... allpy/base.py allpy/pdb.py . ... allpy/base.py . ... 1.1 --- a/ allpy /base.py Wed Dec 15 19:19:11 2010 +0300 1.2 +++ b/ allpy /base.py Wed Dec 15 20:06:27 2010 +0300 1.3 @@ -135,32 +135,32 @@ 1.4 * source -- str denoting source of the sequence 1.5 1.6 Any of them may be empty (i.e. hold empty string) 1.7 + 1.8 + Class attributes: 1.9 + * monomer _type -- type of monomers in sequence , must be redefined when 1.10 + subclassing 1.11 1.12 1.13 - def __init__( self , monomers=None, name ='',...

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• allpy: fb3164f03984 lib/sequence.py
• allpy: 675b402094be lib/sequence.py
• allpy: allpy/base.py diff

RNA Tertiary Structure Modelling . ... Two steps to fold coarse-grained model of RNA tertiary structure . ... fill in RNA secondary structure form with CT format (also with pseudoknots); . ... push "Finish Step #1" button to obtain secondary and intermediate* structures. * intermediate structure is the structure with minimum of "free energy" contains formed helixes and stacking, but without tertiary interactions . RNA secondary structure form . ... some useful RNA secondary structure databases: . ...

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• %TOPICTITLE% (9 vs. 10) - TWiki

... DevHlp_Security This devhlp allows to open a file for read access in the Init routine of a BASEDEV . ... returned: size of file SYIOpenFile ends Valid at INIT time only. ... This routine uses the corresponding function of the miniFSD , not normal file I/O, thus access is restricted. ... Although the size argument of the data structure implies, I'd recommend to better not read more than 32K at a time. ... DL = 044h This function will return the table of security helper functions for file access. ...

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• Heliophysics, Internal structure and seismology
• Long description of example illustrating table row height calculations and

. General Information about the E.coli protein, DNA GyraseB . General Studies of the Protein Structure (PDB ID: 1ei1) . General description of the 3D structure . Description of Secondary Structure . Illustration of polypeptide contact areas between Amino Acid Residues and the Functional Ligand . ArginylSerylSerine . Meanless Findings on the web (class time tasks...and what the russian students do instead) . Chemical Element: Beryllium . What is a Parasaurolophus? . Santesson Elly, 2004

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• Changeset 6:721fdbb815c8 тАУ Cyclyc Cell Automata
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... Computer software has been developed for crystal chemistry analysis of arrangement of molecules in organic crystals on the basis of concepts worked out in the studies conducted by P.M.Zorky et al. ... The standard crystal chemistry analysis includes: . ... Constructing various graphic representations of the crystal structure and of its fragments, which clearly demonstrate arrangement of molecules, in particular, constructing representations of the most close molecule-molecule contacts. ...

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• Dielectric Properties and Molecular Structure of the Liquid Unsaturated
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• Supramolecular structure and physicochemical properties of the systems

... Class . ... Provides an abstraction for multidimensional array access, some concrete implementations, and ways to view a MultiArray as if it had a different structure. ... This interface defines the services required by MultiArrayProxy to manipulate indexes and the dimensions of a MultiArray. ... In the following, we use the unadorned term "array" to mean the Java language construct, and the term "multidimensional array" for the mathematical abstraction modeled by the MultiArray class in this...

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• ExtensionFileFilter
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... The software models the dynamics of RNA secondary structure by the means of kinetic analysis of folding transitions of a growing RNA molecule. The result of the modeling is a kinetic ensemble, i.e. a collection of RNA structures that are endowed with probabilities, which depend on time. ... 19, Moscow, 127994, Russia. ... Danilova, L.V., Pervouchine, D.D., Favorov, A.V., Mironov, A.A. (2006) RNAKinetics: a web server that models secondary structure kinetics of an elongating RNA. ...

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... Research programm of the laboratory-chair< . ... Laboratory-chair of Discrete mechanics on a microscopic scale . ... Thus the structures of the physical world are not physical objects but physical processes. ... The primitive entity is called a material point. ... The value of the property ?existence? of the material point varies from ?the material point does not exist? to ?the material point exists? by this process. ... Let call this structure a dynamical graph or a d-graph. ...

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• Laboratory-chair of causal mechanics
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Выберите категорию обращения: Общие вопросы Отчеты Рейтинги Диссертационные советы Конкурсы Ввод данных Структура организаций Пользователи Проблемы с регистрацией\входом в систему . ... Uvarova Y.A., Sokolova E., Hawthorne F.C. , Liferovich R.P. , Mitchell R.H. , Pekov I.V. , Zadov A.E. в журнале Mineralogical Magazine , издательство Mineralogical Society (United Kingdom) , том 74, с. 441-450 . ... Авторы: Якубович О.В. , Massa W. , Пеков И.В. , Liferovich R.P. 18th General Meeting of the Intern. ...

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• Atencio D. - сотрудник | ИСТИНА - Интеллектуальная Система Тематического
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Brain Research Group >> Research >> Change-point analysis ... << previous next >> . ... When detection of the change-points in alpha band power was performed as in the previous subsection, more than one change-point per second was obtained in average. ... The hypothesis of the hierarchy of EEG segmental descriptions (Kaplan 1998) (see subsection 7.3.2) is a theoretical reason for introducing the adjustment of the change-point detection probability. ...

