Еще в разделе: (Показать все результаты (>5476) - kodomo.cmm.msu.ru/ )

• Structure Alignment
• Summary Table Sequence
• Global and Local Alignment of A.A Sequences

Next: SYSTEM CALL: msgget() Up: Internal and User Data Previous: Kernel msqid_ds structure . The kernel stores permission information for IPC objects in a structure of type ipc_perm . ... struct ipc_perm { key_t key; ushort uid; /* owner euid and egid */ ushort gid; ushort cuid; /* creator euid and egid */ ushort cgid; ushort mode; /* access modes see mode flags below */ ushort seq; /* slot usage sequence number */ }; . ... Finally, the slot usage sequence number is stored at the end. ...

Еще в разделе: (Показать все результаты (>183) - itpm.msu.su/ )

• Kernel semid_ds structure
• Internal and User Data Structures
• Internal Data Structures

... Research programm of the laboratory-chair< . ... Laboratory-chair of Discrete mechanics on a microscopic scale . ... Thus the structures of the physical world are not physical objects but physical processes. ... The primitive entity is called a material point. ... The value of the property “existence” of the material point varies from “the material point does not exist” to “the material point exists” by this process. ... Let call this structure a dynamical graph or a d-graph. ...

Еще в разделе: (Показать все результаты (>376) - chronos.msu.ru/ )

• Possibility of Controlling the Algal Community Structure in Laboratory

Additional topic data, program-generated or from TWikiForms , is stored embedded in the topic text using META: tags . ... Meta Data Syntax . Meta Data Specifications . ... META:FORM . ... By default, TWiki stores topics in files on disk, in a really simple and obvious directory structure. ... Order of fields within the meta variables is not defined, except that if there is a field with key name , this appears first for easier searching (note the order of the variables themselves is defined). ...

Еще в разделе: (Показать все результаты (>31447) - dualopt1.cmm.msu.ru/ )

... Войти в систему . ... Другие названия журнала: Int J Solids Struct , Int. J. Solids Structures , Inter. J. Solids Structures показать полностью.. ... J. Solids Structures , International Journal Solids and Structures . ... Levin V.A. , Zubov L.M. , Zingerman K.M. в журнале International Journal of Solids and Structures , издательство Pergamon Press Ltd. ... Tarasov V.E. в журнале International Journal of Solids and Structures , издательство Pergamon Press Ltd. ...

Еще в разделе: (Показать все результаты (>3907) - istina.msu.ru/ )

• Journal of Molecular Structure - журнал | ИСТИНА - Интеллектуальная Система
• Khomenko E.V. - сотрудник | ИСТИНА - Интеллектуальная Система Тематического
• Acta Crystallographica Section E: Structure Reports Online - журнал | ИСТИНА -

... The role of intrinsically disordered regions in the structure and functioning of small heat shock proteins. ... Curr Protein Pept Sci. ... Small heat shock proteins (sHsp) form a large ubiquitous family of proteins expressed in all phyla of living organisms. ... Thus, disordered N- and C-terminal sequences play important role in the structure, regulation and functioning of sHsp. ...

Еще в разделе: (Показать все результаты (>51) - biochem.bio.msu.ru/ )

• Molecular structure and dynamics of the dimeric human small heat shock protein
• Effect of mutations mimicking phosphorylation on the structure and properties
• Structure, properties, and probable physiological role of small heat shock

... Химического факультета МГУ . Спецкурсы кафедры химической энзимологии . Программа спецкурса . Биоинформатика - предмет и методы исследований, основные приложения. ... Математические основы выравнивания последовательностей символов. ... Поиск гомологичных последовательносткй ДНК/белков в базах данных. ... Современные методы предсказания вторичной и третичной структуры белков на основе первичной структуры. Метод моделирования по гомологиям. ... Стратегия моделирования структуры белков: . ...

Еще в разделе: (Показать все результаты (>702) - chem.msu.ru/ )

• Synthesis and Crystal Structure of Nitratocuprates(II) of Alkaline Metals and
• Laboratory of structure and quantum mechanics of molecules
• Moscow University Chemistry Bulletin Vol. 52, No. 3 (2011)

The existence of oceanic islands and seamounts is supposed to be the one of the main evidence of the plate tectonic theory. But there is no such acient geological object which could be so similar to rock complex of oceanic island. These structures must include the alkaline magmatism manifestation, sedimentary rocks close to recent riff limestone on the oceanic islands and sequence of terrigenic rocks. ... 100.00 . ... H 2 O calculated by the 100% norm of cations. d.l.. ...

Еще в разделе: (Показать все результаты (>712) - geo.web.ru/ )

• Bragg W. L. "The struct