log . ... Thu, 17 Mar 2011 17:03:27 +0300 . boris (kodomo) . ... Daniil Alexeyevsky . ... Wed, 16 Mar 2011 22:50:50 +0300 . ... Fri, 04 Mar 2011 15:16:28 +0300 . ... Automated merge with ssh://kodomo/allpy . Mon, 28 Feb 2011 22:40:16 +0300 . ... allpy.processors: make temporary files named . Tue, 01 Mar 2011 00:17:13 +0300 . boris . ... Updated allpy/data/codes.py from fresh components.cif . ... Sat, 26 Feb 2011 18:59:48 +0300 . ... Sun, 27 Feb 2011 23:49:54 +0300 . ...

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S .. ... a database of structures of DNA-protein and RNA-protein complexes. ... a program for finding hydrophobic clusters in 3D structures of macromolecules . ... search of conserved hydrophobic clusters in aligned 3D structures of protein families . ... a program for analysis of multiple alignments . ... a program for automatic detection of aligned blocks in a multiple protein alignment. ... a program for detection of aligned blocks in a multiple alignment of sequences of PDB chains. ...

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• ETS sequence conservation

ChangeLog for / # # Generated by Trac 0.12.5 # 04/12/16 08:26:02 Mon, 20 Dec 2010 17:25:57 GMT Daniil Alexeyevsky <me.dendik@тАж> [44:759a040a5f94] * tk_ui.py (modified) Nicer welcome message (in tk_ui) Mon, 20 Dec 2010 17:20:22 GMT Daniil Alexeyevsky <me.dendik@тАж> [43:dd0574c45bb9] * body.py (modified) * game.py (modified) * tk_ui.py (modified) * vector.py (modified) Fixed file permissions. ...

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ChangeLog for / # # Generated by Trac 0.12.5 # 04/11/16 22:29:47 Mon, 20 Dec 2010 17:25:57 GMT Daniil Alexeyevsky <me.dendik@тАж> [44:759a040a5f94] * tk_ui.py (modified) Nicer welcome message (in tk_ui) Mon, 20 Dec 2010 17:20:22 GMT Daniil Alexeyevsky <me.dendik@тАж> [43:dd0574c45bb9] * body.py (modified) * game.py (modified) * tk_ui.py (modified) * vector.py (modified) Fixed file permissions. ...

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This home page belongs to small group of scientists working at . Sternberg Astronomical Institute which is a part of Moscow State University . ... Электронная библиотека научно-технической и художественной литературы (доступна только из ГАИШ) . ... Local staff . Dr. Edward Kononovich (konon -at- sai.msu.ru), Associate Professor . ... Dr. Sergey Ayukov (asv -at- sai.msu.ru), Research Fellow, Webmaster of the group . ... Joint seminar of Solar Studies Structure Group and Solar Photometry Group . ...

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Items Added in November & December, 1998: . Dataplore -- software tool for analysis of signals and time series data.[ ... Oberon V4 for GNU/Linux -- an implementation of Oberon V4 for Linux.[1998/12/29] . ... Nightfall -- interactive astronomy application for animated views of eclipsing binary stars.[ ... TAL -- an Eiffel OO library for technical analysis applications.[ ... C/Math Toolchest -- C/C++ library for scientific and engineering applications. ... SAL Home | New Items Page | ...

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• SAL -- Scientific Applications on Linux -- New Items Added in 2001/05 and
• SAL -- Scientific Applications on Linux -- New Items Added in 2000/03 and
• SAL -- Scientific Applications on Linux -- New Items Added in 1998/09 and

Электронная библиотека Попечительского совета . ... Heggins D., Taylor W. - Bioinformatics: Sequence, Structure and Databanks . ... Название: Bioinformatics: Sequence, Structure and Databanks . Авторы: Heggins D., Taylor W. Аннотация: . Bioinformatics covers practical important topics in the analysis of protein sequences and structures. ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Lathrop R.H., Rogers Jr R.G., Smith T.F. - A Bayes-optimal sequence-structure
• Peters C.A., Steenbrink J.H. - Mixed Hodge Structures :: Электронная библиотека
• Cohen L.W., Ehrlich G. - The Structure of the Real Number System :: Электронная

... The approach for estimation of the homology search program sensitivity in nucleotide case was proposed in paper I.Anderson, A.Brass , "Searching DNA databases for similarities to DNA sequences: when is a match significant?" ... Seven sequences were chosen to have length varying from 100 to 1000 bp. ... Each of the 1000 artificially evolved sequences was used as a query for database search with Genebee search, blast-2.0.8 and fasta-3.3 as search engine. ... Sequence length . ... 100 . ... Blast 2.0 ....

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• RNA secondary structure prediction
• Screening protein sequence against PROSITE databank
• Databases

Additional topic data, program-generated or from TWikiForms , is stored embedded in the topic text using META: tags . ... Meta Data Syntax . Meta Data Specifications . ... META:FORM . ... By default, TWiki stores topics in files on disk, in a really simple and obvious directory structure. ... Order of fields within the meta variables is not defined, except that if there is a field with key name , this appears first for easier searching (note the order of the variables themselves is defined). ...