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... Most HTML elements are identified in a document as a start tag, which gives the element name and attributes, followed by the content, followed by the end tag. ... To identify the document as being HTML 3.0, it is recommended that documents start with the prologue: <!doctype HTML public "-//W3O//DTD W3 HTML 3.0//EN"> . ... HTML 3.0 documents formally have the following structure: <HTML> <HEAD> head elements .. ... HTML> . ... The permitted syntax of HTML 3.0 compliant documents is specified by the...

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• Getting a description of each command
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HOW DOES CRYSTAL CHEMISTRY PREDICT STRUCTURE AND PROPERTIES OF CRYSTALS V. S. URUSOV Crystal chemistry has created a set of methods and procedures to predict structure and properties of crystals. ... З. л. мкмлйЗ еУТНУ,ТНЛИ ,,УТЫ ТЪ,ВММ?И ЫМЛ,В ТЛЪВЪ ЛП. е.З. гУПУМУТУ, © м ЫТУ, З.л., 1997 . ... мкмлйЗ З.л. дДд дкалнДггйпаеаь икЦСлдДбхЗДЦн лнкмднмкм.. ... 1 мкмлйЗ З.л. дДд дкалнДггйпаеаь икЦСлдДбхЗДЦн лнкмднмкм а лЗйвлнЗД дкалнДггйЗ 43 . ... Ti4+ 2 -, 1 : 2 , . 2 --2 - Ti4+-Ti4+) , (2 --Ti4+). ...

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• http://cryst.geol.msu.ru/staff/elbel.php

Shipunov A.B. Systema Naturae [Electronic resource]. 1995 onwards. ... Pyramid of kingdoms , in SVG . ... Systema Naturae or the outline of living world classification // Protistology. ... The classification has: (1) small number of kingdoms; (2) large phyla; (3) incorporating as much as possible taxonomical data from different sources. ... The classification utilizes all described groups of living organisms, excluding fossils and viruses, from kingdoms and down to the level of class. ...

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• Index of /shipunov/school/biol_250/mov

... Russian Pages . CDFE: Home Page . ... Numerical data, graphics, and bibliography . ... description] . Last updated: May 6th, 2014 . ... Last updated: June 15th, 2011 . ... Last updated: . ... Last updated: April 4th, 2015 . ... Last updated: February 25th, 2016 . ... Last updated: September 27th, 2011 . ... Photonuclear Data Index since 1955 . ... Last updated: September 15th, 2015 . ... Last updated: March 22th, 2010 . ... Last updated: March 19th, 2015 . ... Last updated: May 15th, 2002 . ...

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• CDFE => Online Services => Nuclear Reaction Threshold and Energy Values
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... This course is dedicated to the main principles, methods and techniques of parallel programming oriented at resolution of resource-intensive tasks physically and in non-linear optics in particular. The course offers profound description of popular techniques of parallel programming such as OpenMP and MPI. ... Rapid growth of productivity of the modern computing systems is achieved by using parallel processors and multicore systems. ... Antonov, A.S. Parallel Programming Using MPI. ...

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• FPGA Design

... One semid data structure for each set of semaphores in the system. */ struct semid_ds { struct ipc_perm sem_perm; /* permissions .. see ipc.h */ time_t sem_otime; /* last semop time */ time_t sem_ctime; /* last change time */ struct sem *sem_base; /* ptr to first semaphore in array */ struct wait_queue *eventn; struct wait_queue *eventz; struct sem_undo *undo; /* undo requests on this array */ ushort sem_nsems; /* no. of semaphores in array */ }; . ...

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... About lab . ... Online Journal "Computer graphics and multimedia" (in russian) . ... The documentation in Russian. ... These systems contain millions lines of code, thousands - tens of thousands classes. Visualization could help programmer to better comprehend these large systems, to orientate between lot of objects of these systems, to analyze intricate structure of code and find required information. ... Doc3D: Система трехмерной визуализации архитектуры программных систем . ...

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DESCRIPTION OF THE 3d SOLAR EVENT MAP . ... This date coincides with central day of the map marked by solid vertical line (in the present example - 13 July, 2000). ... The following phenomena are presented on the map: coronal holes, filaments, solar flares and the distribution of the solar magnetic field on the source surface (2.5 solar radii). The coronal holes are drawn by irregular solid curves with colors according to the day of observation (light blue, orange and violet). ...

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The first major global tomographic study was made by Professor Dziewonski in early 70's. The idea of this study was that the travel time anomalies observed for many ray paths, criss-crossing the Earth between various points near the Earth's surface and reaching different depths in its interior, could be resolved formally into a three-dimensional (3-D) model. ... How to use Harvard's 3-D Earth models? Now, you can download source codes in order to use Harvard's recent Earth models. ...

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... Invariant complex structures on generalized symmetric spaces Svjetlana TerziЄ c University of Montenegro joint work with Dieter Kotschick (LMU - Munich) 1 1. ... In particular, if H is centralizer of a torus in G than G/H admits an invariant almost complex structure. ... On the numb er of invariant (almost) complex structures Thm 4 (Borel-Hirzebruch) Isotropy representation for G/H decomp oses into t irreducible summands G/H admits exactly 2t invariant almost complex structures. ...

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