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... 2011/12/09 . ... added alignment merging . added parameter corresponding to the width of output alignment . fixed homologue searching for very long query sequences . ... Copyright 2010-2011 Yury Pekov ...

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• ConClus

... Alternative core new atoms (%) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Geometrical core of a set of structures is a subset of alignment positions those atoms are disposed similarly in all structures. ... For any two positions included into geometrical core, the distances between CA atoms of those positions in all structures may differ not more than the value of the parameter "Distance spreading". ...

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• S : rm_systems
• wLake program homepage

... The LanHEP input file is the sequence of statements, each starts with a special identifier (such as parameter, lterm etc) and ends with the full-stop ' . ... This section is aimed to clarify the syntax of LanHEP input files, i.e. the structure of the statements. ... Let us consider the LanHEP input files for the Standard Model with both the t'Hooft-Feynman and unitary gauges. ... LanHEP allows the user to define several keys , and use these keys to branch among several variants of the model. ...

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• General structure
• MRS structure functions

... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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• SDPsite - PF07978
• SDPsite - PF01398
• SDPsite - PF01399

Astronomy Picture of the Day . ... 5.02.1996 . ... Credit Copyright: NASA , COBE , DMR , Four Year Sky Map Explanation: Above are two microwave images of the sky, looking north and south of our galaxy 's equator, based on data from NASA's COBE satellite. ... These spots are the oldest structures known - probably the oldest structures humanity will ever know. ... February 1996 . ... 1995 1996 . ... Publications with keywords: COBE - hotspots . ... Microwave Hotspots: The Oldest Structures Known ...

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• COBE Hotspots:The Oldest Structures Known
• Астронет > COBE Hotspots: The Oldest Structures Known
• Астронет > COBE Hotspots:The Oldest Structures Known

... История кафедры . ... младших курсов . ... Уважаемые студенты 1-го, 2-го и 3-го курсов! ... Семинар кафедры проходит по пятницам в 15.20 в комн. ... а также на стендах кафедры на 2-м и 4-м этажах. Информацию о более ранних событиях см. в разделе "Жизнь кафедры" . ... 119991, Москва, Ленинские горы, д.1, стр.2, МГУ имени М.В.Ломоносова, физический факультет, кафедра фотоники и физики микроволн . ...

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... Online Services | ... Construct your query and output by sequental openings of needed fields. One output field must be selected (not be blank) at least. ... Query parameters: . Select for output . ... Energy (keV) . ... Y D H M S MS US NS PS FS AS EV KEV MEV or Stable . ... Energy of the ?-ray (keV) . ... Energy parameters of nucleus (B , Alpha energy, N, P separation energy) . ... Neutron separation energy (keV) . Proton separation energy (keV) . ... Excited energy(keV) . ...

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... SYSTEM CALL : semop (); PROTOTYPE: int semop ( int semid, struct sembuf *sops, unsigned nsops); RETURNS: 0 on success (all operations performed) -1 on error: errno = E2BIG (nsops greater than max number ... EACCESS (permission denied) EAGAIN (IPC_NOWAIT asserted, operation could not go through) EFAULT (invalid address pointed to by sops argument ) EIDRM ( semaphore set was removed) EINTR (Signal received while sleeping) EINVAL ( ... The sops argument points to an array of type sembuf . ...

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• Kernel ipc_perm structure
• SYSTEM CALL: msgctl()
• Removing a user

Probing -directed structured elements detection in RNA sequences S.V. Vinogradova Moscow State University, Faculty of Bioengineering and Bioinformatics , 119991, Moscow , GSP-1, Leninskiye Gory, MSU, 1-73 kintany@gmail.com R.A. Soldatov Moscow State University, Faculty of Bioengineering and Bioinformatics , 119991, Moscow , GSP-1, Leninskiye Gory, MSU, 1-73 solrust@mail.ru M.A. Mironov ... 2013) Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo. ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/161.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/101.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/4.pdf

Enclosure structures of equal level line fields in the gradient filling problem" . Ivanov B.N. In this paper, the method of gradient filling of equal level line fields by color scale is considered. ... The root tree structure of equal level line enclosure is applied to the context analysis of all equal level line values in order to correctly specify the color values of their filling. A working algorithm of gradient filling of equal level lines is given. PostScript (in Russian) (2.67MB) . ...

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• "Routing on lattice-cellular structures"
• "Methods for automatic determining the efficiency of implementation of
• Composition of infinitary structures

... 5DPK structure . Page of complex: 5DPK . Home Browse Download Help About Us . ... PDB ID . ... MUTY ADENINE GLYCOSYLASE BOUND TO A TRANSITION STATE ANALOG (1N) PAIRED WITH D(8-OXOG) IN DUPLEXED DNA TO 2.2 A . ... View in . ... Protein chains: . DNA chains: . ... 5dpk.pdb1.pdb . ... Pfam domains . ... Download file with secondary structure created by Stride . 5dpk.pdb1.pdb: [ download sequences in FASTA format ] . ... Click "SHOW" for view sequence . ... NPIDB team 2003 - 2016 . ...

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• NPIDB: Home